mRNA_H-canaliculatus_F_contig10153.176.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10153.176.1
Unique NamemRNA_H-canaliculatus_F_contig10153.176.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: D8LIU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU9_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 1.860e-156
Identity = 284/323 (87.93%), Postives = 293/323 (90.71%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLKALV 969
            RFAGTLLACFVIGAAGTVIGTA AAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADA+VAGLAADNMVVSLYFIFLFWITKP+++EE   + +  T   S K     XXXXXXXXXXXXXXXXXXXXXXXX           YALTAACALCLCGELLSK+AFGGRVSAIPLVTL TVAGATAAPSWVGRLG VGAQLG+LLMQLFFAVTGAQGSLAVVMGTAPSLLVFS+V QIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLKALV
Sbjct:  237 RFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAIVAGLAADNMVVSLYFIFLFWITKPDRQEEPTPATT--TRQGSTKAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALTAACALCLCGELLSKVAFGGRVSAIPLVTLVTVAGATAAPSWVGRLGSVGAQLGILLMQLFFAVTGAQGSLAVVMGTAPSLLVFSLV-QIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLKALV 556          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A6H5L155_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L155_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.650e-141
Identity = 245/295 (83.05%), Postives = 257/295 (87.12%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLP 885
            RFAGTLLACFVIGAAGTVIGTA AAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFW+TKP+++E++A +   G    S K                      XXXXXXX PLAVTKE+ISYALTAACALCLCGELLSK+AFGGRVSAIPL+TL TVAGATAAPSWVGRLG VGAQLG+LLMQLFFAVTGAQGSLAVVMGTAPSLLVFS+V QIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNL  P
Sbjct:  296 RFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWVTKPDRQEQSAPATREG----STKAIGSAQEEAAPTATPQPLSAATXXXXXXXXPLAVTKETISYALTAACALCLCGELLSKVAFGGRVSAIPLLTLVTVAGATAAPSWVGRLGSVGAQLGILLMQLFFAVTGAQGSLAVVMGTAPSLLVFSLV-QIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLASP 585          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A835YW30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW30_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.170e-98
Identity = 178/324 (54.94%), Postives = 220/324 (67.90%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLKALVG 972
            +++GTL+ACF++GA GTV+GT VAA +VPLG+G DGWKIA+ALA+RHIGGAVNYVAV ETL +SA+AVVAGLAADN+VV+LYF FLF++ K +          AGT A                                  PL V K+ ++YAL A CAL   G  ++     G +S IP+ +L TVA A+A P  +  LG  GAQ+GVL MQLFFAVTGA GS+AVVM TAP+LL FS + QIA H+   VG GR  RLPF +L LASNANVGGPTTAAA AA+K W  LVLPALLTG+LGYA ATF+G+G+G A L+ ++G
Sbjct:   83 KYSGTLMACFMLGAVGTVLGTVVAAKLVPLGMGADGWKIAAALASRHIGGAVNYVAVAETLSMSAEAVVAGLAADNLVVALYFAFLFYMAKGD----------AGTAAGGGDAPETPSGGGGEGDMGPPTVDPAS-------PL-VGKDGLAYALAAGCALTFAGNAIAAGPLRGAISGIPITSLLTVAAASAFPKVLAPLGVAGAQVGVLFMQLFFAVTGASGSIAVVMRTAPTLLAFSAI-QIAAHYAFTVGAGRALRLPFNQLLLASNANVGGPTTAAAFAASKRWSALVLPALLTGILGYAVATFVGIGLGQAVLRGMMG 387          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A7S3XZE0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZE0_HETAK)

HSP 1 Score: 248 bits (634), Expect = 1.580e-75
Identity = 154/315 (48.89%), Postives = 198/315 (62.86%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWIT-KPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGI 942
            R  G+++A F++GA GT++GT V A +VPLGLG D WK+ +AL ARHIGGAVNYVAV ET+ +  DA+ AGLAADN+V++LYF F+FW+  K     + AA  S       A                                L    +S+S+     C LCL   + +K  F   +S IP+V++ATVA A+ AP     L   G ++GV LMQLFFA TGA G +A V+ TAP + VFSVV Q+A+HFGVLVG GR   LP R+L LASNANVGGPT+AAAMA AK W +LVLP+LL G+ GYATATF+G+G+
Sbjct:  174 RSTGSMMAAFLLGALGTIVGTLVGARLVPLGLGEDSWKVVAALCARHIGGAVNYVAVSETVAMGPDALTAGLAADNLVIALYFSFIFWLANKAPDDGDGAAQVSNSQGGGGADDSPQVAGNQFN--------------------LLNVMKSVSFG----CTLCLISSI-TKAFFYPGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVV-QVALHFGVLVGGGRALGLPLRKLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGL 462          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A1E7EVM0_9STRA (DUF819-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM0_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.840e-70
Identity = 147/320 (45.94%), Postives = 197/320 (61.56%), Query Frame = 1
Query:   10 GTLLACFVIGAAGTVIGTAVAAAVVPL-GLGGD-GWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEK-KEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFL 957
            GTLL  F +GA  TV  T +   ++PL  LGGD GW++A ALAARHIGGA+N+VAV ETL +  DAV A +AADN+VV+LYF FLF I K +  K++    A   T++  A                               P ++T  +++ +L+ A +L   G  L+K+     VS++PL++  TV  ATA P +   L   G  LGV+ +Q+FFA +GA GS+ +V+  APSL  FS + QI +HF  L+ +GR +F+LP REL LASNANVGGPTTAAAMA AK WK LVLPALL G+LGY+TAT + +G+G   L
Sbjct:   80 GTLLTAFGVGAFATVFATIITFPIIPLKSLGGDVGWRVACALAARHIGGAINFVAVAETLNIGGDAVAAAIAADNVVVALYFAFLFSIAKADNPKDDDDDEAQQFTISEVA--------------------------VEDGKPSSITLPTLAISLSVASSLVTAGTFLTKVLLPAGVSSLPLISTLTVIAATAFPKFFSSLSETGTALGVIFVQMFFACSGAAGSIRMVLEKAPSLFAFSAL-QIGIHFATLMAIGRGIFKLPKRELYLASNANVGGPTTAAAMAQAKEWKKLVLPALLIGILGYSTATALALGLGPILL 372          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: B8C2C6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2C6_THAPS)

HSP 1 Score: 230 bits (586), Expect = 3.670e-69
Identity = 154/329 (46.81%), Postives = 205/329 (62.31%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWI------TKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYAL-TAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLK 960
            R AG+LL  F++GA  TV+GT  A A+VPL  LG  GWK+ASAL ARHIGGA+N+VAV +TL +    V A +AADN+VV+LYF FLF++      T+     E+ A+ S+ T++ +A                               PL +T  SI+Y+L TA+C + + G L S +     +S++ + +L TVA ATA PSW   L   G  +G+L +QLFFA +GA GSL +V+  APSL+ FSV+ Q+A+HF VL+G+GR + RL   EL LASNANVGGPTTAAAMA AK W  LVLPALL GVLGY TAT   + +G   ++
Sbjct:   94 RDAGSLLMAFLVGAVSTVVGTLGALALVPLKSLGDQGWKVASALTARHIGGAINFVAVADTLSLDGGIVSAAIAADNVVVALYFAFLFYLATVGEGTRDNLNNESKANVSS-TISDNA--------------------LSEEIVIPDEKPLPITTSSIAYSLATASCLVTVGGWLTSAIC--PTLSSMVITSLLTVASATAFPSWFQSLRSSGTAIGILFLQLFFAASGAAGSLVLVLRQAPSLIAFSVL-QLAIHFAVLMGLGRGVLRLKLNELYLASNANVGGPTTAAAMAQAKEWPTLVLPALLVGVLGYGTATAASLSLGPLLIQ 398          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: B7FUA6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUA6_PHATC)

HSP 1 Score: 229 bits (583), Expect = 4.350e-69
Identity = 147/322 (45.65%), Postives = 199/322 (61.80%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLK 960
            R  GTLL  F +GA  TV+GT V+  ++P+  LG DGW++A ALAARHIGGA+N+VAV ETL +S   V A +AADN+VV+LYF FLF I+  ++ +    S+ +GT  A                                   +++  S+  AL+ A  L   G +L+        SA+PL ++ TVA AT  P +   +   G+ LG+L +Q+FFA +GA GS+++VM  APSL  FS + QI VHFGVL+ VGR +FR+P +EL LASNANVGGPTTAAAMA AK WK+LVLPALL G+LGYA+AT I + +G   ++
Sbjct:   65 RDTGTLLLAFGVGAIATVVGTLVSFPILPMTSLGDDGWRVACALAARHIGGAINFVAVAETLQISGTVVSAAIAADNVVVALYFAFLFAISNADQVD--GPSSDSGTSDALELDASGSEVEYSED--------------------SISLSSLGIALSVASGLVTTGRILTNSVLPLGTSALPLTSVLTVAAATIFPKFFVNIRAAGSALGILCIQMFFAASGAAGSISLVMQKAPSLFAFSAL-QIGVHFGVLMSVGRGIFRIPSKELYLASNANVGGPTTAAAMAKAKDWKSLVLPALLVGILGYASATAIALALGPILVR 363          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: W7TV24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TV24_9STRA)

HSP 1 Score: 231 bits (590), Expect = 9.330e-69
Identity = 150/325 (46.15%), Postives = 196/325 (60.31%), Query Frame = 1
Query:   10 GTLLACFVIGAAGTVIGTAVAAAVVPLG----LGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLKALV 969
            G LL  FV+G+ GTV+GT +AA  VPLG     G +GW IA+ALA+RHIGGAVN+VAV ETLG+SA+   AG+AADN+VVS YF  LFW+ +  + E+    A+ G                                    P L   K     AL+ A  LC+ G  +S+    G +S+IP+++L +VA AT  P     +      L V+LM LFF+VTGAQG L+ V+ TAP L + S V Q+  H   L+G GR L RLP +EL +ASNANVGGPTTAAAMA +K WK+LVLP +LTG+LGYA+ATFIG+ +G + L  +V
Sbjct:  183 GRLLRSFVLGSIGTVLGTLIAAWFVPLGSLGAAGKEGWMIAAALASRHIGGAVNFVAVSETLGMSAELTAAGIAADNLVVSFYFGLLFWLARDLEPEDEVLHANGG--------------GGGGPKGTREPVEQATWSATEPPSLGYLK-----ALSLASLLCMVGTWVSEGLLQGAISSIPVISLLSVATATLFPRACSSVTEPAGHLAVILMNLFFSVTGAQGKLSQVLVTAPRLFLLSAV-QLVFHLTFLLGAGRGLLRLPLKELLVASNANVGGPTTAAAMAGSKRWKSLVLPGILTGILGYASATFIGLALGRSVLAKIV 487          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A7S0TFM1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TFM1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 9.430e-67
Identity = 140/317 (44.16%), Postives = 195/317 (61.51%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPL-GLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIG 945
            R AG+LL  F++GA  T+IGT    +++PL  LG DGWK+A AL +RHIGGA+N+VAV +TL +    V A +AADN+VV+LYF  LF++ K  + E          +++S+K                              P  +T  SI+Y++ +A  L   GELL++ A    +S++ + ++ TV  AT  P W  +L   G+ +G+L +Q+FFA +GA GSL +V+  APSL+ FS++ QIA+HF  L+G+GR +FRL   EL LASNANVGGPTTAAAMA AK W  L LPALL GV GYATAT + + +G
Sbjct:   85 RDAGSLLIAFIVGAVSTIIGTIATFSLIPLTSLGEDGWKVACALNSRHIGGAINFVAVADTLNIDGSVVSAAIAADNVVVALYFALLFYLAKAGESETGV------KISSSSKEETLNLPSLGDDIVVENGET----------PNQITTSSIAYSIASASCLVTIGELLTR-AICPSLSSMVITSIVTVLAATIQPKWFRKLRSSGSAIGILFLQMFFAASGASGSLLLVLRRAPSLVAFSMM-QIAIHFVFLIGIGRGIFRLDPNELYLASNANVGGPTTAAAMAQAKEWNRLTLPALLVGVFGYATATALSLSLG 383          
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Match: A0A448ZN12_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZN12_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.810e-66
Identity = 150/323 (46.44%), Postives = 188/323 (58.20%), Query Frame = 1
Query:    1 RFAGTLLACFVIGAAGTVIGTAVAAAVVPL-GLGGD-GWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAASASAGTVAASAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLAVTKESISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGRLGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFLK 960
            R  GTLLA F +GA  TV+ T VA  VVPL  LG D GW++A ALAARHIGGA+N+VAV ETLG+  DAV A +AADN+VV+LYF FLF I K  ++ E A  A +G   A+                                P  +T                    L++       S++PL++  TV  AT+ P++   L   G  LGV+ +Q+FFA +GA GS+ +V   AP+L  FS + QI VHF  LV VGR +FRLP REL LASNANVGGPTTAAAMA AK WK LVLPALL G+LGYATAT + + +G   L+
Sbjct:  194 RDTGTLLAAFCVGAFSTVLATLVAFPVVPLRSLGPDAGWRVACALAARHIGGAINFVAVAETLGIGGDAVAAAIAADNVVVALYFAFLFSIAKAGEEGETADPADSGGEGAAISELAVEDETA---------------------PSTITLXXXXXXXXXXXXXXXXXXFLTRALLPAGTSSLPLISALTVVAATSFPAFFSALSETGTALGVIFVQMFFACSGAAGSIKMVFEKAPALFAFSAL-QIGVHFATLVAVGRGIFRLPSRELYLASNANVGGPTTAAAMAQAKEWKKLVLPALLIGILGYATATALALSLGPILLR 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10153.176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIU9_ECTSI1.860e-15687.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L155_9PHAE1.650e-14183.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YW30_9STRA1.170e-9854.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XZE0_HETAK1.580e-7548.89Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A1E7EVM0_9STRA2.840e-7045.94DUF819-domain-containing protein (Fragment) n=1 Ta... [more]
B8C2C6_THAPS3.670e-6946.81Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B7FUA6_PHATC4.350e-6945.65Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
W7TV24_9STRA9.330e-6946.15Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0TFM1_9STRA9.430e-6744.16Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A448ZN12_9STRA1.810e-6646.44Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10153contigH-canaliculatus_F_contig10153:71..4856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score457.2
Seed ortholog evalue6.4e-126
Seed eggNOG ortholog2880.D8LIU9
EggNOG free text desc.Protein of unknown function (DUF819)
EggNOG OGs2QQM4@2759,COG5505@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionProtein of unknown function DUF819
Ec32 orthologEc-20_001620.1
Exons7
Model size981
Cds size981
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928644.5131445-CDS-H-canaliculatus_F_contig10153:70..1751622928644.5131445-CDS-H-canaliculatus_F_contig10153:70..175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 71..175 -
1696845510.4175243-CDS-H-canaliculatus_F_contig10153:70..1751696845510.4175243-CDS-H-canaliculatus_F_contig10153:70..175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 71..175 -
1622928644.5255191-CDS-H-canaliculatus_F_contig10153:980..11271622928644.5255191-CDS-H-canaliculatus_F_contig10153:980..1127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 981..1127 -
1696845510.43438-CDS-H-canaliculatus_F_contig10153:980..11271696845510.43438-CDS-H-canaliculatus_F_contig10153:980..1127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 981..1127 -
1622928644.539864-CDS-H-canaliculatus_F_contig10153:2320..24281622928644.539864-CDS-H-canaliculatus_F_contig10153:2320..2428Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 2321..2428 -
1696845510.4442768-CDS-H-canaliculatus_F_contig10153:2320..24281696845510.4442768-CDS-H-canaliculatus_F_contig10153:2320..2428Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 2321..2428 -
1622928644.5520372-CDS-H-canaliculatus_F_contig10153:2751..28331622928644.5520372-CDS-H-canaliculatus_F_contig10153:2751..2833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 2752..2833 -
1696845510.4522846-CDS-H-canaliculatus_F_contig10153:2751..28331696845510.4522846-CDS-H-canaliculatus_F_contig10153:2751..2833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 2752..2833 -
1622928644.5615768-CDS-H-canaliculatus_F_contig10153:3670..39781622928644.5615768-CDS-H-canaliculatus_F_contig10153:3670..3978Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 3671..3978 -
1696845510.4603803-CDS-H-canaliculatus_F_contig10153:3670..39781696845510.4603803-CDS-H-canaliculatus_F_contig10153:3670..3978Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 3671..3978 -
1622928644.5708675-CDS-H-canaliculatus_F_contig10153:4422..44851622928644.5708675-CDS-H-canaliculatus_F_contig10153:4422..4485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 4423..4485 -
1696845510.468323-CDS-H-canaliculatus_F_contig10153:4422..44851696845510.468323-CDS-H-canaliculatus_F_contig10153:4422..4485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 4423..4485 -
1622928644.5801885-CDS-H-canaliculatus_F_contig10153:4688..48561622928644.5801885-CDS-H-canaliculatus_F_contig10153:4688..4856Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 4689..4856 -
1696845510.4841654-CDS-H-canaliculatus_F_contig10153:4688..48561696845510.4841654-CDS-H-canaliculatus_F_contig10153:4688..4856Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10153 4689..4856 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10153.176.1prot_H-canaliculatus_F_contig10153.176.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10153 71..4856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10153.176.1

>prot_H-canaliculatus_F_contig10153.176.1 ID=prot_H-canaliculatus_F_contig10153.176.1|Name=mRNA_H-canaliculatus_F_contig10153.176.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=327bp
RFAGTLLACFVIGAAGTVIGTAVAAAVVPLGLGGDGWKIASALAARHIGG
AVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKKEEAAA
SASAGTVAASAKASPQQGAMASAAETTPEAAAEAAAASVAPPPLAVTKES
ISYALTAACALCLCGELLSKLAFGGRVSAIPLVTLATVAGATAAPSWVGR
LGPVGAQLGVLLMQLFFAVTGAQGSLAVVMGTAPSLLVFSVVQQIAVHFG
VLVGVGRLFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTG
VLGYATATFIGVGIGHAFLKALVGLT*
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mRNA from alignment at H-canaliculatus_F_contig10153:71..4856-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10153.176.1 ID=mRNA_H-canaliculatus_F_contig10153.176.1|Name=mRNA_H-canaliculatus_F_contig10153.176.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4786bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10153:71..4856- (Hapterophycus canaliculatus Oshoro5f female)
AGGTTTGCCGGAACCTTGCTGGCGTGTTTCGTTATCGGGGCTGCGGGGAC GGTTATCGGGACGGCGGTCGCGGCGGCGGTGGTGCCCCTGGGGCTAGGCG GTGACGGCTGGAAGATCGCCTCGGCGCTTGCGGCAAGGCACATCGGTGGT GCCGTCAACTATGTCGCGGTGGGTATCGACGTTACTCTTCTGGGTCTTCT TGCTGCTGTTCTTTCAGACACGCTGGCGGTAGCGGCGGCGAAACCAGCTC CGGCAATCCAAATCTGCCGCAACCTACCGTCCCTCATCGTATATCTCAGA GTGTGCCCGAACCGAGCTTGTCTCAGCTGGCGCCGGACCCCCCCCCCCCT TGCCTTCTTCTTTCTAACTAGGTGTGCGAAACCCTGGGGGTTTCGGCGGA TGCCGTCGTGGCCGGGCTGGCCGCCGACAATATGGTGAGGCCGTCGCTTT TCGGACGAACACTGATCGACACCCCGTGATCCTCTTTCGTCACACTTTTC CAGCAACGAGATTTGGTGCGGTTTGTCCTCCTCGTCGGCTCTTATGGGTG TCGACCATGGACCAGCCCGGGGCTCATCAACCGACTGCATGTGCCTCGAA TGCTTCGCCGGCGGTGGCGTCTAGAACAGCACCTCGTTGTTGCGTATGTC GTCCTCCAATTTTGAACGCACATGTGGGCATGTGCAGATACAGAAAGCGT GAAAATTGGAACCTGTTTCGCGATGATTTGCGGTCTGCTCGGTAGTTTTG AGTGCGGGTGCGGGCATGTGTGGATGCAGAAAGCGTGAACTTGCGGTGTC TGCTTCTGCTGAGCTCGTGTGCGTCTTGAGCGACTGATGTGCTTCTGCGC TCTTTTTCGTTTGTCGCCGGCGCAACAGGTAGTCTCGCTGTACTTCATCT TCCTGTTCTGGATTACGAAGCCGGAGAAGAAAGAAGAGGCCGCAGCTTCG GCGTCGGCGGGGACAGTCGCAGCAAGCGCCAAAGCGTCACCACAACAAGG GGCGATGGCATCGGCAGCGGAGACAACGCCAGAAGCAGCAGCAGAAGCAG CTGCGGCGTCAGTGGCCCCACCTCCACTGGCTGTGACCAAGGAATCGATT TCGTACGCCCTGACGGCGGCGTGCGCGCTCTGCCTGTGCGGGGAGCTGCT CTCCAAGTTGGCCTTCGGTGGCAGGGTCAGCGCCATGTGAGCTTCGGTTT CGGTTGCGGGGTTGTTCGTGTGCTTTCTCCTCTCTATAGGAAGACCACCG TATTCCCTCGAGCTAGATCACGGTCGCTCTCTCTCAGCTTGTCGGTGTGG CGTAACGGCAAAAATTCTCATAGATCTCTTGAGCCGATGGCCGAGGGTCT TGAGAATTGACAAGGTCTACAGGTTCGCTGTCGAATGTTCATCCGTTTTT CGCAGGGGGCCGGCCGAAGTTTGTTGGCAGGCTCGACCTTTTCCACGCGA GATCCAAGCTTTCGAAGCGAGGTACTGTACTCGTTCTTAAAAAAAACATC GTGTCACGATACAGCAAGTCCATGCAGTCGCTGCTTCTATCGCACCCCCC CAATTTTATTTTCAGTTCTCTCGAACTTTTGGAGAATCAAGAACACAACG AACTCGAAAAGCAAGAGGTGATGGAGGGGTGAGGTCGCGATCGATCGACC GCCCAAAAGGTGGTTTGTGCTTGCCTCTTCGCGACCTGGTCGCCGCCAAA GTCTTTAGATTTAGAAAAAGAAGGATAAAATCTCTCCCTCGCCAGATCGC CGAAATGTGGCGGTGGCCCCCCTTCCGTCGAGGACGGACGCCCGGTGTAA CCCTGTAATACTTACACGTCCAACAAGGAGACAAAACAACGCACACAGTT TCCCCTTTGCTCTGGCCCCTTGGGTAGCGATCGCCACCTACTTCTGTGGA AATCTCCACGGTTCACGGGCATACAACCTATCATCGCGCCGCCCAACACT ATTCTTCTTGTCGACGTTTCCGCCCCGATGTACTCGTCCTTGCACACGGC GGTGAATCAACCACCATCAATAGCCCCTTGGTCACGCTCGCCACGGTAGC GGGAGCGACCGCAGCCCCTTCGTGGGTGGGAAGACTGGGTCCGGTCGGCG CGCAGGTGTGTGCACACCGCCGTCCAAAGCTTGAGCTCCTTGAGACGTAG CCACGTTCGTCGCTCCTACCCTTGGCCGCAGCCCCAGCCGCCGCAGCCCC AGCCGCCGCGGATGTTGATGCCCTCGTTCACGTTGCGTTGGCTTGTGGTG CCGCCTGATCGGTGTCGACATTGCCCCGTCAGCCGCTCTCGTCTCTGACT TTGACCCTGTCCATGCGCCTCCATCTCGCTGCATCTCTCTTCCTTCGTCC ACCACCCCGTCGTCGCTGGTGCGTACCGTACGCCACCACGAAAACAACAC TGACGACGACGACGACGACCAACGACAGCTCGGCGTGCTGCTGATGCAGC TCTTCTTCGCCGTGACGGGGGCGCAGGGCAGCTTAGCCGTGGTGATGGGA ACGGCCCCCTCGCTCCTAGTGTTCTCCGTCGTGCAGGTGTGGTCCGCGCC AGGCGCACCGACTTTCGGCGGGGGCGTCTTTGTAGGATGCGTCTGCTGGG TGCGTGCGGGCTCCCTCTGCGCTTTTAATGCCATGTAGTGTGCGAGTGAG ATTACATGCGTATCGCATACCATGCTACTTCCCGTTGTAGCGATGGACTG GAACGTTCTCCGTTTCCCGCGCGACGCTTGCGTGAGCTTCGTGTCTCGGG CGCCTGGGCTTGAGGTAAGCAATGTGTCGTCGTGTCGTACGGCGAGGATT CGGTCTCGCAGGTGGTATCGTGTGCGTGTGTCTTTGTGCATGCTTGTATG TGTGTGTGTGTGTGTGTAGGACGTGCCCTATTTTTCGGCTCGTTCTTGGC TGCTCACTCTCTGTGCGCATTGTAGGAGTCATTTTTACCTCGAGCCCGCG CTTGCGGCGAGAATTCTCGCTCTCCTCTTGAAAACATCCACATCCGAGCA CTCGCTTCTCTCGTTTTCGTATACGAGCACCATCAGCCGCTCCAACCGCG ACCAAGCACAACCTTCTAGACCCGACTTCCGATCAAGAAAAAAACATAGC CGTGGCAAAGCATTCCGCATTCGTGTCGCAAAGCTCGCCCTCCAGTTTGC CGTCCATGCAAGAGAACCAGCACTGCGTCGTGCACAAGGCGCACGCAGGA GTAAAACGCGCCACGTTTTCTCCCACGCACGCACCTTTGCACCGGCCTCC ACGAGTAGTTCTCGCCTGCTCAACCACCGCCATTCTCTCTGTCTCTCTCT CTCTGTCTCTGTCTCTGTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCGTCCGGGCCAGCCGGCTGAACCCGACCCACCCTCCTGAACCCGTC CCGAACAAAACACCCCGGCAATGAAGTATCAAAATGCGCCTTATGCATGT ATCGCCCGCGATCCGTCTCTCCTGACACGCATAAAATGTCTCATCCTTCA CCATAAATCTTTTCCGACCGTGCTCAACCCTCACCGTAAAGAATTCAACA TAATGCCCCCGGGTCGCTGTCATTTGTCTCAGCGGAGGTTATCCCCTTGG TGTTTTTGATTCTTCCTTTTGCAACACCACGGCGCAACCCACGGCGACGA TTATGGCCCCACTCCGCACCATGAAACACCCCCCCCCACTCCTCGAATAT ATTGAACCCCCCCTCGACAAAAAAACGAGCAGATCGCGGTTCACTTCGGT GTTCTGGTGGGCGTGGGCAGACTGTTCCGGCTCCCTTTCAGAGAGCTGGC TCTGGCCTCCAACGCCAACGTGGGAGGGCCCACCACGGCGGCGGCGATGG CCGCTGCCAAAGGCTGGAAAAACCTCGTGAGTGGGACCAGCAGTGTATGC GGTGTCGAGGGAGACTGCTCTACACGGTAGAAAGCTGCAGTGGCTGTCGT GAGAAGTCGGAACTCGTGTTTTCGCGAGCTTGGTTGGTCGTTGTTGCGGA GAAACGATGGTGCTGAGAGGGCATCGCTGGTGCTGGTACAGCGCAACGCT TCTCGTCGTAACGCCCATGTTGGTGCTAGAAATGCGATGCTTGCCACTCG GAAGGCAACGCTTACCGTCACGATGCCGTGGTTGCCGACTTTACGAAATG CGGATAGCATTACCAAGAGTTGGTGTGTGCCTGCCGGTGTCTCGAACCAA TGGTGTCTGGTTTTGGAGTAGACATGTCGAGAGAGTGTTCCCCTGGGCTT TATTTTGTTTCTTAGATAGGAGCTTGATGTCAGGGCTGTGCCTCTTTCGA TCGAGGGACGCTGCTGTACTTGTATCGGCCGTTCCGAATGCAAACCGTGT GCATCCGCTTCCTCTTTTGCGGCATCATGTGCTTGGTCCAAAACACCCCT GGCGGAAATCGAGTCTCGTTCATTTCGATTCCGGCAGCAGGAAAAAAATT CTTCGCCTCCCCCGCCGCGAGGGACTTAACCCACTCCTCGAAGTCCTCTT TATGACCAGGCTTTCACATCTCGGGATTTTGTATCTGGTTGCGAGATAGA TTCGACCTGATGATCAGCTCGTTGCCGAAGTACGTACCGAGGCTTCCATC TGACCGTCACTGTTTCGTCTCGTTTCGTGCATGCGATTCCGTCATGTGGC ATGTTGCGCTTCCGTTCGTCTTCGGGCACAGGTTCTTCCTGCCCTGCTGA CGGGCGTGCTCGGCTACGCGACGGCGACGTTCATCGGCGTGGGTATTGGG CACGCCTTCCTCAAGGCCCTCGTCGGGCTGACGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10153:71..4856-

>mRNA_H-canaliculatus_F_contig10153.176.1 ID=mRNA_H-canaliculatus_F_contig10153.176.1|Name=mRNA_H-canaliculatus_F_contig10153.176.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1962bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10153:71..4856- (Hapterophycus canaliculatus Oshoro5f female)
AGGTTTGCCGGAACCTTGCTGGCGTGTTTCGTTATCGGGGCTGCGGGGAC
GGTTATCGGGACGGCGGTCGCGGCGGCGGTGGTGCCCCTGGGGCTAGGCG
GTGACGGCTGGAAGATCGCCTCGGCGCTTGCGGCAAGGCACATCGGTGGT
GCCGTCAACTATGTCGCGAGGTTTGCCGGAACCTTGCTGGCGTGTTTCGT
TATCGGGGCTGCGGGGACGGTTATCGGGACGGCGGTCGCGGCGGCGGTGG
TGCCCCTGGGGCTAGGCGGTGACGGCTGGAAGATCGCCTCGGCGCTTGCG
GCAAGGCACATCGGTGGTGCCGTCAACTATGTCGCGGTGTGCGAAACCCT
GGGGGTTTCGGCGGATGCCGTCGTGGCCGGGCTGGCCGCCGACAATATGG
TGTGCGAAACCCTGGGGGTTTCGGCGGATGCCGTCGTGGCCGGGCTGGCC
GCCGACAATATGGTAGTCTCGCTGTACTTCATCTTCCTGTTCTGGATTAC
GAAGCCGGAGAAGAAAGAAGAGGCCGCAGCTTCGGCGTCGGCGGGGACAG
TCGCAGCAAGCGCCAAAGCGTCACCACAACAAGGGGCGATGGCATCGGCA
GCGGAGACAACGCCAGAAGCAGCAGCAGAAGCAGCTGCGGCGTCAGTGGC
CCCACCTCCACTGGCTGTGACCAAGGAATCGATTTCGTACGCCCTGACGG
CGGCGTGCGCGCTCTGCCTGTGCGGGGAGCTGCTCTCCAAGTTGGCCTTC
GGTGGCAGGGTCAGCGCCATGTAGTCTCGCTGTACTTCATCTTCCTGTTC
TGGATTACGAAGCCGGAGAAGAAAGAAGAGGCCGCAGCTTCGGCGTCGGC
GGGGACAGTCGCAGCAAGCGCCAAAGCGTCACCACAACAAGGGGCGATGG
CATCGGCAGCGGAGACAACGCCAGAAGCAGCAGCAGAAGCAGCTGCGGCG
TCAGTGGCCCCACCTCCACTGGCTGTGACCAAGGAATCGATTTCGTACGC
CCTGACGGCGGCGTGCGCGCTCTGCCTGTGCGGGGAGCTGCTCTCCAAGT
TGGCCTTCGGTGGCAGGGTCAGCGCCATCCCCTTGGTCACGCTCGCCACG
GTAGCGGGAGCGACCGCAGCCCCTTCGTGGGTGGGAAGACTGGGTCCGGT
CGGCGCGCAGCCCCTTGGTCACGCTCGCCACGGTAGCGGGAGCGACCGCA
GCCCCTTCGTGGGTGGGAAGACTGGGTCCGGTCGGCGCGCAGCTCGGCGT
GCTGCTGATGCAGCTCTTCTTCGCCGTGACGGGGGCGCAGGGCAGCTTAG
CCGTGGTGATGGGAACGGCCCCCTCGCTCCTAGTGTTCTCCGTCGTGCAG
CTCGGCGTGCTGCTGATGCAGCTCTTCTTCGCCGTGACGGGGGCGCAGGG
CAGCTTAGCCGTGGTGATGGGAACGGCCCCCTCGCTCCTAGTGTTCTCCG
TCGTGCAGCAGATCGCGGTTCACTTCGGTGTTCTGGTGGGCGTGGGCAGA
CTGTTCCGGCTCCCTTTCAGAGAGCTGGCTCTGGCCTCCAACGCCAACGT
GGGAGGGCCCACCACGGCGGCGGCGATGGCCGCTGCCAAAGGCTGGAAAA
ACCTCCAGATCGCGGTTCACTTCGGTGTTCTGGTGGGCGTGGGCAGACTG
TTCCGGCTCCCTTTCAGAGAGCTGGCTCTGGCCTCCAACGCCAACGTGGG
AGGGCCCACCACGGCGGCGGCGATGGCCGCTGCCAAAGGCTGGAAAAACC
TCGTTCTTCCTGCCCTGCTGACGGGCGTGCTCGGCTACGCGACGGCGACG
TTCATCGGCGTGGGTATTGGGCACGCCTTCCTCAAGGCCCTCGTCGGGCT
GACGTAGGTTCTTCCTGCCCTGCTGACGGGCGTGCTCGGCTACGCGACGG
CGACGTTCATCGGCGTGGGTATTGGGCACGCCTTCCTCAAGGCCCTCGTC
GGGCTGACGTAG
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