Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 172 |
| Cds size | 171 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928646.9104314-CDS-H-canaliculatus_F_contig10180:170..256 | 1622928646.9104314-CDS-H-canaliculatus_F_contig10180:170..256 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10180 171..256 - |
| 1696845511.826207-CDS-H-canaliculatus_F_contig10180:170..256 | 1696845511.826207-CDS-H-canaliculatus_F_contig10180:170..256 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10180 171..256 - |
| 1622928646.9210844-CDS-H-canaliculatus_F_contig10180:282..367 | 1622928646.9210844-CDS-H-canaliculatus_F_contig10180:282..367 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10180 283..367 - |
| 1696845511.8426416-CDS-H-canaliculatus_F_contig10180:282..367 | 1696845511.8426416-CDS-H-canaliculatus_F_contig10180:282..367 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10180 283..367 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10180.204.1 >prot_H-canaliculatus_F_contig10180.204.1 ID=prot_H-canaliculatus_F_contig10180.204.1|Name=mRNA_H-canaliculatus_F_contig10180.204.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=57bp
VVAACRGRAVPPATVGDHALAPSSHRTDTLSSRSGELWAAGAAGGPRLDR
RVPPFSP back to topmRNA from alignment at H-canaliculatus_F_contig10180:171..367- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10180.204.1 ID=mRNA_H-canaliculatus_F_contig10180.204.1|Name=mRNA_H-canaliculatus_F_contig10180.204.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=197bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10180:171..367- (Hapterophycus canaliculatus Oshoro5f female)
GTCGTCGCGGCTTGCCGCGGTAGGGCTGTGCCGCCGGCAACCGTCGGCGA
TCACGCCCTAGCCCCGTCATCCCATCGGACCGACAGCACGAACATGTGGC
GTTTGGGCGAGCTCTATCGTCTCGTAGCGGCGAGCTGTGGGCGGCTGGAG
CTGCTGGAGGCCCGCGTTTGGATCGTCGAGTCCCGCCTTTCTCGCCT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10180:171..367- >mRNA_H-canaliculatus_F_contig10180.204.1 ID=mRNA_H-canaliculatus_F_contig10180.204.1|Name=mRNA_H-canaliculatus_F_contig10180.204.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=342bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10180:171..367- (Hapterophycus canaliculatus Oshoro5f female)
GTCGTCGCGGCTTGCCGCGGTAGGGCTGTGCCGCCGGCAACCGTCGGCGA
TCACGCCCTAGCCCCGTCATCCCATCGGACCGACAGTCGTCGCGGCTTGC
CGCGGTAGGGCTGTGCCGCCGGCAACCGTCGGCGATCACGCCCTAGCCCC
GTCATCCCATCGGACCGACACTCTATCGTCTCGTAGCGGCGAGCTGTGGG
CGGCTGGAGCTGCTGGAGGCCCGCGTTTGGATCGTCGAGTCCCGCCTTTC
TCGCCTCTCTATCGTCTCGTAGCGGCGAGCTGTGGGCGGCTGGAGCTGCT
GGAGGCCCGCGTTTGGATCGTCGAGTCCCGCCTTTCTCGCCT back to top
|