mRNA_H-canaliculatus_F_contig1016.182.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A6H5JZ81_9PHAE (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ81_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.110e-108 Identity = 178/235 (75.74%), Postives = 190/235 (80.85%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLALPSQPRPPPNDGEEGXXXXXXXXXXRREGTAAAAGATSAVIPGGREGDVLWRSTPEERQLYSRIARRVEEALLQLEVEARRDLGADYPGRPPEPAAMIAAK 705 V+PIARG+GIDQRLLLNFYRRLLGGGWCHIFPEGHCEQ GSLGGR AG GRD+HGRLKWGVGKMIAHAPVTPVVIP+FHTGMA L+P+NP TRKILHA+PR+G+TVTARAG AI FDDLLEDHERRHG LRKLALP E XXXXXXXXXX GG EGDVLWRST EERQLYSRIARRVEEALLQLE EARRDLG YPG P E AA++AA+ Sbjct: 157 VMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQGGSLGGRAAGAGRDEHGRLKWGVGKMIAHAPVTPVVIPLFHTGMANLVPINPLTRKILHALPRMGHTVTARAGRAITFDDLLEDHERRHGRLRKLALPP---------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEGDVLWRSTREERQLYSRIARRVEEALLQLEAEARRDLGQRYPGYPAESAALLAAE 382
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: D7G278_ECTSI (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G278_ECTSI) HSP 1 Score: 157 bits (396), Expect = 3.120e-43 Identity = 76/134 (56.72%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLA 402 VLPI RG G+DQ+LLLNF R+L GGWCHIFPEG Q G++GGR D GRLKWGVG+MIAHAP TP V+P FHTGM L+ +P T+ +L P+ N +T R G AI +DLL HE HGPL K + Sbjct: 98 VLPIERGGGVDQKLLLNFSRKLAAGGWCHIFPEGKTVQTGTIGGRSPPASSDL-GRLKWGVGRMIAHAPRTPRVVPFFHTGMQNLVAEDPATKDVLPRQPQFLNDITVRVGDAIEVEDLLAQHEDEHGPLWKYS 230
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A835ZF50_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF50_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.090e-39 Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLALPSQPRPPP 429 VLPI RG GIDQ LL F RR+ G WCHIFPEG Q G +GGR G + G LKWGVGK+IAHAPV P ++PI+HTGM ++P +P TR +L P G+ +T R G I DDL+E +E+ +GPL K PS + PP Sbjct: 97 VLPIERGGGIDQVQLLKFARRMAAGTWCHIFPEGRTVQLGHMGGR-MGKNEAEIGTLKWGVGKLIAHAPVRPEIVPIYHTGMQNVVPEHPVTRDVLSPKPGTGHEITFRVGHPIVVDDLIEQYEKANGPLWKYT-PSVAKDPP 237
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A7S2NY36_9STRA (Tafazzin family protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NY36_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.470e-36 Identity = 83/214 (38.79%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKH----GRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLALPSQPRPPPNDGEEGXXXXXXXXXXRREGTAAAAGATSAVIPGGREGDVLWRSTPEERQLYSRIARRVEEALLQLE 630 VLPI R GIDQ LLL F R++ GG W H+FPEG Q G+LG G + GRLKWGVGK+IAH+P + +P ++TGM ++P T +I++ P GN V R G I F+DL+ +HE HGPL+K T+ G G +W+ST EE+ LYSRI +R+E+ LL LE Sbjct: 210 VLPIRRQGGIDQPLLLEFARKIAGGDWVHVFPEGKTNQGGTLGANYFGTRSREEAANIGRLKWGVGKLIAHSPKEVICVPFYNTGMEGVVPQKE-TGEIVYVYPMGGNHVQIRVGGRIYFEDLIAEHESIHGPLKKY-------------------------------------TTTPTNGSGNGIHMWKSTEEEKLLYSRITKRIEDQLLDLE 385
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A835ZCU4_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU4_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.930e-33 Identity = 65/99 (65.66%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAV 297 V+PIARG GIDQRLL N RRL G WCHIFPEG C Q GSL GR G GR + GRLKWGVGK+IAHAP PVV P+FHTGM + PL+P +RK V Sbjct: 216 VMPIARGEGIDQRLLQNMQRRLASGAWCHIFPEGSCFQTGSLSGR-TGEGRQRLGRLKWGVGKLIAHAPCPPVVFPLFHTGMQGVTPLHPNSRKYFSLV 313
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: F0WJG4_9STRA (Tafazzin family protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJG4_9STRA) HSP 1 Score: 128 bits (321), Expect = 6.670e-32 Identity = 64/124 (51.61%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 4 LPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHER 375 LPI RG G+DQ LL + + R+ G W HIFPEG QDGSLGGR G RDK GRLKWGVGK+IA A PVVIPI+H M +L+P + ++++ +PR N V R G I F+DL +++E+ Sbjct: 157 LPIKRGAGVDQELLHDIFERIQDGQWVHIFPEGKITQDGSLGGRE-GADRDKIGRLKWGVGKLIARADTPPVVIPIYHFNMNKLMPQDE-NNEVINVLPRTNNEVFVRVGQPIDFEDLFQEYEK 278
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A6U0TET4_9STRA (Tafazzin family protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TET4_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.070e-30 Identity = 78/207 (37.68%), Postives = 99/207 (47.83%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFT-RKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLALPSQPRPPPNDGEEGXXXXXXXXXXRREGTAAAAGATSAVIPGGREGDVLWRSTPEERQLYSRIARRVEEAL 618 VLPI RG GI+Q LL +F R L G WCHIFPEG Q LGGR + G+LKWGVGK+IAHAPV P +IP HTGM L+P +P + R L+ V + G I DDL+++ E +HG L K S N+ W S+ E+QLY +IA R+E+ L Sbjct: 64 VLPICRGGGINQNLLFDFARHLAAGEWCHIFPEGGAWQLNELGGRAKSASK---GKLKWGVGKLIAHAPVCPKIIPFAHTGMDNLLPQDPQSGRTYLNLFGSEPLHVRIKFGKEIHMDDLIDEFESKHGKLWKYDSTSDHCTEQNN---------------------------------------WESSDNEKQLYQKIALRIEQEL 228
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A482UYX2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UYX2_9ARCH) HSP 1 Score: 121 bits (304), Expect = 1.250e-30 Identity = 64/134 (47.76%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 1 VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLA 402 VLPI RG GI+Q LLL++ + G WCH+FPEG Q LGGR ++K GRLKWGVGK+IAH+P P VI F +GM IP +P T+ + VP G+ V R I FDDL++ HER +G + K Sbjct: 6 VLPILRGAGINQPLLLDYAHLVAAGEWCHMFPEGGIWQLPHLGGREGSSAQEK-GRLKWGVGKLIAHSPHRPHVIVFFFSGMETTIPQDPLTKAVKTVVPTPGHKVVVRFSEEIFFDDLIQAHERVYGKVWKYT 138
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: A0A024GSB4_9STRA (PlsC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSB4_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.590e-30 Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 4 LPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHER 375 LPI RG GI+Q LL + + R+ G W HIFPEG QDGSLGGR G RDK GRLKWGVGK+IA A TPVVIPI+H M +L+P + ++++ +PR N V R G I F+DL ++E+ Sbjct: 481 LPIKRGAGINQELLHDIFERIQDGQWVHIFPEGKITQDGSLGGRE-GPDRDKIGRLKWGVGKLIARADTTPVVIPIYHVNMNKLMPQDE-NNEVINVLPRANNHVFVRVGQPIDFEDLFREYEK 602
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Match: L1K3X0_GUITC (Tafazzin family protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3X0_GUITC) HSP 1 Score: 120 bits (302), Expect = 2.090e-29 Identity = 63/138 (45.65%), Postives = 84/138 (60.87%), Query Frame = 1 Query: 4 LPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLG-----GRPAGLGRDKHGRLKWGVGKMIAHAPVTPVVIPIFHTGMAQLIPLNPFTRKILHAVPRVGNTVTARAGSAIRFDDLLEDHERRHGPLRKLA 402 LPI RG G+DQ LL + R L G W H+FPE Q ++G R A R+ GRLKWGVGK+IAH+PVTP++IP++H GMA ++P ++L PR G V R G I+ DDL+ +HE +GPL K+ Sbjct: 101 LPIRRGGGVDQPLLFDVARELAAGRWVHVFPEARVVQSCTIGLDPLTRRTADELREM-GRLKWGVGKLIAHSPVTPIIIPLYHKGMAGVMPQK---NRLLSVFPRGGGYVVVRFGEEIKVDDLISEHESLYGPLPKVT 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1016.182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1016.182.1 >prot_H-canaliculatus_F_contig1016.182.1 ID=prot_H-canaliculatus_F_contig1016.182.1|Name=mRNA_H-canaliculatus_F_contig1016.182.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=238bp VLPIARGNGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRPAGLGback to top mRNA from alignment at H-canaliculatus_F_contig1016:93..2139+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1016.182.1 ID=mRNA_H-canaliculatus_F_contig1016.182.1|Name=mRNA_H-canaliculatus_F_contig1016.182.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2047bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1016:93..2139+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1016:93..2139+ >mRNA_H-canaliculatus_F_contig1016.182.1 ID=mRNA_H-canaliculatus_F_contig1016.182.1|Name=mRNA_H-canaliculatus_F_contig1016.182.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1428bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1016:93..2139+ (Hapterophycus canaliculatus Oshoro5f female)back to top |