mRNA_H-canaliculatus_F_contig10157.180.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10157.180.1
Unique NamemRNA_H-canaliculatus_F_contig10157.180.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.030e-87
Identity = 227/587 (38.67%), Postives = 290/587 (49.40%), Query Frame = 3
Query:  234 GVEAVT-FNSNCVRNHAALGNLPTDVRGEEEVA*VLDYVGGVQPCRGVCAQHVAAEAGMPAGSAEAFPTLVRKAERGQKLVERARGALEGFLRQRVFDRSSGGFRGSWFCGRTRCLVFEGM*WRGERVRRQ*LGTAGFVLQDVPAGGCKTADPQRP*RGRWEAHHHQQHDQRTKGITTPAIRWDTHCLILSMVVCCARLASSVPPFSPAHHATT*MSGSQAPTYCKRAEEG*RRKISTCGTNPRHEEGMRTAHGRTRRGCSQLPGPRGHEEDIRLEAPRGQRPETLL*CTLEWLYSVGGV*ACSLQPLGLGVYWGVRSRTTVPRCLLSCCNLRRHLQNATV----------------------VPR-------LQDIVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKIVATQYVEMFFVSLGKPEYKFVVWREAIRSLSTVYIQRMVMTAARYLACAHEDKGFDVIATVCDGASEQ 1877
            GV  +T  N +CVRNH AL    T +  E+++  +L+ V    PC+GV  QHV  +A MPAG+A+ FP+LVR+A+R           LE        +R           GR +    EG+   G       LGT G     VP  G                           G+    + W   C+ ++                      T   G  +   C+      R  +     N    E ++++          +   R  + D+ + +   + P          L+S     A  L           R RTT  R      ++R+      V                      +P+        +D V+WNT+ GKA+GFRF+ +T+RLA+YIQGIAGTAAYN+LRNV+HLPSP+RIK+LRRNAAPPR         KYGK+AA QDADK  L GVL WDLMHLNKNGFSFAPNGGG TGLVD  TFFNPI+       + ++  LEKIVATQYVEMFFVS+GKPEYKFVVWREA+RSLST YIQRM++ A RYLA AH DK FDVIAT CDGA E 
Sbjct:  172 GVGPITSINGHCVRNHDALRRF-TAIGAEDDLTELLNVVWYTLPCQGVSQQHVREDAKMPAGAADVFPSLVRQAQRN----------LESNPTLPFGER-----------GRWQNAFVEGL-LSGPSGVSGVLGTVGG--HSVPGHG---------------------------GVGGHKVFWAKGCVGVA----------------------TPFQGLNSVPRCQGCRGFVREALRPRLQNASKAESLKSS--------KNIYMTRAQKVDVTIVSAPQRVPRIT-----SKLWST----AADLN----------RERTTTARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEH 657          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 5.970e-86
Identity = 151/213 (70.89%), Postives = 174/213 (81.69%), Query Frame = 3
Query: 1266 QDIVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKIVATQYVEMFFVSLGKPEYKFVVWREAIRSLSTVYIQRMVMTAARYLACAHEDKGFDVIATVCDGASEQ 1877
            +D V+WNT+ GKA+GFRF+ +T+RLA+YIQGIAGTAAYN+LRNV+HLPSP+RIK+LRRNAAPPR         KYGK+AA QDADK  L GVL WDLMHLNKNGFSFAPNGGG TGLVD   FFNPI+       + ++ TLEKIVATQYVEMFFVS+GKPEYKFVVWREA+RSLST YIQRM++   RYLA AH DK FDV+AT+CDGA E 
Sbjct:  536 EDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEH 748          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 2.120e-84
Identity = 151/217 (69.59%), Postives = 174/217 (80.18%), Query Frame = 3
Query: 1254 VPRLQDIVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKIVATQYVEMFFVSLGKPEYKFVVWREAIRSLSTVYIQRMVMTAARYLACAHEDKGFDVIATVCDGASEQ 1877
            +P  QD V+WNT+ GKA+GFRF+ +T+RLA+YIQGIAGTAAYN+L NV+HLPSP+RIK+LRRNAAPPR         K GK+AA QD DKA L GVLAWDLMHLNKNGFSFAPNGGG TGLVD  TFFNPI+       + ++  LEKIVATQYVEM+FVS+GKPEYKFVVWREA+RSLST +IQRM++   R LA AH DK FDVIATVCDGA  Q
Sbjct:  299 LPCAQDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQ 515          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 5.040e-81
Identity = 135/213 (63.38%), Postives = 167/213 (78.40%), Query Frame = 3
Query: 1266 QDIVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKIVATQYVEMFFVSLGKPEYKFVVWREAIRSLSTVYIQRMVMTAARYLACAHEDKGFDVIATVCDGASEQ 1877
            +D +RWNT    ++GFRF+ +TLR+A+Y+ G+AG+A YN+LRN IHLPSP+R+++L+  AAPPR         KYG++AA QDADKA LTGVL+WDL HL+KNG  FAP  G LTGLVD ATFFNP++  + +E+ GL   L KI+ATQYVE FFVSLG PEYKFVVWREA+RSLST YIQRM+    R+L+ AH DKGFDV+ATVCDGASEQ
Sbjct:   63 EDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVE-FFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLSIAHRDKGFDVVATVCDGASEQ 274          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 6.300e-58
Identity = 127/281 (45.20%), Postives = 163/281 (58.01%), Query Frame = 2
Query: 2807 QVFSGTIVGAIRKCQADRERRGQHRDLALEGYEELASMIDLFVDIFNG-----------------------NYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDILHF-DGWREVLQELSPPTGAGTSNWKKHFITRESWHDLRACALGFLSTSRYLF*NSDRFNVDSLSPNTGRFINPRTMSQDILEHRFAHIQARLGTQRNPTSTEAKERSLRGDINRGLHGGSRGNFNRNAQKGADSNVSSFRGVIMLEVSKAERDAAVRARSRKSMEAVVFPRYISV 3577
            +V SGTIV  I K Q D    G+  DL L+ Y  LA+ +D F+DIFNG                       N+ R++  RR G+ K  GY++SA+D  L+ L++++ F D WR  LQE    T  G   WKKHFIT  SW D+R C LGF+S  RYLF    RF V    P    FIN R   QD++EH F H++  LG+ RNPT+ +AKER  RGDI RGLHG  R N+NRNA+KG D   S +R  +ML V + ER   +RAR++ S EAV+ P YISV
Sbjct:  480 KVLSGTIVCMIEKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGKLYIIFVLAYCLVFLKQQMWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQE---KTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRP-WPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISV 756          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 8.710e-58
Identity = 123/271 (45.39%), Postives = 163/271 (60.15%), Query Frame = 2
Query: 2783 SPYPRSPTQVFSGTIVGAIRKCQADRERRGQHRDLALEGYEELASMIDLFVDIFNGNYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDILHF-DGWREVLQELSPPTGAGTS-NWKKHFITRESWHDLRACALGFLSTSRYLF*NSDRFNVDSLSPNTGRFINPRTMSQDILEHRFAHIQARLGTQRNPTSTEAKERSLRGDINRGLHGGSRGNFNRN--AQKGAD--SNVSSFRGVIMLEVSKAERDAAVRARSRKSMEAVVFPRYISV 3577
            SP+     QV SG I+ AI        R G     A E Y+ LA  ++ FVDIFNGNY R++++R+ G  K  G + S E   + RL++IL F D W+  L+    P+G G    WKKHFIT +SW DLR   LGF+S  RYLF + +RF +DSLSPN  RF++PR  SQDI EHRF+HI+A LGT RNPT+ EAK+RS  GD+ R  +G  R N +RN  A+ G D   +  S +  I+L V+K E    VRA  R +   V+ PRY+ +
Sbjct:   15 SPFSHGVVQVVSGMIIDAIADYMEANGRNG-----AAECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYMDI 280          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.080e-50
Identity = 96/145 (66.21%), Postives = 114/145 (78.62%), Query Frame = 3
Query: 1266 QDIVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKI 1673
            +D V+WNT+ GKA+GFRF+ +T+RLA+YIQGIAGTAAYN+L NV+HLPSP+RIK+LRRNAAPPR         KYGK+AA QDADK  L GVL WDLMHLNK+GFSF PNGGG TGLVD  TFFNPI+       R ++ TLEK+
Sbjct:  403 EDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKSGFSFTPNGGGFTGLVDETTFFNPIYKHEGGVVREVEPTLEKL 547          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5KQL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 5.460e-44
Identity = 91/214 (42.52%), Postives = 133/214 (62.15%), Query Frame = 3
Query: 1272 IVRWNTTEGKARGFRFNTSTLRLAVYIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPP----------RKYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFF-NPIFNER-CEEERGLKTTLEKIVATQYVEMFFVSLGKPEYKFVVWREAIRSLSTVYIQRMVMTAARYLACAHEDKGFDVIATVCDGASEQ 1877
            ++ +N  +G ++G+RF+   LR A+Y     G+A YN++++V+HLPS   ++++RR AA              YGKMAA  +  +  L G+L WDLMHLN NGF   PNGGG+ GLVD  +   +P+   +   +   L+ TLE  VATQY+E+F+VS+G  +YKF V+REA++ L+   ++RM+      L   HEDK FDVI TVCDGA+E 
Sbjct:    1 MMNYNKFQGSSKGWRFSPKVLRWALYALANMGSAGYNVIQDVLHLPSIGHLRKVRRAAAGTTTWGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVADNISLEETLETFVATQYLEVFWVSIGNLKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTVHEDKQFDVICTVCDGAAEH 214          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 5.680e-42
Identity = 120/308 (38.96%), Postives = 146/308 (47.40%), Query Frame = 2
Query: 2810 VFSGTIVGAIRKCQADRERRGQHRDLALEGYEELASMIDLFVDIFNG--------------------------------------------------NYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDIL-HFDGWREVLQELSPPTGAGTSNWKKHFITRESWHDLRACALGFLSTSRYLF*NSDRFNVDSLSPNTGRFINPRTMSQDILEHRFAHIQARLGTQRNPTSTEAKERSLRGDINRGLHGGSRGNFNRNAQKGADSNVSSFRGVIMLEVSKAERDAAVRARSRKSMEAVVFPRYISVD 3580
            V SGTIV AIR+ +A+RE RG+  DLAL  YE LA  ++ FVDIFNG                                                  +Y RT+ ERR  I+K KGYVTSA+DPIL+RLV+IL +FD W +                                                                   M Q ILEHRF  ++A LGT RNPT+ +AKERS+RGD+NRGLHGGSR NFNRNA+ G D   S +R  IML V++AE    VRARSR S  AV+ PRYISV+
Sbjct:   95 VVSGTIVRAIREVRANRETRGEPPDLALGCYEGLAVHLNDFVDIFNGEETKCGLTRKRRHTCNIESKSPGRGVKLKVAAINSYVPFTRSDHFAVHTGDYGRTKFERRAQINKMKGYVTSADDPILERLVEILRYFDDWND-------------------------------------------------------------------MMQIILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVE 335          
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 2.040e-38
Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 3
Query: 1347 YIQGIAGTAAYNLLRNVIHLPSPQRIKELRRNAAPPR---------KYGKMAAFQDADKATLTGVLAWDLMHLNKNGFSFAPNGGGLTGLVDTATFFNPIFNERCEEERGLKTTLEKIVATQYVEMFF 1703
            Y+ G+AG+A YN+LRN IHLPSP+R++ L   AAPPR         KYG++AA QDADKA LTGVL+WDL HL+KNGF FAP  GG TGLVD ATFFNP++  + +E+  L   L+KI+AT+YVE  F
Sbjct:  149 YMHGVAGSAGYNMLRNFIHLPSPRRVQRLEAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYVERTF 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FZI2_ECTSI1.030e-8738.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVF4_9PHAE5.970e-8670.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5M0_9PHAE2.120e-8469.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5R1_ECTSI5.040e-8163.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR14_9PHAE6.300e-5845.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5I6_9PHAE8.710e-5845.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2I2_ECTSI2.080e-5066.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQL9_9PHAE5.460e-4442.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6I9_9PHAE5.680e-4238.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM8_ECTSI2.040e-3858.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10157contigH-canaliculatus_F_contig10157:88..5020 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons7
Model size3768
Cds size780
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928644.9129674-UTR-H-canaliculatus_F_contig10157:87..2811622928644.9129674-UTR-H-canaliculatus_F_contig10157:87..281Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 88..281 +
1696845510.6896863-UTR-H-canaliculatus_F_contig10157:87..2811696845510.6896863-UTR-H-canaliculatus_F_contig10157:87..281Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 88..281 +
1622928644.924647-UTR-H-canaliculatus_F_contig10157:442..5801622928644.924647-UTR-H-canaliculatus_F_contig10157:442..580Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 443..580 +
1696845510.701576-UTR-H-canaliculatus_F_contig10157:442..5801696845510.701576-UTR-H-canaliculatus_F_contig10157:442..580Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 443..580 +
1622928644.938341-UTR-H-canaliculatus_F_contig10157:778..19031622928644.938341-UTR-H-canaliculatus_F_contig10157:778..1903Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 779..1903 +
1696845510.7112312-UTR-H-canaliculatus_F_contig10157:778..19031696845510.7112312-UTR-H-canaliculatus_F_contig10157:778..1903Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 779..1903 +
1622928644.9487796-UTR-H-canaliculatus_F_contig10157:2128..23651622928644.9487796-UTR-H-canaliculatus_F_contig10157:2128..2365Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 2129..2365 +
1696845510.7211173-UTR-H-canaliculatus_F_contig10157:2128..23651696845510.7211173-UTR-H-canaliculatus_F_contig10157:2128..2365Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 2129..2365 +
1622928644.9652638-UTR-H-canaliculatus_F_contig10157:2631..33681622928644.9652638-UTR-H-canaliculatus_F_contig10157:2631..3368Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 2632..3368 +
1696845510.7310343-UTR-H-canaliculatus_F_contig10157:2631..33681696845510.7310343-UTR-H-canaliculatus_F_contig10157:2631..3368Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 2632..3368 +
1622928645.0015237-UTR-H-canaliculatus_F_contig10157:4324..43991622928645.0015237-UTR-H-canaliculatus_F_contig10157:4324..4399Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 4325..4399 +
1696845510.7606936-UTR-H-canaliculatus_F_contig10157:4324..43991696845510.7606936-UTR-H-canaliculatus_F_contig10157:4324..4399Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 4325..4399 +
1622928645.0114489-UTR-H-canaliculatus_F_contig10157:4538..50201622928645.0114489-UTR-H-canaliculatus_F_contig10157:4538..5020Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 4539..5020 +
1696845510.7764447-UTR-H-canaliculatus_F_contig10157:4538..50201696845510.7764447-UTR-H-canaliculatus_F_contig10157:4538..5020Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10157 4539..5020 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928644.9755926-CDS-H-canaliculatus_F_contig10157:3368..38851622928644.9755926-CDS-H-canaliculatus_F_contig10157:3368..3885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10157 3369..3885 +
1696845510.7420216-CDS-H-canaliculatus_F_contig10157:3368..38851696845510.7420216-CDS-H-canaliculatus_F_contig10157:3368..3885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10157 3369..3885 +
1622928644.9888594-CDS-H-canaliculatus_F_contig10157:4061..43241622928644.9888594-CDS-H-canaliculatus_F_contig10157:4061..4324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10157 4062..4324 +
1696845510.750966-CDS-H-canaliculatus_F_contig10157:4061..43241696845510.750966-CDS-H-canaliculatus_F_contig10157:4061..4324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10157 4062..4324 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10157.180.1prot_H-canaliculatus_F_contig10157.180.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10157 3369..4324 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10157.180.1

>prot_H-canaliculatus_F_contig10157.180.1 ID=prot_H-canaliculatus_F_contig10157.180.1|Name=mRNA_H-canaliculatus_F_contig10157.180.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=260bp
MSRYLRGWCTALSLYLCLGHFFCVSHLCARKSIVPVPPPRVFMLVKSHVF
VRTSTGTCFLVIQPQQHSELTFPYIEAGAIALARGQASHLGLARTKCGPN
RLLPWSHLTWLLVPLKPSPYPRSPTQVFSGTIVGAIRKCQADRERRGQHR
DLALEGYEELASMIDLFVDIFNGNYDRTQLERRTGIHKRKGYVTSAEDPI
LKRLVDILHFDGWREVLQELSPPTGAGTSNWKKHFITRESWHDLRACALG
FLSTSRYLF*
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mRNA from alignment at H-canaliculatus_F_contig10157:88..5020+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10157.180.1 ID=mRNA_H-canaliculatus_F_contig10157.180.1|Name=mRNA_H-canaliculatus_F_contig10157.180.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4933bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10157:88..5020+ (Hapterophycus canaliculatus Oshoro5f female)
AGAAGCATGCCAAGCATTTCGGCCTCGGCGAGATCGCTAATAACGTCACC CCAACCGAGTTTTCGCTGGTTGCGAAAGGCTTCAAGCAGTGGTCTTCTAC CCTTTCCGGGCTGTGGCCGCCGCAGTGGTCCGTCGTCGATCGCTCGAGTG GAGACGTGTCTTTATCCACAGACGCCAAAGGGGCGGAAGTGAAGGTCTGT GTACACGACCACTCCCGGCTGTTCGAATTATGGTCCCAATGATAAGCTGC TGCAATAGCTTGTTCACTACTCCAGTTTCCCGTGAAGTCTTCGTTATGGC AAGAATGAATCAGACACCTCAGCCGAAAGCGCTGATGCTCTGCTCCATGA ATCAGGTTGTCCTTCGATACAACGACGGCGCGGGCGGCGGCGGCGGGGTC GAGGCCGTGACGTTCAACAGCAACTGCGTCAGGAACCACGCCGCACTGGG GAACCTCCCTACCGATGTCAGGGGGGAGGAAGAAGTAGCGTAGGTGAAGG CAGACAGCAGCTGGTAGTACCGATTGAAGCCGTCCGAATTCAGGCGTGGT CCATGGCGCCCCTCAATGACGGGCACGGCTGTACGTCTGAGGGTCTACTT TATCACGCTCCTCCCTGGCCTGCCCCTCTGCATATCCGCTCATCACCTTC GTCTCGTCGTCCCGTTGCCTACCATTGCTGTGTATCCACAGGTTCTGGAT TACGTGGGCGGTGTACAACCTTGTCGCGGTGTGTGTGCGCAGCATGTCGC CGCCGAGGCCGGTATGCCCGCGGGGTCTGCGGAGGCGTTCCCGACCTTGG TCCGCAAGGCAGAGCGTGGGCAAAAGCTTGTCGAACGCGCACGAGGGGCG CTGGAAGGATTCCTGCGTCAGAGGGTTTTTGACAGGTCATCGGGGGGTTT CAGGGGTTCTTGGTTTTGTGGGAGGACAAGATGTCTTGTGTTCGAAGGCA TGTGATGGCGTGGCGAGCGCGTACGACGGCAATAGCTCGGTACCGCGGGG TTCGTACTGCAAGACGTTCCGGCGGGAGGCTGTAAAACCGCGGATCCGCA ACGCCCTTAAAGAGGACGTTGGGAGGCGCACCACCACCAGCAACATGACC AGCGCACAAAAGGTATCACTACCCCAGCCATACGATGGGATACGCACTGT CTTATTTTGTCGATGGTTGTGTGTTGTGCTCGGCTGGCAAGCTCTGTCCC CCCGTTTAGTCCGGCACACCACGCCACGACTTAAATGTCAGGATCACAAG CTCCGACGTACTGCAAAAGAGCTGAAGAAGGCTAACGAAGGAAAATCTCG ACTTGTGGAACGAATCCTCGCCATGAGGAAGGAATGCGTACAGCTCACGG GAGAACAAGGAGAGGCTGTTCACAACTTCCTGGTCCACGAGGACACGAGG AGGATATTCGACTCGAAGCTCCCAGAGGGCAGCGACCAGAGACACTTCTA TGATGCACGCTGGAGTGGTTGTACTCGGTGGGCGGGGTGTAGGCGTGTTC CTTACAACCATTAGGGTTAGGGGTGTATTGGGGAGTGAGGAGCCGGACCA CGGTCCCACGTTGCTTGCTTTCCTGTTGCAACCTTCGGCGCCACCTTCAA AACGCGACCGTTGTCCCCCGCTTACAGGACATTGTCAGGTGGAACACGAC GGAGGGAAAGGCTAGAGGGTTCCGGTTCAACACGTCTACGCTGAGGCTGG CCGTCTACATCCAGGGTATAGCGGGCACGGCCGCGTACAACCTGTTACGA AACGTTATACACCTCCCAAGCCCTCAACGAATCAAGGAGTTGCGCCGGAA TGCGGCTCCTCCCAGGGTAGGAGTGCTGGTCGAAAACATCCAGGTGGTGT GCGCGTTGTTGAATCTAGGTCTGCCAACACGCAGAGCTTCGGCGTCGTGC AACAAAGTAAGGATCCGTTATTGATGCAGGTGAATTGTCATTTCCTGAGC ACGAGTCTAGGTATGGTGCTGCTCTGTTGGGTTAGGGCCTGGGAATTTAA CACATGCGCCCCCCCTCACGCCTCCCGTGCTTGTTCCGCAGAAGTATGGG AAAATGGCCGCATTCCAAGACGCGGACAAGGCGACCCTCACGGGGGTTCT GGCGTGGGACCTCATGCACCTGAACAAGAACGGCTTCAGCTTCGCTCCGA ACGGGGGAGGGCTCACGGGCCTGGTGGATACGGCGACGTTCTTCAACCCC ATCTTCAACGAGCGTTGTGAAGAAGAGCGGGGCCTAAAGACAACGCTGGA GAAGATCGTCGCCACGCAATACGTGGAGGTACTTTGAAGTCGAAGCTCGG GCGTAGTAAAAACTAGTCGGATATCGCGACTAGTGTAGAGAATAGGAGGA CCCCTCGGAGAGCTGGAGAACTAATGAGTACCCACCCTTCCGATCTCCTG GCCTATCACCCACAACTTTGAGCTGAGGTCCACAGTGACGTTTGGATCCT CCTTCCCAGTACTTCGCCCTGATACCTGCCTCTGTCCCTCCCCCCGCCCC GCTTACTTTTATTGCCACGCTCATAACCGATCCGACCTTGGCAGATGTTC TTCGTTAGTCTGGGGAAGCCGGAATACAAGTTCGTGGTCTGGCGCGAGGC GATCCGGTCTCTCAGCACGGTCTACATCCAACGCATGGTTATGACGGCAG CGCGGTACCTGGCGTGTGCCCATGAGGACAAAGGTTTCGACGTCATTGCC ACGGTGTGCGACGGGGCATCTGAACAGTGAGCGCTAATTTTTGTCGCTTC TACGGCTGTCTCAAGCGACCTAGGGTGGCCCGGGTGGCCTTCGATATTTT TTCGGGGCGGCAGGGGGGGAAGGGGCTTGAGCTTTGCGCTCTCAGATTAC GAAACGAAATAAGTGTTCGCATCACTTGCAATCCAAGCCCAACCTCGCGC CCTCCCCCTCCCCGACTCCTGTCCCCTCTTCACCTCGCAGCCGCTCCTTC CAGACGCACGCCGCAACTGTAACGTTCGAGGCTTTCTGCGAGGGAGAGAG AGAGATACCCTTTGCAGGCTTCGCGGTGGGCTTCCTTCATCCTGTTCACC TCCATGAGATCTTAAACATGAGCGATCCCATGCACATCCTCAAGAAGATT GTCAACGCTTTATGGCACAGCGACATCTCCCACAAGAAACGAGAACTGGG TATGTGGCGCGTGAACCACGAGATCCAGTTCGACGGCGACACCCTGACGC CTGAGGAACGAGCTGCCACTCTCACCACTTTTCGCAAGCTCGAACCGGGC ATCTTCCACAGAGACAATCACAACTGCATGAATGTCCAGATATCTGCGAG GGTGGTGTACAGCACTTTCTTTGTATCTTTGTCTTGGCCACTTTTTTTGT GTGTCGCACTTGTGCGCCCGCAAGAGCATCGTCCCAGTCCCTCCACCAAG GGTTTTCATGTTGGTGAAGTCGCATGTTTTCGTCCGGACTTCGACAGGCA CCTGCTTTCTGGTGATCCAGCCGCAGCAGCACAGTGAACTTACCTTCCCG TATATCGAGGCGGGAGCGATAGCTCTAGCTCGCGGTCAGGCGTCGCATTT GGGTTTGGCGCGGACTAAATGCGGCCCCAACCGGCTTCTCCCGTGGTCCC ACCTCACCTGGCTCTTGGTTCCCTTAAAACCCTCCCCCTATCCTCGTTCG CCGACCCAGGTGTTCTCGGGAACCATCGTCGGAGCGATTCGCAAGTGTCA GGCCGATCGCGAAAGGAGGGGCCAGCATCGCGATCTGGCGTTGGAGGGCT ACGAAGAGCTCGCCTCGATGATCGATCTCTTTGTGGATATCTTTAACGGC AAGTGCAACGAGGGTCGATCATCTGGCGGAGTCTCTCACGTTCTGTATAT GGCTCAACGGTCGCCAATCTACGCTCCTGGTCGACACCAACACTGCTGAA GCTAAACGCTGTATTTTCCTTTCACCTCTTTCGAACATCCTGTCCGCATC TGTCGTCAAAATAAATACATTCAGGCAACTACGACCGGACGCAACTCGAG CGCCGGACGGGCATCCACAAGAGAAAGGGCTACGTGACATCAGCTGAGGA CCCCATCCTCAAACGACTCGTAGACATCCTGCATTTCGACGGCTGGCGGG AGGTGCTGCAGGAGTTATCCCCCCCTACAGGCGCCGGGACCTCCAACTGG AAGAAGCATTTCATTACACGTGAATCGTGGCACGACTTGCGGGCGTGCGC CCTCGGTTTCCTGAGCACCAGCCGCTACTTGTTCTAGAACTCAGACAGGT TCAACGTGGACAGTCTCTCCCCCAACACCGGGCGGTTCATTAACCCACGC ACCATGAGCCAGGTCCGTTTTAATGCCCGGCCGATTCCCGGTCACGACAT ATTCGTCGCGTAGCCATCCCGATTGCAATTGACAGTGCCCCCCCCCCCCT AATCCCCCCTTCGTTGCACCCCCGCCCCCACCCCTTCCTTCTTCGTATCA GGACATCCTGGAACACAGGTTTGCGCACATACAAGCTAGGCTCGGGACGC AGAGGAACCCAACTTCCACAGAAGCAAAGGAGAGGTCCTTGCGAGGGGAC ATCAATCGTGGGCTTCACGGCGGTTCCCGAGGGAATTTCAACAGAAACGC GCAGAAGGGGGCGGATTCCAATGTTTCGAGTTTCCGAGGGGTTATCATGT TGGAAGTATCGAAGGCAGAGCGAGATGCTGCGGTGCGAGCGCGCTCTAGA AAATCTATGGAGGCTGTTGTCTTCCCTCGGTACATCAGCGTAGATCATGC ACAGACGGGTGAAGAGAGTCCTACGGCATCGTCGGACTCTGCTCCGGCGG CAGTCGGCATCTAGGTAGTGAACTATTCTTCCCCGTTAGAGCGGGAAGCA TGCGTCGTGGCGAGTGTGCGGCCTGCGTACCATGTAGCCTTTTTTCCTTT CAGCCGTTTTCTTAAAGTGTTTTAGGTGGTGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10157:88..5020+

>mRNA_H-canaliculatus_F_contig10157.180.1 ID=mRNA_H-canaliculatus_F_contig10157.180.1|Name=mRNA_H-canaliculatus_F_contig10157.180.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1560bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10157:88..5020+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCCAGATATCTGCGAGGGTGGTGTACAGCACTTTCTTTGTATCTTTG
TCTTGGCCACTTTTTTTGTGTGTCGCACTTGTGCGCCCGCAAGAGCATCG
TCCCAGTCCCTCCACCAAGGGTTTTCATGTTGGTGAAGTCGCATGTTTTC
GTCCGGACTTCGACAGGCACCTGCTTTCTGGTGATCCAGCCGCAGCAGCA
CAGTGAACTTACCTTCCCGTATATCGAGGCGGGAGCGATAGCTCTAGCTC
GCGGTCAGGCGTCGCATTTGGGTTTGGCGCGGACTAAATGCGGCCCCAAC
CGGCTTCTCCCGTGGTCCCACCTCACCTGGCTCTTGGTTCCCTTAAAACC
CTCCCCCTATCCTCGTTCGCCGACCCAGGTGTTCTCGGGAACCATCGTCG
GAGCGATTCGCAAGTGTCAGGCCGATCGCGAAAGGAGGGGCCAGCATCGC
GATCTGGCGTTGGAGGGCTACGAAGAGCTCGCCTCGATGATCGATCTCTT
TGTGGATATCTTTAACGATGTCCAGATATCTGCGAGGGTGGTGTACAGCA
CTTTCTTTGTATCTTTGTCTTGGCCACTTTTTTTGTGTGTCGCACTTGTG
CGCCCGCAAGAGCATCGTCCCAGTCCCTCCACCAAGGGTTTTCATGTTGG
TGAAGTCGCATGTTTTCGTCCGGACTTCGACAGGCACCTGCTTTCTGGTG
ATCCAGCCGCAGCAGCACAGTGAACTTACCTTCCCGTATATCGAGGCGGG
AGCGATAGCTCTAGCTCGCGGTCAGGCGTCGCATTTGGGTTTGGCGCGGA
CTAAATGCGGCCCCAACCGGCTTCTCCCGTGGTCCCACCTCACCTGGCTC
TTGGTTCCCTTAAAACCCTCCCCCTATCCTCGTTCGCCGACCCAGGTGTT
CTCGGGAACCATCGTCGGAGCGATTCGCAAGTGTCAGGCCGATCGCGAAA
GGAGGGGCCAGCATCGCGATCTGGCGTTGGAGGGCTACGAAGAGCTCGCC
TCGATGATCGATCTCTTTGTGGATATCTTTAACGGCAACTACGACCGGAC
GCAACTCGAGCGCCGGACGGGCATCCACAAGAGAAAGGGCTACGTGACAT
CAGCTGAGGACCCCATCCTCAAACGACTCGTAGACATCCTGCATTTCGAC
GGCTGGCGGGAGGTGCTGCAGGAGTTATCCCCCCCTACAGGCGCCGGGAC
CTCCAACTGGAAGAAGCATTTCATTACACGTGAATCGTGGCACGACTTGC
GGGCGTGCGCCCTCGGTTTCCTGAGCACCAGCCGCTACTTGTTCTAGGCA
ACTACGACCGGACGCAACTCGAGCGCCGGACGGGCATCCACAAGAGAAAG
GGCTACGTGACATCAGCTGAGGACCCCATCCTCAAACGACTCGTAGACAT
CCTGCATTTCGACGGCTGGCGGGAGGTGCTGCAGGAGTTATCCCCCCCTA
CAGGCGCCGGGACCTCCAACTGGAAGAAGCATTTCATTACACGTGAATCG
TGGCACGACTTGCGGGCGTGCGCCCTCGGTTTCCTGAGCACCAGCCGCTA
CTTGTTCTAG
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