mRNA_H-canaliculatus_F_contig10152.175.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: D8LNU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNU1_ECTSI) HSP 1 Score: 358 bits (918), Expect = 6.760e-115 Identity = 220/436 (50.46%), Postives = 259/436 (59.40%), Query Frame = 3 Query: 177 GCYCTKLVGHVGLRRQASSAAQRLSEARTQQRENESWAKQSGAREVLAQPPFGVECVEERASAATPGMLDSVEIYLKARRWHHPEGPARRFLSHLLTYPLTLAAGLHGAGLGSGPAAAVSTASTKLEPGAPLGVAGNRKEPDRDWTSSGGGDNSNSTXXXNSSRRLTVVCLGARAESSMPPAFWRETLFALPEVSHLTLHLIGPELSLPSGLAAGRRRQQXXXXXXXXXXXXXXXXXXXXXXXAVSVGARTADISWTRAMLGRAASGCVEGGEER--VAAGSGVXXXXXXXXXXXXXXXXXXXXXXADETVRKADAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCNWGVMIVKG 1478 GC C+ V +A S + L EAR Q EN++WAK GAR+VL QPPF E + A+ A+ ML+S+E YL+ARRW + E PARRFLSHLLTYPLTLAAGL A + K +P ++T+S G N +L VVCLGARAES+MPPA+WRE LFALP+VS L+LHLIGPEL LP G+ A R +SVGARTADI+WTRAM+G +A GCV G E++ AAGS V A+E V ADAFVLFNPGLGHPHL++GWDGALKRLLATGKPIVVSCHS KDLDRD RLLREAGA C P A EG G G G G +ENPFRSLM SEDPLS PG E++V CNWG+M+V+G Sbjct: 13 GCCCSSAARSVVSSMRAYSTLE-LPEARKQGEENKAWAKTPGARQVLDQPPFEGEDGDIGAARASACMLESLEGYLQARRWPYREEPARRFLSHLLTYPLTLAAGLREARI-------------KQQP---------------EYTNSDGRRN-----------KLAVVCLGARAESTMPPAYWREALFALPDVSRLSLHLIGPELGLPPGVVAAAR--------PGTAACDGAGTIGPISTAVISVGARTADIAWTRAMVGSSAGGCVTGAEQKPEAAAGSAVGSGRGAATEPGGAGAVEA----AEEAVEAADAFVLFNPGLGHPHLRQGWDGALKRLLATGKPIVVSCHSPKDLDRDTRLLREAGAEPCCPPSAANASAGEGNGNRGNGLGA------KENPFRSLMASEDPLSVPGDEDLVWCNWGMMVVRG 390
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A7S2S4T4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4T4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.220e-14 Identity = 62/190 (32.63%), Postives = 84/190 (44.21%), Query Frame = 3 Query: 252 EARTQQRENESWAKQSGAREVLAQPPFGVECVEERASAATPGMLDSVEI-----YLKARRWHHPEGPA----RRFLSHLLTYPLTLAAGLHGAGLGSGPAAAVSTASTKLEPGAPLGVAGNRKEPDRDWTSSGGGDNSNSTXXXNSSRRLTVVCLGARAESSMPPAFWRETLFALPEVSHLTLHLIGPEL 794 E+R Q E+ +WAK RE L PP A+ ATP + D ++ YL+ R W P+ A RR LSH+L+YPL+LA G+H GL SG RL V+C GAR E+ +PP +W E L A P +SH+TLH +GP++ Sbjct: 48 ESRRQLLEDTAWAKSPAGREALRPPP-------PXATPATPRLADLIQAGDLDGYLRYRGWP-PDAVASPAGRRVLSHVLSYPLSLARGIHKLGLASG-----------------------------------------------DEGRLRVLCAGARGEAGLPPQWWMELLHACPALSHVTLHFVGPQV 182
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: K3WH95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH95_GLOUD) HSP 1 Score: 73.9 bits (180), Expect = 1.070e-11 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 1113 DAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPL 1418 DAFVLFNPG+GHP LK+ W ++ LLA+ KPI++S S DLDRD +LRE + + GD + +P+ NPFR+L DPL Sbjct: 70 DAFVLFNPGIGHPFLKQRWQPTMEALLASRKPILLSSFSKVDLDRDVAVLREL---------------CQSQKGDLKF-----LASPQSNPFRNLKYQIDPL 151
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: K8YPB9_NANGC (Mrna processing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YPB9_NANGC) HSP 1 Score: 77.0 bits (188), Expect = 1.550e-11 Identity = 107/421 (25.42%), Postives = 160/421 (38.00%), Query Frame = 3 Query: 228 SSAAQRLSEARTQQRENESW-AKQSGAREVLAQPPFGVECVEERASAATPGMLDSVEIYLKARRWHHPE------GPARRFLSHLLTYPLTLA---AGLHGAGLGSGPAAAVSTASTKLEPGAPLGVAGNRKEPDRDWTSSGGGDNSNSTXXXNSSRRLTVVCLGARAESSMPPAFWRETLFALPEVSHLTLHLIGPELSLPSGLAAGRR--RQQXXXXXXXXXXXXXXXXXXXXXXXAVSVGARTADISWTRAMLGRAASGCVEGGEERVAAGSGVXXXXXXXXXXXXXXXXXXXXXXADETVRKADAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCN 1454 +S A + A + RE W +K + +R + P E S+ +P ++E Y++ R+W P R LSHLL+YPLTLA LHG+ T+S K G+P V V +GARAE+++P A+W+E L P + LH++GPE+ P+ AGR R + + ++ + + + G AA+ A S +D + A VLFNPGLGHP L + W L+ L A PI+ + HS +D DRD L +G G+ + + VE V P NPF S + DPL+ A+ V++ N Sbjct: 3 TSTAPTAAMAAREAREEALWLSKPTNSRLIQPPAPSAFHAAGEGPSSTSPP--PTLEEYVRRRQWAGKNTETLLASPGLRVLSHLLSYPLTLAHYLPSLHGS----------DTSSAKA--GSPGEVC-------------------------------HVAIIGARAEATLPDAWWQEVLCLQPGL--FCLHMVGPEVYDPA-TRAGRESVRLDPQRQLWMHRRQGMYHVLAPDLVSSFRLSPSSSPPASSASSPGVAATPAPTASSLDPVAPS----------------------QASDASPAAVSAAVLFNPGLGHPALAKAWKPTLQCLQAAKVPILWTAHSAEDRDRDVAWL--SGGAEDKESGFGD-LRVEWL------------VAPGPNPFASRKLVVDPLN---AQHVLAAN 335
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A7S2L7N8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L7N8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.070e-10 Identity = 44/109 (40.37%), Postives = 54/109 (49.54%), Query Frame = 3 Query: 1095 ETVRKADAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREA-GAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPL 1418 +T AFVLFNPGLGHPHLK GW A+ ++ T P+ ++ HS D DRD +LRE+ V P V V G G R PF S M + DPL Sbjct: 12 DTTSNDVAFVLFNPGLGHPHLKSGWRDAMDSIVQTRLPLFLTAHSELDQDRDWNMLRESFERVGRPMP--LHVVHVHGDDGY------------RLCPFASRMSTPDPL 106
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A4D9CVF1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.740e-10 Identity = 124/422 (29.38%), Postives = 176/422 (41.71%), Query Frame = 3 Query: 228 SSAAQRLSEARTQQRENESW-AKQSGAREVLAQPPFGVECVEERASAATPGMLDSVEIYLKARRWHHPE------GPARRFLSHLLTYPLTLA---AGLHGAGLGSGPAAAVSTASTKLEPGAPLGVAGNRKEPDRDWTSSGGGDNSNSTXXXNSSRRLTVVCLGARAESSMPPAFWRETLFALPEVSHLTLHLIGPELSLPS---GLAAGRRRQQXXXXXXXXXXXXXXXXXXXXXXXAVSVGARTADISWTRAMLGRAASGCVEGGEERVAAGSGVXXXXXXXXXXXXXXXXXXXXXXADETVRKADAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCN 1454 +S A + A + R+ W +K + +R + P E S+ +P ++E Y++ R+W P R LSHLL+YPLTLA L+G+ TAS K+ G+P GV+ V +GARAE+++P A+W+E L P + LH++GPE+ P+ G + R Q +S +S A+ GV XXXXXXXXXXXXXXXXXXX+ + A VLFNPGLGHP L E W L+ L A P++ + HS +D DRD L +G + G + + VE V P NPF S + DPL+ A+ V++ N Sbjct: 816 TSTAPTAAMAAREARDEALWLSKPTNSRLIQPPAPSAFHDAGEGPSSTSPP--PTLEEYVRRRQWAGKSTETLLASPGLRVLSHLLSYPLTLAHYLPSLYGS----------DTASAKV--GSPGGVS-------------------------------HVAIIGARAEATLPDAWWQEVLCMQPGL--FCLHMVGPEVYDPATRAGRESVRLDPQRQLWMHRRQGLYHVLAPDLVSSFRLSPSPSPPALS---------------------ASSPGVAATXXXXXXXXXXXXXXXXXXXSPAALSAA---VLFNPGLGHPALAEAWKPTLQCLQAAKVPVLWTAHSAEDRDRDVACL--SGGAEDNESGCGD-MRVEWL------------VAPGPNPFASRKLVVDPLN---AQHVLAAN 1148
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A7S3ZJA7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJA7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.320e-10 Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 3 Query: 1107 KADAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREA-GAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCNWGVMIVKG 1478 +ADA VLFNPG+GHP+L EGW AL+ + A+G+P++V+ HS D RD L GA+ P P +NPFRS +V DP A + S N +V+G Sbjct: 176 EADAVVLFNPGVGHPNLAEGWVPALEAIRASGRPLLVTGHSEMDSRRDLTALEARYGALRFAAP-------------------------PCQNPFRSRVVIVDPAD---ATHMTSANAWAFVVEG 272
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A2P4XZM3_9STRA (Mss51 like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZM3_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.010e-10 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 1113 DAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCNWGVMIVK 1475 DAFVL+NPG+GHPHL+E W+ L+ +LA+GKP++++ S +D RD L+E A S ++ E+ R ++N FRSL DP + + + N VM+V+ Sbjct: 267 DAFVLYNPGVGHPHLRESWEPTLQAVLASGKPVLITSFSLEDQQRDITALQELVANSPVL----KQHELRFR------------CRAKQNSFRSLKYQLDPSN---VDTPIQTNNRVMVVQ 368
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: A0A1W0A663_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A663_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.610e-9 Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 3 Query: 1113 DAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCNWGVMIVK 1475 DA VLFNPGLGHPHLK W +L L T KP++++C S KDL RD L A AE ++ G + + T NPF+S + DPL P + + N M+V+ Sbjct: 582 DAIVLFNPGLGHPHLKNLWAPSLNLALTTYKPLLITCFSAKDLHRDLEALDNA----------AESLD----------GTLNFTKTAGINPFQSRKIIVDPLDP---QNPIQTNQYSMVVR 679
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Match: G4ZL84_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZL84_PHYSP) HSP 1 Score: 70.5 bits (171), Expect = 2.740e-9 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 1113 DAFVLFNPGLGHPHLKEGWDGALKRLLATGKPIVVSCHSWKDLDRDARLLREAGAVSCHYPGWAEEVEVEGRGGDGRGGGESDSVTPRENPFRSLMVSEDPLSPPGAEEVVSCNWGVMIVK 1475 DAFVL+NPG+GHPHL+E WD ++ +LA+ KP++++ S +D RD L++ A S + E+ + R ++N FRSL DP + + N VM+V+ Sbjct: 263 DAFVLYNPGIGHPHLRESWDPTIQAVLASCKPVLITSFSLEDQQRDIAALQDLVANSPIFS--KHELRFQCRA--------------KQNSFRSLKYQVDPSN---VGTPIQTNSRVMVVQ 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10152.175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10152.175.1 >prot_H-canaliculatus_F_contig10152.175.1 ID=prot_H-canaliculatus_F_contig10152.175.1|Name=mRNA_H-canaliculatus_F_contig10152.175.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=476bp MRTGRSISRCGCYCTKLVGHVGLRRQASSAAQRLSEARTQQRENESWAKQback to top mRNA from alignment at H-canaliculatus_F_contig10152:1008..3427- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10152.175.1 ID=mRNA_H-canaliculatus_F_contig10152.175.1|Name=mRNA_H-canaliculatus_F_contig10152.175.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2420bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10152:1008..3427- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10152:1008..3427- >mRNA_H-canaliculatus_F_contig10152.175.1 ID=mRNA_H-canaliculatus_F_contig10152.175.1|Name=mRNA_H-canaliculatus_F_contig10152.175.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2856bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10152:1008..3427- (Hapterophycus canaliculatus Oshoro5f female)back to top |