mRNA_H-canaliculatus_F_contig10171.199.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI) HSP 1 Score: 382 bits (981), Expect = 1.720e-116 Identity = 205/409 (50.12%), Postives = 274/409 (66.99%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISLLAVQELR 1229 CA CA+ Y+ G YTCS+C RR T A +V+L +A + V + Y+ + +E++ AA R + +R R RS +Q KII+VSWQI++QF SVASVTYP LY +F+ +ID ++LD+AW LS C + T+FY +LL TIGP+ V+ LVL S R C A D +R S +RHA I+ ISFLVYS+ S+ +FQTF CDD+D G SFLRVD+ +QC T +H+G+M YAG M +VYP GIP Y L+ AR KS ++A+ VL+ LW+PY++ YYYEVVECFRRV LSGLV+F+LPNTAGQ+ T FLLS+ FF +F +LDPY HR TWL IGHA VM+S+F + KVDV DD FSQ+VF+ L+ A+ + + + EA W+ VQE+R Sbjct: 621 CAECAEDYSLGP-GYTCSECDEDRRKWTTAA-AVILXVAAAVAVTVSVGYLGAPTEES-----AAARIPSLVRERFGRSWVSQGFKIIIVSWQIVSQFASVASVTYPDLYATFVGFIDFLDLDVAWTLSVDCWVGTNFYVTLLTMTIGPVVVSVLVLGSWWIRTRHCPADDPDRFSRINQRHAKFIYLISFLVYSSVSSTVFQTFPCDDIDTGESFLRVDYRIQCSTAEHRGYMVYAGFMCLVYPIGIPVAYLFFLYKARKGFKSEEEAMRTDIAVLRPLWQPYRQSVYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAANVVLALIVAVEALWMCSDVVQEIR 1022
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 307 bits (786), Expect = 5.350e-88 Identity = 176/410 (42.93%), Postives = 243/410 (59.27%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLI-DTDFYDSLLVSTIGPLAVAG-LVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEI------KSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISL 1208 C+VC G+ + +TC++C+S RR +AV + L+AV +V I +E G G R R+ R+ QTLKII+V WQI+TQF VA++TYP+ YQ FL+ IDVVN DL L+AGCL D DF+D LL+ T+GPL G LV+ R A R A Q +H SA+ ++FL+YS+ S+ +FQTFAC+ LDDG +LRVD+++ C KHK F YAG+M +VYP GIP YA+ L R+ + K+ Q +AG LWEPY+ +YYEV+EC RR++L+G+V F+ PN A QIA + L++ FF +VF ++ PY S TWL GH V LSMF LL KVDV + SQ+VF+ V + H + + ++ E I L Sbjct: 642 CSVCETGFAPS-LAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVT--IFKYLLSTEVDEGNAGCFHR-------RILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAG-------LWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICL 1034
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.650e-84 Identity = 172/399 (43.11%), Postives = 246/399 (61.65%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVV--LKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEA 1193 C +C+DGYT+ + + CSKC+ V+VVL L +V + A + YV TSGE G R+G I + R Q+LKI++VSWQI+TQFTSVA+VTYP +YQ L +DV N DL+W+LSAGC++D +F+ LLVSTI P+ VA L+L A R + E+ + +H + + ++F VYS+ S+ +F+ FACDDLD +LR D+S++C + +H+G YAG M ++Y GIP YA L +R+ +K V + +LWEPY+ +YYEV+ECFRRV+L+G+VVF+ PNTA QIA + L++ F ++ L PY R TW+ +GH V LSM+ LL KVDV + + SQEVF VL+ H M +F++ EA Sbjct: 1099 CGICSDGYTEQ-LSFACSKCSENSAGGI--AVAVVLALLIVFLAVAVVSYV------TSGEVGMGRKG--GIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPI-VALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 295 bits (756), Expect = 4.640e-84 Identity = 168/401 (41.90%), Postives = 238/401 (59.35%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLID-TDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202 CAVC DGY+ + +TC++C+ RR + L+AV VA + +E E+ R + + ++ Q+ KII+V WQI+TQF + A+VTYPR+YQ FL+ IDV+N+DL M+SAGCL DF+D LLVSTI PL G++ + LRR + +H + + +++FLVYS+ S+++FQTFACD LDDG ++LR D+ + C T KH YAGVM +VYP GIP YA+ L R+ + + AG+ + LWE Y+ +YYEV+EC RR++L+G+VVF+ PN A QIA + L+++FFF VF IL PY WL G V LSMF LL KVDV + S SQ+ ++ VL+ H MF+ + AE I Sbjct: 624 CAVCGDGYSPS-LAHTCTRCSRSRRQGLMVATVFAALIAVCATVATFRYLLSTEFEE---------RNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAGAQPIAS-LWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGI 1013
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 298 bits (763), Expect = 1.920e-83 Identity = 177/404 (43.81%), Postives = 244/404 (60.40%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCL-IDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQAS-DQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLK--DLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202 CAVC Y+ + +TC C+S RR + V++ + ++ VL AA Y+ S +E G G RR R+ + ++LKII+V WQI+TQF A+VT+P LYQ FL+ IDV+N D+ +L+AGCL D DF+D LLV+TIGPL VAG + ++ +RR AS D +H +A+ +++F+VYS+ S+ +FQTFAC+ LDD +LR D+ + C KHK F YA +M +VYP GIP YAL L R+ + A A TV L LWEPY+ +YYEVVEC RRV+L+G+VVF+ PN A QIA + L++ FF ++F IL PY S WL GH V LSMF LL KVDV G+ + SQ +FS V + H M + ++ E I Sbjct: 1227 CAVCETDYSSS-LAHTCKHCSSSRRRG-LTVIAAIAVIVTVLAFAAVFQYMLS-TEHEEGIFGCFRR-------RVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLAD---AGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGI 1617
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 294 bits (753), Expect = 1.090e-82 Identity = 169/418 (40.43%), Postives = 254/418 (60.77%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLS----RAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKS--GQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISL-LAVQELRAP 1235 CAVC+DGYT + + C++C+ G +A V V++L V VA+ M SG G R G+ +RL + Q++KI++V+WQI+TQFTSVA+VTYP +Y+ FL +DV N DL+W+LSAGC+ D DF+D LL ST+ P V GL+ L+ A ++ R +A + +H S + ++FL+YS+ SA +F+ F C++L+DGT++LR D+++ C + KHK F YAG M +VY GIP YA L R+ +K + T DLW+PY+ +YYEV+EC RRV+L+G+VVF+ PNTA QIA + +++ F +V L P+ + WL GH V +SM+ LL KVDV G+ + SQ V+ +VL+ AH M + ++ E F ++ L V++ + P Sbjct: 845 CAVCSDGYTTE-LAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAM---------SGRVGDVRSGVV---ARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSP--VIGLLFLAGTYAAAVSMNRGKAESLQ---VIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEP 1244
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 291 bits (745), Expect = 1.580e-82 Identity = 172/429 (40.09%), Postives = 251/429 (58.51%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNER---RHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVV--LKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI---SLLAVQELRAPRQSGGRVGSR 1265 CA+C+D Y+ + +TCSKC + +A V+ L V+ V + YV + +G + LKR QTLKI++V+WQI+TQFTS A+VTYP +YQ FL +DV N D++W+LSAGC++D DF+D LL+STIGP+ + LL AAT R ++ +T + RH S + + FLVYS S+++FQTFACD L+ G +LR D+ ++C + KH+GF YAG M ++YP GIP Y L R+ ++ V + +LW+PY+ YYYEV+EC RR++L+GLVVF+ PNTA QIA + ++++ F V+ L PY TW+ + HA V +S++ LL KVDV + SQ+VF VL+ AH M + ++ E + S + Q+ APR G V R Sbjct: 606 CAICSDDYS-AQLGFTCSKCPNRAGGILLATALAVIGLFTVVAV---VSYVAWRVDPNTG---------CAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPI----MALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMR 1017
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 293 bits (750), Expect = 1.100e-81 Identity = 166/403 (41.19%), Postives = 241/403 (59.80%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATI---AVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202 CAVC+ GY+ G R TC C + + + A + + L AVV +V+ + V+ Q G G RR + ++R++++ +KI++V WQI+TQ++ VA V YP YQ FL+ +DVVNLDL ++LS C+ DT+FYD LL++TIGP+ V GL+ + RR + ++ R +RRH S ++ F++Y+ S IF+TF CD LDDG S+LR D+S+ C TP H + YAG+ +VYP GIP + L R+E+K + DLWEPY+ AYYYEVVECFRR+ L+G VF+ P+++ Q+A LL+ F VV IL P+ WL GH V SM+ LL +VDV + SQEVFS V+++AH AMF+ ++A+ I Sbjct: 635 CAVCSAGYSPGYSR-TCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGW-RRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDV-QRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLI 1034
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE) HSP 1 Score: 283 bits (725), Expect = 1.750e-81 Identity = 169/404 (41.83%), Postives = 237/404 (58.66%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCL-IDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNER-RHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLK--DLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202 CAVC Y+ + + C+ C+S RR + + ++ +++ V+ VA + +E E+ L R R+ + Q+LKII+V WQI+TQF A+VTYP LYQ FL+ IDV+N D+ +L+ GCL + DF+D LLV+TIGPL VAG + ++ LRR AS R +H +A+ +++FLVYS+ S+ +FQTFAC+ LDD +LR D+ + C KHK F YA +M +VYP GIP YA L + + A A TV L LWEPY+ +YYE VEC RRV L+G+VVF+ PN A QIA + L++ +F ++F IL PY S WL GH V LS+F +L KVDV G+ SQ VFS VL+ H M + ++ E I Sbjct: 316 CAVCKTDYSPS-LAHICTHCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLSTEHEEGI---------LWCFRRRVLGAVPVQSLKIIVVVWQILTQFADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILAD---AGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGI 706
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 291 bits (744), Expect = 6.700e-81 Identity = 165/408 (40.44%), Postives = 242/408 (59.31%), Query Frame = 3 Query: 3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVV--LLLAVVLVVAARIMYV------QSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202 CAVCA GY+ G R TC C + + + + + L LA V+V+ +R++ V Q G G RR + +++R++++ +KI++V WQI+TQ++ VA + YP YQ FL+ +DVVNLDL ++LS C+ DT+FYD LL++TIGP+ V GL+ + RR + ++ R +RRH S ++ F++Y+ S IF+TF CD LDDG S+LR D+S+ C TP H + YAG+ +VYP GIP + L R+E+K + DLWEPY+ AYYYEVVECFRR+ L+G VF+ P+++ Q+A LL+ F VV IL P+ WL GH V SM+ LL +VDV + SQEVFS V+++AH AMF+ ++ + I Sbjct: 611 CAVCAAGYSPGYSR-TCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGW-RRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDV-QRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLI 1015 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10171.199.1 >prot_H-canaliculatus_F_contig10171.199.1 ID=prot_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=375bp MYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFback to top mRNA from alignment at H-canaliculatus_F_contig10171:2415..4739- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10171.199.1 ID=mRNA_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10171:2415..4739- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10171:2415..4739- >mRNA_H-canaliculatus_F_contig10171.199.1 ID=mRNA_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2250bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10171:2415..4739- (Hapterophycus canaliculatus Oshoro5f female)back to top |