mRNA_H-canaliculatus_F_contig10163.189.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10163.189.1
Unique NamemRNA_H-canaliculatus_F_contig10163.189.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A6H5J9Q8_9PHAE (FAD_binding_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9Q8_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 7.100e-159
Identity = 236/268 (88.06%), Postives = 255/268 (95.15%), Query Frame = 1
Query:    1 QLPVVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPEEVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            QLPVVVVGGGLAGLAASIEASRAGAPV+LMEKG+RIGGNSAKATSGINGALT AQ   D +DTL++F ADIIKSGGGRSTPELVDVLV KS EAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPG DGRPVPVGWTTVQKVYK+VE+HPEE+SVMTNA VTSL T+DAGRVTGVRY++GG+G+++ LPAASVVL+TGGYAYDRS+GSLLSEFAPERLHLATTSG QATGDGVRLGQAAGASLVDMDQVQ+HPTSLVDP+DPTNLSKFL
Sbjct:   31 QLPVVVVGGGLAGLAASIEASRAGAPVVLMEKGSRIGGNSAKATSGINGALTTAQTLKDHSDTLQSFKADIIKSGGGRSTPELVDVLVEKSAEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGSDGRPVPVGWTTVQKVYKFVEDHPEEISVMTNAHVTSLTTNDAGRVTGVRYQQGGDGDEIGLPAASVVLTTGGYAYDRSEGSLLSEFAPERLHLATTSGPQATGDGVRLGQAAGASLVDMDQVQVHPTSLVDPKDPTNLSKFL 298          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A835YME9_9STRA (NADH-dependent fumarate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME9_9STRA)

HSP 1 Score: 325 bits (834), Expect = 2.680e-105
Identity = 169/274 (61.68%), Postives = 211/274 (77.01%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWL--ESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPEEVSVMTNADVTSLMTDDAGRVTGVRYR-------KGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            V VVGGGLAGLAA+IEA  AGA V L +K   +GGNSAKATSGINGA T+ Q++    D +E F  D+I+SG GRS P LVDV+  +S +AVEWL  + FGL L+ ++ CGGH APRTHR+PP PDGRPVPVG+TT++ V  Y+   PE V+++TNA+VT L+    G VTG+ YR       KGG+GE VE+ A +VVL+TGGYA+DRS  SLLS++AP++LHLATTSG QATGDGVRL +  GA+LVDMDQ+Q+HPT+LVDP+DPTNLSKFL
Sbjct:   55 VAVVGGGLAGLAAAIEAYEAGATVYLFDKAKSLGGNSAKATSGINGAETSVQRDKGIQDKVEMFHGDVIRSGAGRSVPALVDVVAGRSADAVEWLMGDRFGLGLTAIAHCGGHSAPRTHRLPPLPDGRPVPVGFTTIKAVQGYLSSRPERVNIVTNAEVTRLLVAKDGAVTGLSYRRAAQGGGKGGQGETVEVAAGAVVLATGGYAFDRSPASLLSKYAPDKLHLATTSGPQATGDGVRLAEDLGAALVDMDQIQVHPTALVDPKDPTNLSKFL 328          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A0G4G8H0_9ALVE (FAD_binding_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G8H0_9ALVE)

HSP 1 Score: 266 bits (681), Expect = 2.900e-82
Identity = 149/266 (56.02%), Postives = 188/266 (70.68%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESF-GLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPEEVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            V+VVG GLAGL A+IEA +AGA VIL+EK    GGNSAKATSG+N   T AQ      D+L  F  D+I SGGG S P+LVDVLV  S  A  +LE+F GL+LS++SQCGGH  PRTHR+PP PDG+P PVGWTTV  + K+V   P  V++ TN+ VT L+ D AG+V GV    G      E+ A +VVL+TGGY++DRS  S LS++AP  ++L TT+G+ A GDGVRLG   GA +VDMD+VQ+HPT+ VDP+DP +  KFL
Sbjct:   49 VIVVGSGLAGLTATIEAEKAGANVILLEKTANTGGNSAKATSGMNATPTRAQLMQHIEDSLHEFEEDVIASGGGFSDPQLVDVLVKSSAYAYNFLETFEGLNLSVVSQCGGHSKPRTHRLPPSPDGKPSPVGWTTVSTLKKFVTSLPA-VTLRTNSRVTHLLKDSAGKVGGVGLESG-----EEVRAGAVVLATGGYSHDRSADSFLSKYAPSVVNLPTTNGNFAEGDGVRLGLGVGAGVVDMDKVQVHPTAFVDPKDPLSSVKFL 308          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A836CD50_9STRA (FAD binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD50_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.420e-80
Identity = 135/240 (56.25%), Postives = 172/240 (71.67%), Query Frame = 1
Query:  127 ATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWL--ESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPEEVSVMTNADVTSLMTDDAGRVTGVRY------------RKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            ATSGINGA TA Q++    DT+E F  D +KSGGGRS P LV  L   S +A+ WL  E FGL L+ +++CGGH APRTHR+PP PDGRPVPVG+ T++ V  ++   PE V ++TNA VT L+ D  G V G+RY             +GGEGE  E+ AA+VVL+TGG+AYDRS+GSLL ++ P++ HLATTSG  ATGDG++L +A GA LVDMDQ+Q+HPT LVDP+DP NL+KFL
Sbjct:   12 ATSGINGAETAVQRDKGIHDTVELFRDDTLKSGGGRSVPALVTELTGSSAQAIAWLMGERFGLGLTAIARCGGHSAPRTHRLPPLPDGRPVPVGFATIRAVQGHLASRPERVQIVTNARVTQLLLDSQGAVRGLRYIQQTSTEATGGAPQGGEGE-TEVAAAAVVLATGGFAYDRSEGSLLRKYTPDKAHLATTSGPYATGDGIKLAEAVGAVLVDMDQIQVHPTGLVDPKDPANLTKFL 250          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A8J1UY63_OWEFU (Ofus.G22230 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UY63_OWEFU)

HSP 1 Score: 250 bits (638), Expect = 2.410e-76
Identity = 138/266 (51.88%), Postives = 190/266 (71.43%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVE-EHPEEVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            V+VVGGGLAGL+ASIEASR GA V ++EK   +GGNSAKATSGING  T AQ     TD+++AF +D + SG G S  ELV VL  +S +A+ +L+SFG++L+ + Q GGH A RTHRIPP P+G+P PVGWT V  + K VE E  ++V+V+T + + +++ +D G V GV Y    +GEQ EL A +V+L+ GGYA D ++ SLL+E+ P+   L TT+G  ATGD V++G+ AG SL+ MD+VQ+HPT  ++P  PT+ +KFL
Sbjct:   59 VIVVGGGLAGLSASIEASRLGAKVTIIEKEKNLGGNSAKATSGINGVGTDAQSANKVTDSIDAFVSDTLSSGDGLSKEELVQVLGKQSGDAITFLKSFGVNLTSVVQLGGHSAARTHRIPPTPEGKPSPVGWTIVSTLRKVVENELADKVNVLTKSTLKTVLIED-GTVKGVAYTTE-DGEQKELAADAVILTAGGYANDHTETSLLAEYTPQLAKLPTTNGPWATGDVVKIGRDAGMSLIHMDKVQVHPTGFIEPTQPTHSTKFL 322          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A836CHE4_9STRA (Putative NADH-dependent fumarate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE4_9STRA)

HSP 1 Score: 248 bits (634), Expect = 6.080e-73
Identity = 151/290 (52.07%), Postives = 187/290 (64.48%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWL-ESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPE--------------------EVSVMTNADVTSLMT-DDAG--RVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQA-AGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            +VVVGGGLAGL A+IEA+R G+ V LMEK   +GGNSAKATSGING  T A       DTL  F AD ++SGGG S   LVD LV  ST+ V WL E FGLDLS L+Q GGH APRTHR+PP  +GRPVPVGWTTV  +   V++                        V+V+TN+ +  L+T DD G   V G+ Y K  +G + E+   +V+L+TGG+A+DRS+GSLL EFAP++L L TTSG QA G  +R+ +    A LV MD VQ+HPT LVDP+DP  LSK L
Sbjct:   32 IVVVGGGLAGLCATIEAARKGSTVTLMEKNKGVGGNSAKATSGINGLNTFAHAAKGIKDTLARFKADTLRSGGGLSDETLVDALVSYSTDTVNWLHEDFGLDLSDLTQLGGHSAPRTHRLPPQ-NGRPVPVGWTTVSALKAVVDKXXXXXXXXXXXXXXXXXXXXXLPNVTVLTNSTLVRLLTEDDDGDISVVGLEYEK--DGAKTEMRCDAVILATGGFAFDRSEGSLLREFAPQKLDLPTTSGPQADGSAIRIARRDVNALLVHMDHVQVHPTGLVDPKDPLALSKML 318          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A4P9YIF9_ROZAC (FAD/NAD(P)-binding domain-containing protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YIF9_ROZAC)

HSP 1 Score: 229 bits (584), Expect = 6.150e-71
Identity = 136/267 (50.94%), Postives = 173/267 (64.79%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEH-PEEVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRS-KGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            VVV+G GLAGL ++IEA+R GA V L+EK   IGGNSAKATSGING+ T  Q +    D++E F  D +KSGG      LV VL  +S  A+EWL SFGL+LS+LSQCGGH   RTHR P   +GRP PVGW  +  + K+VE    ++V+V  N  +T ++ ++      V     G  E+ E  A S VL+TGG++ D+S   SLL EFAP  L LATT+G  ATGDGV++ +  G SLVDMD+VQ+HPT  V  EDP N  KFL
Sbjct:    9 VVVIGSGLAGLTSTIEAARNGAKVTLIEKEASIGGNSAKATSGINGSETKYQMDAGIKDSIEEFENDTLKSGGDFCDKSLVKVLASQSKSAIEWLSSFGLNLSVLSQCGGHSVKRTHREP-DVNGRPAPVGWDIISALRKHVENDLKDQVTVKVNTKLTDMVVENDRLAKIVTVDSQGTAEEFE--ADSFVLTTGGFSADKSYNDSLLKEFAPNLLSLATTNGKWATGDGVKIARKIGVSLVDMDKVQVHPTGFVSLEDPENHQKFL 272          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A7S1G7Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7Q1_9STRA)

HSP 1 Score: 226 bits (577), Expect = 3.150e-70
Identity = 137/273 (50.18%), Postives = 184/273 (67.40%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGING----ALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHP-EEVSVMTNADVTSLMTDDAG---RVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            VVVVGGGLAGL+A++EA   GA V L+EK  R+GGNSAKATSGIN     A  AA K    TD++E F  D + S  G +  ELV +L  +S  AV ++E  G+ LS+LSQ GGH+APRTHR PP  DGRP P+G+  V  + + +   P   ++V+T+ +VTSL T + G   RV GV  R   +   + L A +V+L+TGG+  DRS GSLL ++AP+ + L TT+G+ ATGDG+R+ Q AGA+LV M +VQ+HPT+ VDP+DP  L+KFL
Sbjct:    7 VVVVGGGLAGLSAALEALAGGAHVTLVEKEARLGGNSAKATSGINAVGDDAQVAAVKARGLTDSVEMFAEDTMSSARGEADAELVRLLAAESAAAVAFVERHGVSLSVLSQLGGHRAPRTHREPPKEDGRPRPIGFDIVTALKEALLATPTSHLNVLTSTEVTSLTTLNRGGRLRVVGVDARAA-DNTLMGLDADAVILATGGFCADRSPGSLLKQYAPDLVSLPTTNGAWATGDGMRMAQDAGAALVSMHRVQVHPTAFVDPKDPDALTKFL 278          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A1X0NGM9_9TRYP (NADH-dependent fumarate reductase (Fragment) n=2 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NGM9_9TRYP)

HSP 1 Score: 228 bits (582), Expect = 4.050e-70
Identity = 130/274 (47.45%), Postives = 182/274 (66.42%), Query Frame = 1
Query:   10 VVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSG-GGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEH-PEEVSVMTNADVTSLMTDDAGRVTGV-RYRKGG------EGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            V+VVGGGLAG +A+IEA+  GA VIL+EK +++GGNSAKATSGIN   T AQ +    D  + F  D  KSG GG + P LV VL  KS +A+ WL   G+ L++LSQ GGH   RTHR P   DG PVP+G+T +Q + +++  +  + +++M N  VT+L+ +   R  GV + R  G      +GE+ +L A +V+L+TGG++ D++  SLL ++AP+     TT+G  ATGDGV+L  A G  LVDMD+VQ+HPT L+DP+DP N +KFL
Sbjct:   26 VIVVGGGLAGQSAAIEAANCGAQVILIEKESKLGGNSAKATSGINAWGTRAQAKASIMDGGKYFERDTFKSGIGGNTDPSLVKVLSVKSADAIRWLTCLGVPLTVLSQLGGHSRKRTHRAPDKSDGTPVPIGFTIMQTLERHIRNNLSDHITIMENTSVTALLHESKTRPDGVVQVRVKGVEITQNDGEKTQLLADAVILATGGFSNDKTANSLLQKYAPQLSKYPTTNGPWATGDGVKLASALGVKLVDMDKVQLHPTGLIDPKDPANPTKFL 299          
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Match: A0A0N5AZ59_9BILA (FAD_binding_2 domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AZ59_9BILA)

HSP 1 Score: 232 bits (591), Expect = 8.640e-70
Identity = 130/270 (48.15%), Postives = 180/270 (66.67%), Query Frame = 1
Query:    7 PVVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGALTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLESFGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEE----HPEEVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYAYDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQIHPTSLVDPEDPTNLSKFL 804
            PV+VVGGGLAGL+ SIEA   GA VIL+E    +GGNSAKA+SG+    T AQ+  + +D+ + F +D + SGG  + P LVDVLVH S ++V+WL + G+DLS ++ CGGH   R H IP    GRP+PVG   ++ + K V E    HP+++ + T  +V  L+T +   VTGVR R     E  E+   +VVL+TGG++ DR   SLL+EFAPE+L   TT+G  A G GV++ +A GA+LV M++VQ+HPT+ VDP+DPT  +KFL
Sbjct:   37 PVIVVGGGLAGLSTSIEAYNNGASVILVEGEKSLGGNSAKASSGMAACNTEAQRTHNISDSTDLFYSDTMASGGRENDPTLVDVLVHDSAKSVQWLINLGVDLSDVNLCGGHSVKRVHWIPSPKKGRPIPVGLNIIRTLSKRVNEIAAKHPDKLKIYTGTEVIGLVTWN-DFVTGVRVRNSSTNEINEINGKAVVLTTGGFSCDRGSDSLLAEFAPEKLSFPTTNGPWARGRGVKMARAMGAALVGMNRVQVHPTAFVDPQDPTASTKFL 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10163.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9Q8_9PHAE7.100e-15988.06FAD_binding_2 domain-containing protein n=2 Tax=Ec... [more]
A0A835YME9_9STRA2.680e-10561.68NADH-dependent fumarate reductase n=1 Tax=Tribonem... [more]
A0A0G4G8H0_9ALVE2.900e-8256.02FAD_binding_2 domain-containing protein n=1 Tax=Ch... [more]
A0A836CD50_9STRA4.420e-8056.25FAD binding domain-containing protein n=1 Tax=Trib... [more]
A0A8J1UY63_OWEFU2.410e-7651.88Ofus.G22230 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A836CHE4_9STRA6.080e-7352.07Putative NADH-dependent fumarate reductase n=1 Tax... [more]
A0A4P9YIF9_ROZAC6.150e-7150.94FAD/NAD(P)-binding domain-containing protein (Frag... [more]
A0A7S1G7Q1_9STRA3.150e-7050.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1X0NGM9_9TRYP4.050e-7047.45NADH-dependent fumarate reductase (Fragment) n=2 T... [more]
A0A0N5AZ59_9BILA8.640e-7048.15FAD_binding_2 domain-containing protein n=1 Tax=Sy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10163contigH-canaliculatus_F_contig10163:1523..5122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.3
Seed ortholog evalue1.9e-128
Seed eggNOG ortholog2880.D7FSV9
KEGG koko:K14402,ko:K15146
KEGG Pathwayko03015,ko04919,map03015,map04919
EggNOG free text desc.fumarate reductase (NADH) activity
EggNOG OGsCOG1053@1,KOG2404@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021
Hectar predicted targeting categorysignal peptide
Exons7
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928645.8687003-CDS-H-canaliculatus_F_contig10163:1522..16581622928645.8687003-CDS-H-canaliculatus_F_contig10163:1522..1658Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 1523..1658 +
1696845511.2457309-CDS-H-canaliculatus_F_contig10163:1522..16581696845511.2457309-CDS-H-canaliculatus_F_contig10163:1522..1658Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 1523..1658 +
1622928645.8786824-CDS-H-canaliculatus_F_contig10163:1977..21201622928645.8786824-CDS-H-canaliculatus_F_contig10163:1977..2120Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 1978..2120 +
1696845511.2585423-CDS-H-canaliculatus_F_contig10163:1977..21201696845511.2585423-CDS-H-canaliculatus_F_contig10163:1977..2120Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 1978..2120 +
1622928645.888066-CDS-H-canaliculatus_F_contig10163:2654..27201622928645.888066-CDS-H-canaliculatus_F_contig10163:2654..2720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 2655..2720 +
1696845511.2757335-CDS-H-canaliculatus_F_contig10163:2654..27201696845511.2757335-CDS-H-canaliculatus_F_contig10163:2654..2720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 2655..2720 +
1622928645.897176-CDS-H-canaliculatus_F_contig10163:3446..35541622928645.897176-CDS-H-canaliculatus_F_contig10163:3446..3554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 3447..3554 +
1696845511.2876182-CDS-H-canaliculatus_F_contig10163:3446..35541696845511.2876182-CDS-H-canaliculatus_F_contig10163:3446..3554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 3447..3554 +
1622928645.9065924-CDS-H-canaliculatus_F_contig10163:3948..40871622928645.9065924-CDS-H-canaliculatus_F_contig10163:3948..4087Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 3949..4087 +
1696845511.3091285-CDS-H-canaliculatus_F_contig10163:3948..40871696845511.3091285-CDS-H-canaliculatus_F_contig10163:3948..4087Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 3949..4087 +
1622928645.9160352-CDS-H-canaliculatus_F_contig10163:4520..46751622928645.9160352-CDS-H-canaliculatus_F_contig10163:4520..4675Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 4521..4675 +
1696845511.3243012-CDS-H-canaliculatus_F_contig10163:4520..46751696845511.3243012-CDS-H-canaliculatus_F_contig10163:4520..4675Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 4521..4675 +
1622928645.9254055-CDS-H-canaliculatus_F_contig10163:5065..51221622928645.9254055-CDS-H-canaliculatus_F_contig10163:5065..5122Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 5066..5122 +
1696845511.3350031-CDS-H-canaliculatus_F_contig10163:5065..51221696845511.3350031-CDS-H-canaliculatus_F_contig10163:5065..5122Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10163 5066..5122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10163.189.1prot_H-canaliculatus_F_contig10163.189.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10163 1523..5122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10163.189.1

>prot_H-canaliculatus_F_contig10163.189.1 ID=prot_H-canaliculatus_F_contig10163.189.1|Name=mRNA_H-canaliculatus_F_contig10163.189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=268bp
QLPVVVVGGGLAGLAASIEASRAGAPVILMEKGNRIGGNSAKATSGINGA
LTAAQKETDATDTLEAFTADIIKSGGGRSTPELVDVLVHKSTEAVEWLES
FGLDLSLLSQCGGHQAPRTHRIPPGPDGRPVPVGWTTVQKVYKYVEEHPE
EVSVMTNADVTSLMTDDAGRVTGVRYRKGGEGEQVELPAASVVLSTGGYA
YDRSKGSLLSEFAPERLHLATTSGSQATGDGVRLGQAAGASLVDMDQVQI
HPTSLVDPEDPTNLSKFL
back to top

mRNA from alignment at H-canaliculatus_F_contig10163:1523..5122+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10163.189.1 ID=mRNA_H-canaliculatus_F_contig10163.189.1|Name=mRNA_H-canaliculatus_F_contig10163.189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3600bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10163:1523..5122+ (Hapterophycus canaliculatus Oshoro5f female)
CAGCTCCCCGTCGTAGTGGTGGGTGGAGGCTTAGCGGGCCTGGCGGCTTC GATCGAGGCGTCCAGGGCAGGAGCCCCGGTGATCTTGATGGAAAAGGGCA ACCGCATCGGGGGCAACTCCGCCAAGGCTACCTCAGGTGCGCATGCCCTC GTATCGGTATCCGACGCTTGAGCTTCCCCCACAAGCGCCGTGTTATCCTC TGAGGACGTCAGCTGTAGACACTGCGCGACGAAAGTGAAACAAGCTACTT TAGTTTTAACAACCGGGCGGGCGTCGATTCTTCATTGACCTGTCGGTCAC GCTCTCTTGGAACATCCGCCACGCGTTGTATCTTGTTTTGCTCCCGCTGT TCCTCGCGAATTCACTCGTCGCGATGATGGATCCGCGTCGTTCGTCGAGG TCAACAATGCTCTTCGATGTTGGACTGATGTATCGGTCTTGCCGTATCGG GCCAGGCATCAACGGAGCGCTGACCGCTGCGCAAAAGGAGACGGACGCCA CGGACACGCTGGAGGCGTTCACCGCAGACATCATCAAGTCTGGCGGGGGT CGAAGCACGCCCGAGCTAGTGGACGTCTTGGTGCACAAGAGCACGGAGGT GGGTTGGGTTGGGTTGGGTTGGGTTGGGTTGGGTTGGGTTGGGTTCGGCT TGCTACGTTAACCGCCGTTCACTCCCTTGGTGTCGTGTCGTGTCGTGTCC TGCCGAAACATGTTCGAACTGTTCGCACGGTGGATGGGGGTAGGCGTGGA GTTTTTCCGGGCTGGGCTGGGCTGGATCGGGACAAGATGGGGTAGGTTGG CCGAGGACTACGTCTGCTGGGCATACGTCGAGCTTCCTGGTATCCGCAGA GGGCGCCTCCTCTGCTTGTTCTACCTGTTTCGATTGAACATCAACGTTGT TAAGCGGAGGGATCTGGAATCGCATGCCTCTCCTCGTCGGTCTCGAGATG AGAATGATATAACACTTCATTAGCTCTGCGCCGATAAACTCGGCATTCCC CATGCGCTAATTGTTTCGTGCCTCGAGTGCGGCCCTGGCACCTAGCTACA AGCAGCAAAGCACAGCACTCGTTAGCACTCCCGAACACTCCTGAACACGT TTCCCCGGGTGCTTAATCGATTCGTCTGGCAGGCTGTGGAGTGGTTGGAG TCGTTCGGGTTGGACCTGTCCCTCCTCTCGCAGTGTGGCGGCCACCAGGT GCGTTACTCGTCGCGAACGCAACGAGCAGAACTTCTTGCACTTTCAGCGT CTTGGACTGGCGTAGTTCTGGAGCACTTGATTCGCTCCGGAACTGCGGTG CTCCTATCATGCTCTGTCGGTTGTTTTTCGCCGTGAACGTGCCTGCTGGT GATTTCCACTCCATGCCGCGCCGGAAGCGCGTGCTTCAAGGTGTACCATG GTATGCTTGAAGTGGTCATCGCGAGCTCGGTCGGCGTAAGAGGGCGCGGA CGGCAGCCTCGTGCGTGAAGTTTCGGTGTTTGTTTGTTGCTCGTGCCCCA CGTTGGTGTCGTCAGCGCCGCAGCCGTACCCTCGTTTCCGTCCGCGTCAT CGCGGAAAATCTTGATGCAAGATTAATTCGAATCGTTGTGACGGGATCAC CGTTGCCATCAAGGACACCCGGTTCCGAAGCTACCCGTCCCACCGACCCC TTCCGGATTCGAGACACACAATCACGCGTTGGGGTCTTCGGGGCATCACT TGAAGGCTGCTCGAACGCGCCGCATCCCGCCTGACTCATCCCGAACCTTG ATGTGCACCGCGAGTTCACGGCATCCCTCCAGCCCTTACCACTACGCACG GCCAACCGTTACGCTGATCCGGGGCCCAGAAGGCTTCCCCCATCCTGTCT CAAGCCCTTGCCCTGAATCCATCCCTGACCTCAAGTCCCCACCTTCACTT TGTCCATCAAAACAACCCTTGTAGGCGCCCCGAACGCATCGCATCCCCCC TGGACCGGACGGGCGCCCCGTGCCTGTTGGGTGGACCACGGTGCAGAAGG TGTACAAGTACGTCGAGGAGCACCCTGAAGAGGTAAGAGGAGTAAGAAGC TAGCACGTGTGCCGCTAGAGTATCAAGAATTGCCAGGCAGGGGTGACACG CAGTGGTGGTAAGCGCTGGCTGGAATATGGCGGTACCCTCACGAAGTTCG AAGTGCAGCTGTTGTTCCTGGCAGAACATCACACGAGCGTGCCCTTTGGC CACATCCCTGCGTCACCGCACAACGATATTCTTCGTCGTCGTCGTTACCC TCTTGATGACAAGCGATGCAACAGGATGCGTGGCGCTCTGCACCCCCGCA GTGTGAGGTCGTCCAAGCTTGCCTCTCTTGTTCGTTGTTGCTGCTTCTGC TTCTGCTGCTGCTGCTCTACCGGTAACTTGCGCCGTTTCCTATGGTATCC CTATACGGCGAAACACGGCACCGAAGGTATCGGTCATGACAAACGCGGAC GTGACGTCCTTGATGACTGATGACGCCGGCCGTGTCACCGGAGTCCGGTA CCGGAAAGGGGGAGAGGGGGAGCAGGTGGAACTGCCAGCGGCGTCCGTGG TGCTCTCCACTGGAGGTGTGTTCCTGCTACGAGCATTTTCGGCTCCTCGG ATGACCGTTGTGCGGAGCGTGCTTTCGTGCGGCAATCCCAAAAAAAATTC CTATGTTGGGATGTGGAAACAAGAGAGCTTTGTTGCTACGGACGAGCTGT GTGGGTATTCCGCCGGCCTCTTTGTCTTGTTTGAGGGCGCCTCTTCTTTT GTTTTCTCCTCTGGAGGGCGTGGTCTGCCCACGGTTACAAAGTGCTCTGG GGACATTCCTCTCAAAACTGCCCCGTGTGTAGACGCCAGGACAGCCGCAA TAAGCGGCTCCAGATGGCCAAGAAACCTGCCCGGCTCTGAATCCTCCCTA ACCCCAGTCCTTGGGTATTGCCAGCGTGCTACCGCTGACCCCCCCCCCAA CCCTTACCGCCGCTGAAATCGATCGACATCTTCAAACCCGTCGTTCAGGA TACGCATATGACAGATCGAAAGGATCGCTGCTGTCCGAGTTCGCCCCGGA GCGTCTCCACCTGGCGACCACGAGCGGTTCGCAGGCTACTGGAGACGGTG TCCGACTTGGCCAGGCCGCCGGGGCGAGCCTTGTGGACATGGATCAAGTG CAGGTGCGCCGTCGTCTTGGCCCTCGGTTGTTCTATTCTAGCGACGCGGC AGTCTTGCCTCTCCTGTGTCCTTGTTCTTTGATGGATGCTCAAGCGATGG CATCCTGAGTGTGCGACCGCAGGCGGTGGGTGCCGAGTAAGAGTGCTCAA CTGCGTCCTGCTCTGGCTACCTGGCCGACTCTGCCGCCGCCGGCATCGGA ATTCCCCCTCGATTGTGTGTGCTGCTGTTCGCGCGTATCGCTGGAGACAT GAGTGGAGTAGCTGTTGATCAAAGGCTCGCCGAGCCGCGTACGCCACCAG CGAGGGAGATCTGAGATGTGGACCCGTGACCCCCTCCCCCCCCGCTCTCT GTCTGCGCACCCCCCTTCCAACACACACGCCCAATCGATACAGATACACC CCACGTCTCTAGTGGACCCGGAGGATCCGACGAACCTTTCCAAGTTTCTC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10163:1523..5122+

>mRNA_H-canaliculatus_F_contig10163.189.1 ID=mRNA_H-canaliculatus_F_contig10163.189.1|Name=mRNA_H-canaliculatus_F_contig10163.189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1608bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10163:1523..5122+ (Hapterophycus canaliculatus Oshoro5f female)
CAGCTCCCCGTCGTAGTGGTGGGTGGAGGCTTAGCGGGCCTGGCGGCTTC
GATCGAGGCGTCCAGGGCAGGAGCCCCGGTGATCTTGATGGAAAAGGGCA
ACCGCATCGGGGGCAACTCCGCCAAGGCTACCTCAGCAGCTCCCCGTCGT
AGTGGTGGGTGGAGGCTTAGCGGGCCTGGCGGCTTCGATCGAGGCGTCCA
GGGCAGGAGCCCCGGTGATCTTGATGGAAAAGGGCAACCGCATCGGGGGC
AACTCCGCCAAGGCTACCTCAGGCATCAACGGAGCGCTGACCGCTGCGCA
AAAGGAGACGGACGCCACGGACACGCTGGAGGCGTTCACCGCAGACATCA
TCAAGTCTGGCGGGGGTCGAAGCACGCCCGAGCTAGTGGACGTCTTGGTG
CACAAGAGCACGGAGGCATCAACGGAGCGCTGACCGCTGCGCAAAAGGAG
ACGGACGCCACGGACACGCTGGAGGCGTTCACCGCAGACATCATCAAGTC
TGGCGGGGGTCGAAGCACGCCCGAGCTAGTGGACGTCTTGGTGCACAAGA
GCACGGAGGCTGTGGAGTGGTTGGAGTCGTTCGGGTTGGACCTGTCCCTC
CTCTCGCAGTGTGGCGGCCACCAGGCTGTGGAGTGGTTGGAGTCGTTCGG
GTTGGACCTGTCCCTCCTCTCGCAGTGTGGCGGCCACCAGGCGCCCCGAA
CGCATCGCATCCCCCCTGGACCGGACGGGCGCCCCGTGCCTGTTGGGTGG
ACCACGGTGCAGAAGGTGTACAAGTACGTCGAGGAGCACCCTGAAGAGGC
GCCCCGAACGCATCGCATCCCCCCTGGACCGGACGGGCGCCCCGTGCCTG
TTGGGTGGACCACGGTGCAGAAGGTGTACAAGTACGTCGAGGAGCACCCT
GAAGAGGTATCGGTCATGACAAACGCGGACGTGACGTCCTTGATGACTGA
TGACGCCGGCCGTGTCACCGGAGTCCGGTACCGGAAAGGGGGAGAGGGGG
AGCAGGTGGAACTGCCAGCGGCGTCCGTGGTGCTCTCCACTGGAGGTATC
GGTCATGACAAACGCGGACGTGACGTCCTTGATGACTGATGACGCCGGCC
GTGTCACCGGAGTCCGGTACCGGAAAGGGGGAGAGGGGGAGCAGGTGGAA
CTGCCAGCGGCGTCCGTGGTGCTCTCCACTGGAGGATACGCATATGACAG
ATCGAAAGGATCGCTGCTGTCCGAGTTCGCCCCGGAGCGTCTCCACCTGG
CGACCACGAGCGGTTCGCAGGCTACTGGAGACGGTGTCCGACTTGGCCAG
GCCGCCGGGGCGAGCCTTGTGGACATGGATCAAGTGCAGGATACGCATAT
GACAGATCGAAAGGATCGCTGCTGTCCGAGTTCGCCCCGGAGCGTCTCCA
CCTGGCGACCACGAGCGGTTCGCAGGCTACTGGAGACGGTGTCCGACTTG
GCCAGGCCGCCGGGGCGAGCCTTGTGGACATGGATCAAGTGCAGATACAC
CCCACGTCTCTAGTGGACCCGGAGGATCCGACGAACCTTTCCAAGTTTCT
CATACACCCCACGTCTCTAGTGGACCCGGAGGATCCGACGAACCTTTCCA
AGTTTCTC
back to top