mRNA_H-canaliculatus_F_contig1015.169.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1015.169.1 vs. uniprot
Match: D8LBT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT9_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 5.160e-183 Identity = 523/1214 (43.08%), Postives = 658/1214 (54.20%), Query Frame = 1
Query: 544 ILSSRERSPSTQRYASAWLPPRVTRLERETHDLLTACRKAGRDTGYAARLNDEDCRHGCTPEGQSPGRSGECRRISGQSNSYGGSFRSDEKIEDLGRGAVIRLIGNLGMGRYAHRFRAFAVTGSDLASCTEEDLVQIGVSFRPHRIRLLKEIAIRKDQRHGSGIRGREKSTYNATETWATSE--INTTSTAPDQHDSFNTLVAPGQIDPSAPDQRGNPKAITATSTKDERSASKKPSDAGRTNEATDSTSTSTACTTYERAVPPTVEPTSFAQDCVPTARVEGDKSHGSSGGKYDRGGKETLLMSAKVAGSR--RIVGEDNSSRACGTGQNSSEGTGLTRRQVQMPGSGEFHGQRTVVPFAQAHDKSAK-QGLTTSELKGTLQMCGVRTADMKLALVGRDPFLQVKACDQLRRINVAAGAGAEASWDDAVVSFSVTDQTLPSDGVQIELCCGNIGAQDLFASGCIPGDVTLQLLCRLQSDGLESVRPSADESAGGNSAVSHASGSLAVLVRLFAEAGGEEAGVCTLNLKFKPDNGAVLASEAEDRRS---SEQTEARREPETAAVEEMEV------------EALATAP-EGVEHRRSSSTLLKGTAKHIEAIEEVCQHAYRQQEHSDQSDRGEAQQD---LASRTEIQSSAASI--------TSNREAKAVGGVPPSLEKVENVLAPHDAAVILQSHTRRRAAKRVAKRRVKERTAANRVQAFARQRMDVSKVRQARERELATMHQERCDAVVRLQGTARRRIAAKAVQXXXXXEAELAKRDAEAAQTLQGFARHQLRKRARRRQVAATKMQGISSIRAAKAEVRRRKAEKQLEAKRKSDEEAAALQIQTAVRRQRAAHEQHLVQSRQRNXXXXXXXXXARSRSAQSKACRQRGRQALLKTAARITVQDALKQALENCVARVMEMRRRAASDCLRQALGNQRDVATGATYSTAPVKKDAKTTVASACILHAFDKKQRPTNEAADESYTSLPEAGLSLKGSTKIESDAAVTLATADDAPTEKENSELARLMDEAESFRQLEMAAAAEEQRTAARRIQGLCRKRRARRKTDRRDTLSH-SPPVVSAGCTTRFTQELMDSRKSEEAATHIQRAFRTWCLVRQARGLSARKTTAVICIQQATRSRTAFHRVADLRAKQRDLVQIKLRTEADQAVIRGEAAECIQRGVRTRRALILIDRLRRKK------KMQETGQR 4068
+++SR RS S ASAWLPPRVTRLERETHDLLTACRKAGR G AAR G +G P RSGE +R QS +Y F SDEKIEDLGRGAV+RLIGNLGMGRYAHRFRAFAVTGSDLASCTEEDLVQIGVSFRPHR+RLLKEIA RK R + RGREK + + ++ I T ST+ +HD P A + + +A++ + TK + +A TNE DS+STSTACT YE AVP TV DC T RV G+ + S+ D G+ + SA V S ++ G D+S+ G G S+ G + R Q+ S G ++V F + D SA +G T LKGTLQM GVR MKLA+ DPFLQVKACDQLRR NV G GAEASWDDAV+SFSVTDQ L SDGV IELCCGN+G+QDL ASG IPGDVT++L+CRL+S + R AD + G+SA ++ SLAV VRLFAE GG++AGVCTLNL F+ D G +A+ ED + + Q EA+R+ ET E++ + + A AP +G E R+SS LL+ TA+HIEAIEEVCQ +Q E +D + + E D LAS+T+ + A++I +SNR+ P + E++L KRRVKERTAA RVQAFARQRM QGIS IR AKAEVRRRKA+KQL AKR+ +++ AALQIQ+ XXXXXXXXX SAQS R+R R LLKT AR+ V++ LKQ LE CVA VME + R+A + Q L N + TG +A + A+ +ASA IL+A+D++ ++ D S++ L L+G T E+ AAV+ +D T E S EAES R+ EM A RR R + SH SP VV++GCT+R TQEL SRK EEAAT IQ+AFR WCL RQAR L RKT A I IQ + +++ EA + + RG+AA IQR VR R+A L+ L++++ K++E QR
Sbjct: 2 VVASRARSSSRPLNASAWLPPRVTRLERETHDLLTACRKAGRCKGDAARGYSATSHSGRMADGTPPPRSGERQRNVEQSEAYE-LFWSDEKIEDLGRGAVVRLIGNLGMGRYAHRFRAFAVTGSDLASCTEEDLVQIGVSFRPHRLRLLKEIARRKGTRDSTSSRGREKRRRSTVVDASVTDGVIRTNSTSQQEHDRRPEKAIP------ALELQKPMEAVSTSHTKGKTNALHDVPPTAPTNEVVDSSSTSTACTPYEDAVPSTVGSAPIGPDCTTTPRVAGNNTRPSTANMGD--GEREVSPSALVEMSEPLQLNGRDDSAGVDGDGHPSARGE-IVSRPHQVEDSDMPPGGGSLVDFVRFPDASAAARGGNTPGLKGTLQMSGVRAGGMKLAIGNNDPFLQVKACDQLRRTNVVMGTGAEASWDDAVLSFSVTDQALTSDGVLIELCCGNVGSQDLVASGTIPGDVTMRLICRLRSKSVGRGRACADNNVAGDSASANGGSSLAVEVRLFAEPGGKDAGVCTLNLNFRQDEGEEVANGVEDAQLPGYAMQDEAQRKLETTEEEQIPLAIAAPGVAVTADQTRAGAPTDGAERRQSSLVLLQETARHIEAIEEVCQLVRQQHELADGAGQPEGGDDTPVLASQTQSEPPASTIGQRESEVDSSNRQETQAAEEAPRPQD-EDILTXXXXXXXXXXXXXXXXXXXXXKRRVKERTAAKRVQAFARQRM-----------------------------------------------------------------------------------QGISGIREAKAEVRRRKAQKQLRAKREKEKDDAALQIQSFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQSHVRRKRARLRLLKTVARVAVKEVLKQGLELCVAIVMEEKGRSAPNVRGQGLTNAEEGETGDGSWSASREPSAEAMIASALILNAYDQQHTKSDGIRDASHSPLS-GETELEGGTNPEAIAAVSRRASDGNHTHDEISASGLQEIEAESLRKAEMLAXXXXXXXXXXXXXXXXXXXIVRR---RNNPSSHASPAVVASGCTSRITQELTASRKYEEAATRIQQAFRGWCLARQARTLIERKTQAAIAIQ----------------------LVLEIEAEAGE-IARGKAAVRIQRAVRMRQARDLVGALKQQRDAESQLKLREEEQR 1094
BLAST of mRNA_H-canaliculatus_F_contig1015.169.1 vs. uniprot
Match: A0A6H5KXH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH9_9PHAE) HSP 1 Score: 497 bits (1279), Expect = 3.630e-139 Identity = 434/1017 (42.67%), Postives = 558/1017 (54.87%), Query Frame = 1
Query: 979 IRLLKEIAIRKDQRHGSGIRGREKSTYNATETWATSE--INTTSTAPDQHDSFNTLVAPGQIDPSAPDQRGNPKAITATSTKDERSASKKPSDAGRTNEATDSTSTSTACTTYERAVPPTVEPTSFAQDCVPTARVEGDKSHGSSGGKYDRGGKETLLMSAKVAGSRRIVGEDNSSRACGTGQNSSEGTGLTRRQVQMPGSGEFHGQRTVVPFAQAHDKSAKQGL-TTSELKGTLQMCGVRTADMKLALVGRDPFLQVKACDQLRRINVAAGAGAEASWDDAVVSFSVTDQTLPSDGVQIELCCGNIGAQDLFASGCIPGDVTLQLLCRLQSDGLESVRPSADESAGGNSAVSHASGSLAVLVRLFAEAGGEEAGVCTLNLKFKPDNGAVLASEAEDRRS---SEQTEARREPETAAVEEMEV------------EALATAP-EGVEHRRSSSTLLKGTAKHIEAIEEVCQHAYRQQEHSDQSDRGEAQQD---LASRTEIQSSAASI--------TSNREAKAVGGVPPSLEKVENVLAPHDAAVILQSHTRRRAAKRVAKRRVKERTAANRVQAFARQRMDVSKVRQARERELATMHQERCDAVVRLQGTARRRIAAKAVQXXXXXEAEL----AKRDAEAAQTLQGFARHQLRKRARRRQV-AATKMQGISSIRAAKAEVRRRKAEKQLEAKRKSDEEAAALQIQTAVRRQRAAHEQHLVQSRQRNXXXXXXXXXARSRSAQSKACRQRGRQALLKTAARITVQDALKQALENCVARVMEMRRRAASDCLRQALGNQRDVATGATYSTAPVKKDAKTTVASACILHAFDKKQRPTNEAADESYTSL---PEAGLSLKGSTKIESDAAVTLATADDAPTEKENSELARLMD-EAESFRQLEMAAAAEEQRTAARRIQGLCRKRRARRKTDRRDTLSHSPPVVSAGCTTRFTQELMDSRKSEEAATHIQRAFRTWCLVRQARGLSARKTTAVICIQQATRSRTAFHRVADLRAKQR 3912
+RLL+EIA RK R + RG EK + + ++ I T STA +HD P + P+ Q+ +A++ + TK + A TNE + +STSTACT YE A+ +V+ DC T R G+ S+ + + L +++ ++ G D+S+ G S+ G + RQ Q S G +V F + D SA + T LKGTLQM GVR M+LA+ DPFLQVKACDQLRR NV G GAEASWDDAV+SFSVTDQ L SDGV IELCCGN+G++DL ASG IPGDVT+QL+CRL+S + R AD++ G+SA + SLAV VRLFAE GG++AG+CTLNL F+ G +A+ +D + Q EA+RE ET E++ + + A AP +G E R+SS LL+ TA+HIEAIEEVCQ +Q + +D + + E D LAS+T+ + A++I +SNR+ P L+ KRRV ERTAA RVQAFARQRM VSKVR+AREREL M QER +AVVR+Q TARRRIA VQ A+ AKR AA LQGFAR +L +++RRR+ AAT +QGIS IR AKAE RRRKA+K E AALQIQ+ XXX ARSRSAQS R+R R L+KT AR+ V + LKQ LE CVA VM + R A Q L N + ATG +A + A+ +ASA IL+A+D++ + S+ L PE L+G T E AAV+ + T E S +RL + EAES R+ EM AAA RRIQ LCRKR R+ + SP VV++GCT+R T+EL SRK EEAAT IQ+A R C RQAR L RKT A I IQ R R A RVA L AK++
Sbjct: 13 LRLLREIARRKGTRDSTSSRGGEKRRRSTVVDASATDGIIRTNSTAQQKHDR-----RPDKAIPALELQKPM-EAVSTSHTKGKTDALHDVPPTAPTNEVVELSSTSTACTPYEDALLSSVDSAPIVPDCASTPRAAGNNIRPSTANMEGGEREVSPLAVVEMSEPLQLKGRDDSADVDGDDHPSARGE-IVHRQHQAQDSSMPPGGGGLVDFVRFPDASAAARVGKTPGLKGTLQMSGVRAGGMQLAIGDNDPFLQVKACDQLRRTNVVTGTGAEASWDDAVLSFSVTDQALTSDGVLIELCCGNVGSKDLVASGTIPGDVTMQLVCRLRSKNVGRGRACADDNVAGDSASASGGSSLAVEVRLFAEPGGKDAGLCTLNLDFRQSQGEEVANGVDDVHLPGYAMQDEAQREIETTEEEQIPLAIAAPGVTVTAGQTRAGAPTDGAERRQSSLVLLQETARHIEAIEEVCQLVRQQHKLADGAGQPEGGDDTPVLASQTQSEPPASTIGQQESEVDSSNRQETQAAEEAPRLQDEXXXXXXXXXXXXXXXXXXX-----XXKRRVIERTAAKRVQAFARQRMQVSKVRKARERELMMMEQERNNAVVRIQSTARRRIATNDVQRRRSEVADRRKTQAKRSEGAACVLQGFARRRLSEKSRRRKHRAATTLQGISGIREAKAEARRRKAQKXXXXXXXXXXEDAALQIQSFAXXXXXXXXXXXXXXXXXXXXXVKLQRMARSRSAQSHVRRKRSRLTLVKTVARVAVNEVLKQGLELCVAIVMGEKGRPAPTVHGQGLTNAEEGATGDGSWSATREPSAEAMIASARILNAYDQQHTKADGIRGASHPPLSGEPE----LEGGTNPEDIAAVSRRASGGNHTHNEIS-ASRLQEIEAESLRKAEMLAAAXXXXXXXRRIQRLCRKRIVHRRNN--PLPQASPAVVASGCTSRITEELTASRKCEEAATCIQQALRGCCRARQARTLIERKTQAAIAIQLVVRRRVAVRRVAYLTAKRK 1010
BLAST of mRNA_H-canaliculatus_F_contig1015.169.1 vs. uniprot
Match: A0A7S0HJK8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HJK8_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 4.670e-6 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 802 RSDEKIEDLGRGAVIRLIGNLGMGRYAHRFRAFAVTGSDLASCTEEDLVQIGVSFRPHRIRLLKEIA 1002
R+ + +L G V ++ +LG+GRYA + G DLA CT++DL +IG+ FRPHR+ LL+E+A
Sbjct: 38 RATTPLVELNEGDVACVLHSLGLGRYADVCMVVPLRGRDLAHCTDDDLKEIGIRFRPHRLSLLEEVA 104
BLAST of mRNA_H-canaliculatus_F_contig1015.169.1 vs. uniprot
Match: A0A836CN96_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN96_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.550e-5 Identity = 47/147 (31.97%), Postives = 62/147 (42.18%), Query Frame = 1
Query: 592 AWLPPRVTRLERETHDLLTACRKAGR-------DTGYAAR---LNDEDCRHGCTPEGQSPGRSGECRRISGQSNSYGGSFRSDEKIEDLGRGAVIRLIGNLGMGRYAHRFRAFAVTGSDLASCTEEDLVQIGVSFRPHRIRLLKEIA 1002
+W V R+ ++ DLL +C + R DT AA D CTP +G + + G G V + LG+G YA F V G DL +C +EDL GV FRPHR+RLL+EIA
Sbjct: 121 SWKVDAVHRVHAQSADLLRSCSPSRRRHKRPLCDTNKAAADGGSGRSDVAQQCTPHDDVSLTAG--------------------NLLEAGPGQVCMFLRLLGLGAYAPGFAKRGVVGVDLLACEDEDLAACGVDFRPHRLRLLEEIA 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1015.169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1015.169.1 >prot_H-canaliculatus_F_contig1015.169.1 ID=prot_H-canaliculatus_F_contig1015.169.1|Name=mRNA_H-canaliculatus_F_contig1015.169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=2374bp KNSDTAPPCSLLASGVPRIVILDENAVYDHYMRRLNRVWMRRMKASRNQAback to top mRNA from alignment at H-canaliculatus_F_contig1015:6618..15844- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1015.169.1 ID=mRNA_H-canaliculatus_F_contig1015.169.1|Name=mRNA_H-canaliculatus_F_contig1015.169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9227bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1015:6618..15844- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1015:6618..15844- >mRNA_H-canaliculatus_F_contig1015.169.1 ID=mRNA_H-canaliculatus_F_contig1015.169.1|Name=mRNA_H-canaliculatus_F_contig1015.169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=14244bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1015:6618..15844- (Hapterophycus canaliculatus Oshoro5f female)back to top |