mRNA_H-canaliculatus_F_contig10162.187.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 126 bits (316), Expect = 7.850e-31 Identity = 75/158 (47.47%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLRP++++AV LR+H +D DGMAMYFAIG+ K G T +R V T+ + LL C SP+LA SV LEF +R N+RM++KN LP LGGHYNQ+ VE IQR TA+WD+ P+FP PAA DS+ G R L RS+ Sbjct: 607 LLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGL----------TDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSL 754
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.750e-21 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLPLGGHYNQHDVELIQRVTANWDAQRPIF 372 LLRP+++ AV LLRRH R +D + +A+Y+ G+T G T R V T++ LL C SPALAHS+ LEFK R N++M VKNL +GG ++Q D+E+IQR T +WD P+F Sbjct: 306 LLRPKAMDAVNLLRRHIEADRLSDPNDVALYYTTGKTTGGI----------TSRRCVRGTNSTEGYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVKNLSKEIGGCFDQFDIEIIQRETTSWDPDCPVF 429
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 4.450e-20 Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRHR-GRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVT 342 LLRP+S++AV LLR+H +D DG+AMY+A+G+T DG +R V T+ + LL C SPALA SV LEF FR N++M+VKN LP LG HYNQH VE+IQR T Sbjct: 651 LLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVN----------YRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT 766
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KP32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP32_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 2.490e-19 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 184 LLLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLL C SPALAHS+ LEF R N++M VKN +LP +GG ++Q D+E+IQR T +WD P+F +A D+ G RS LA+S+ Sbjct: 83 LLLSTYCASPALAHSILLEFNHRWNIKMAVKNRNLPKEIGGCFDQFDIEIIQRETTSWDLDSPVFSERVSALDAADTGQRSGLAQSM 169
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 5.580e-19 Identity = 60/158 (37.97%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLR +++ V LL +H +D +G+ +Y+ G+ G T R V T+ LL C SPALAHSV LEF FR NVRM VKN LP +G ++Q++ E+IQR TA+W P+FP +A D G RS L++S+ Sbjct: 14 LLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAAGITT----------HRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSGLSQSM 161
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.620e-18 Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLRP + +AV LLR+H +D + + +Y+ G+ G T R V T+ LL C SP+LAHSV LEF +R NVRM VKN LP +G ++Q ++E+IQR TA+W P+FP +A D+ G +S L+ S+ Sbjct: 287 LLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTR----------RCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESL 434
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 4.280e-17 Identity = 60/150 (40.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRHR-GRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCC---VSPALAHSVFLEFKFRQNVRMIVKNLDLPLGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLRP+S++AV LLR+H +D DG+AMY+AIG+T DG +R V T+ + H SPALA SV LEF FR N++M+VKN D WD P+FP+ AA DS+ G RS L RS+ Sbjct: 899 LLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGL----------VRYRCVRGTNDVEGYHLASYSASPALAQSVLLEFNFRWNLKMMVKNRD---------------------WDPSFPVFPQWQAAVDSVDTGERSGLGRSL 1017
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 7.430e-17 Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LLRP + +AV LLR+H +D + + +Y+ TK TT LL C SP+LAHSV LEF +R NVRM VKN LP +G ++Q ++E+IQR TA+W P+FP +A D+ G +S L+ S+ Sbjct: 287 LLRPCARQAVELLRKHIESGCLSDPERVPLYY----TKSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESL 431
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 5.970e-13 Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 1 Query: 1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LL P +++AVGLLR H R +D G+ +YF G+T G T +R V T++ LL C SP + H+V +EF R N+ V+N + +GG +Q+ ++ IQR TA W +P+F A D G R+ LA SV Sbjct: 361 LLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTSTGL----------TRFRCVRGTNSTEGYHRYLKTLLAAFCASPEVCHTVLMEFNHRWNISRAVENRGMAAEIGGFSHQYMIDHIQRATAEWYPDQPLFSGWVAPADFEDSGERAGLAASV 508
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 7.700e-8 Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 1 Query: 187 LLDHCCVSPALAHSVFLEFKFRQNVRMIVKN--LDLPLGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438 LL + C SP + H+V +EF R N+ V+N + +G +Q+ ++ IQRVTA W +P+F A D G R+ LA SV Sbjct: 752 LLAYFCASPEVCHTVLMEFNHRWNISRTVENRGMSAEIGRFSHQYMIDHIQRVTAEWYPDQPLFSGWVAPADFEDSGERTNLAASV 837 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10162.187.1 >prot_H-canaliculatus_F_contig10162.187.1 ID=prot_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=101bp MAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCCVSPALAHSback to top mRNA from alignment at H-canaliculatus_F_contig10162:103..761- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10162.187.1 ID=mRNA_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=659bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10162:103..761- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10162:103..761- >mRNA_H-canaliculatus_F_contig10162.187.1 ID=mRNA_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10162:103..761- (Hapterophycus canaliculatus Oshoro5f female)back to top |