mRNA_H-canaliculatus_F_contig10149.167.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A6H5KPY6_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY6_9PHAE) HSP 1 Score: 433 bits (1114), Expect = 2.370e-140 Identity = 317/590 (53.73%), Postives = 368/590 (62.37%), Query Frame = 1 Query: 22 MVLRQDVSAQVEADASLKRRTEEAVQAASMLSTRAARDMGNGERGGPWGQRGRXXXXXXXXXXXXXXXXXXXXXXRNGRR-----------QIELTNQDGEVVAIPPGDSAALMEGMMLHRRGLACMAQTRTPTNTTATPSPAXXXXXXXXXXXXXXXXXXXXVDGS-QSKKARRRPTSFPRGQQQAVTGDGKEXXXXXXXXXEPR--EGRSGGREERIGEADXXXXXELEXXXXX----GQKGGEDESTA------------------LSARKINDGGLVKDLKGGEDGMEVDSDSLAAD--------KGAEDADGDXXXXXXXXXXXXXGAEHA-----------------RSRLALTASEKLMAQREALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMERRRH---GLTANKASYVDGTLVDQLAQAGFPRPKAVR 1599 MVLRQD+S QVEA+A L RRTEEAVQAAS+LS RAARDM +G R XXXXXXXXXXXXXXXXXXXXXXR G R +IELTNQDG+ +AIPP DSAALMEGMMLHR+GLAC+ + R + +P XXXX S Q+KKARRRP + P+ +A G ++ + GR GG EER E+D + + ++ G+ ES+ AR+ + G V +G S A D G D+ GD + + R+ LTA+EKLMAQRE LGLLMRADEAF+RCDPKYL+AVDNYAYLCLD+VWLLFLMKDMKN+DLAS LAAVEKGFRKAHGE LQRLT LKGE+CAEKLLYVRLHLLQGVVAFL+GD G ASALLLRA EAKALKPNPAL RLMQ+WH V+ EVLQPKVALRALR GRN++DAAWQYLENLRQRKE V+KER RMERRR G+TA+K +Y+ +LV QLA GFPR KA+R Sbjct: 1 MVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARAARDMASGGRXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXRGGNRPEVGGSEVKKLKIELTNQDGKAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSRRSPGAGAAXXXXAVGDGHAPPAGAERAPASVQNKKARRRPQTGPQAAVKAAPGASEDGALSLKPPADRGGGSGRPGGWEERK-ESDCGSVTQAQAQQQQQGGMAEREGKGESSPPRAGLVGRAAAKEQLPERTGAREESTGNEVFTRSPAPEGTAAAPGSPATDAPPAFGEESGGVDSAGDGDVMEVDSDGNDQAGKGSXXXXXXXXXXGTMRGPRRAAPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQGVVAFLRGDSGKASALLLRASGEAKALKPNPALACRLMQKWHTVRLEVLQPKVALRALRAGRNNIDAAWQYLENLRQRKETVRKERKLRMERRRASRLGVTADKKAYISESLVQQLAGIGFPRTKAIR 587
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: D8LR71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR71_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 1.430e-135 Identity = 322/591 (54.48%), Postives = 369/591 (62.44%), Query Frame = 1 Query: 1 VTTGKTIMVLRQDVSAQVEADASLKRRTEEAVQAASMLSTRAARDMGNGERGGPWGQRGRXXXXXXXXXXXXXXXXXXXXXXRNGRRQIELTNQDGEVVAIPPGDSAALMEGMMLHRRGLACMAQTRTPTNTTATPSPAXXXXXXXXXXXXXXXXXXXXVD------GSQSKKARRRPTSFPRGQQQAVTGDGKEXXXXXXXXXEPR--EGRSGGREERIGEADXXXXXELEXXXXX-----GQKGGEDEST---------ALSARKINDGGLVKDLKGGEDGMEVDS--DSLAADKGAEDADGDXXXXXXXXXXXXXGAEHA-------------------------------RSRLALTASEKLMAQREALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMERRRH---GLTANKASYVDGTLVDQLAQAGFPRPKAVR 1599 +T GKTIMVLRQD+S QVEA+A L RRTEEAVQAAS+LS R XXXXXXXXXXXXXXXXXXXXX R +IELTNQDGE +AIPP DSAALMEGMMLHR+GLAC+ + R ++ +P XXXXXXXXXXXX G Q+KKAR RP + P +A G +E + GR GG EER E XXXXX ++ G+ ES+ A + ++ + ++ G +G + AA G+ D G R LTA+EKLMAQRE LGLLMRADEAF+RCDPKYL+AVDNYAYLCLDIVWLLFLMKDMKN+DLAS LAAVEKGFRKAHGE LQRLT LKGE+CAEKLLYVRLHLLQGVVAFL+GD G ASALLLRA EAKALKPNPAL RLMQ+WH V+ EVLQPKVALRALR GRN++DAAWQYLENLRQRKE V+KER RMERRR G+TA+K +YV +LV QLA GFP+ KA+R Sbjct: 61 ITPGKTIMVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNRPEIELTNQDGEAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSSRSPGAXXXXXXXXXXXXXTGDGHAPPAAAERAPAGVQNKKARHRPQTGPEAAAKAAPGASEEGALRLKSPADRGGGSGRPGGWEERKESEGRSVTQEXXXXXXXXXXXTAEREGKGESSPPRAGIVGRAAAKEQLPERTGAREESTGNEGFTPSPAPEGTAAAPGSPPTDAPPAFGEESGGVASAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRGPRRDGPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDIVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQGVVAFLRGDSGEASALLLRASGEAKALKPNPALACRLMQKWHTVRLEVLQPKVALRALRAGRNNIDAAWQYLENLRQRKETVRKERKLRMERRRASRLGMTADKKAYVSESLVQQLAGMGFPKTKAIR 651
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A2K1KV21_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KV21_PHYPA) HSP 1 Score: 121 bits (303), Expect = 1.350e-25 Identity = 83/235 (35.32%), Postives = 132/235 (56.17%), Query Frame = 1 Query: 892 HARSRLALTASEKLMAQREALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRM----ERRRHGLTANKASYVDGTLVDQLAQAGFPR 1584 HA++R L +EAL +L ++E+F CD K+L+AVDN A L +D VW LF+++D++ L +A +LA G +++HG +L+RL L+G +C E LYVRL LL+GVVA+ G A A LL A+ + + L+ + + L Q ++K A R+LRV D A +++ N R + + +E RR E++++G T VD T +++LA G+ R Sbjct: 169 HAKARSMLEQGN----YQEALEVLGMSEESFSLCDRKFLEAVDNVALLQIDTVWCLFMLRDIERLSVARERLARARDGLKRSHGPNLERLRVLQGGFCPELALYVRLELLEGVVAYHSGQTDAARASLLSAQEKFEQLQISDEQVAALAQMGFSMKE-------ARRSLRVSGKDASLAVEFVMNERAKAQQKAEEDDRRQTERREQKKYGKTVG-GKGVDITKLNELASLGYER 391
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A835Z994_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z994_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.980e-25 Identity = 81/221 (36.65%), Postives = 104/221 (47.06%), Query Frame = 1 Query: 937 AQREALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMERRRHGLTANKASYVDGTLVDQLAQAGFPRPKAVR 1599 A+ EAL L+ AD +F+ C +Y VDN+A++CLD WLLFL +D+ NL S L +GF ++HG+DL RL LKG++C E LY RLHLLQGVVA+L G A L V R L+ ++LE RQRK R G TAN+ YV+ TLV QL G +AVR Sbjct: 196 ARAEALQYLLEADTSFRSCSEEYRRHVDNHAHVCLDAAWLLFLTRDLSNLQQTSALLTCAAEGFARSHGQDLNRLRALKGDHCPEVALYARLHLLQGVVAYLAG---------------------------------------------ANEFLEVRRQRLERVAEWLEAERQRK--------------RFGRTANRDQYVNPTLVAQLVSGGVDENQAVR 357
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A8B7Z095_ACAPL (NEDD8 ultimate buster 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z095_ACAPL) HSP 1 Score: 118 bits (296), Expect = 1.400e-24 Identity = 88/243 (36.21%), Postives = 138/243 (56.79%), Query Frame = 1 Query: 886 AEHARSRLALTASEKLMA------QREALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKER----GRRMERRRHGLTANKASYVDGTLVDQLAQAGFPR 1584 +E +ALT +EK A EAL +L+ AD+AF +C + L+AVDNYA LCLDIVW ++++ L A KL E+ FR+++G++LQRL +LKGE E LYVRL+LLQG++AF +G + A ALL +A +L+ + +LMQ ++ F+V + ++ LRA ++ AA + RQR++ ++++ R+ G TAN +V + + L GFP+ Sbjct: 227 SEREALSVALTLNEKGRACLKRKQYGEALLILLEADKAFSQCRSEILNAVDNYAVLCLDIVWCYLCLQNVSELPDAEAKLRTCEECFRRSYGDNLQRLASLKGESTRELALYVRLYLLQGILAFYQGRLDAAQALLQKAEGILASLQVDE---DKLMQVM-SMGFDVREARLGLRA---AFGNVSAAVSKITEQRQRRKEIREKELXXXXXXXRERKLGKTAN-GGWVKLEVYNTLLSMGFPK 461
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A6S7GL12_PARCT (NEDD8 ultimate buster 1-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GL12_PARCT) HSP 1 Score: 118 bits (295), Expect = 1.550e-24 Identity = 82/216 (37.96%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 946 EALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMERRRHGLTANKASYVDGTLVDQLAQAGFPRPKA 1593 EAL LL+ ADE F++C + L+AVDNYA LCLDIVW +K +K+L A L E +K++GE+L+RL +L G EK+LYVRL+LLQ + AF K D AS LL + E LK + A S+++ ++ F + ++ALR+ +D+ A Y+ R+R+E+ K + R+M G T N +V + + L + G+P A Sbjct: 220 EALPLLLGADEEFRQCRSEVLNAVDNYAILCLDIVWCYLQLKSIKDLPNAEEMLKKCEACLKKSYGENLERLISLTGSSAKEKVLYVRLNLLQAICAFHKADTTQASQLLDKVEKEINNLKVDDATLSQMI----SMGFGASESRLALRSCN---SDITMAVGYIS--RKREESKKNKMARKM-----GKTVN-GEWVSVDIYNNLCEMGYPSVSA 420
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: A0A1I8N5T3_MUSDO (Uncharacterized protein n=2 Tax=Musca domestica TaxID=7370 RepID=A0A1I8N5T3_MUSDO) HSP 1 Score: 117 bits (292), Expect = 4.490e-24 Identity = 88/223 (39.46%), Postives = 126/223 (56.50%), Query Frame = 1 Query: 946 EALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLEN----LRQRKENVKKER--GRRMERRRHGLTANKASYVDGTLVDQLAQAGFPRPKAV 1596 EAL LL+ +DE F C+ K+L+AVDNYA + LDIVW +K++ L A +L EK FR+++GE+LQRL TLKG CAEK L +RLHLLQGVV F + A L+ A E ALK + +L LM+ + +E + ++ LRA G N L+ A ++ LR+ ++N K+ER R+ +G N +V+ V L + G+ R V Sbjct: 238 EALILLLESDEKFITCNSKFLEAVDNYALVNLDIVWCYLCLKNVTQLPDAQRRLDICEKSFRRSYGENLQRLITLKGNGCAEKALIMRLHLLQGVVLFHQNRRNEAYEKLIVAGTELDALKVDDSLVVALME----MGYEPYEARLGLRAC--GGN-LEQAINFIHERKAKLREARQNSKEERKLNARLANENNG---NGKDWVNPRSVCTLMEMGYARDVVV 450
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: UPI001F0369F1 (NEDD8 ultimate buster 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0369F1) HSP 1 Score: 114 bits (285), Expect = 4.890e-24 Identity = 76/216 (35.19%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 946 EALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMERRRHGLTANKASYVDGT-----LVDQLAQAGF 1578 +AL L + A+E F++C + L+AVDNYA LCLD+VW ++ +++L A L EK +K++GE+L+RL +L G + EK+LY+RL+LLQ + AF KGD+ AS LL E LK + GS + Q ++ F + ++ALR+ D+ A Y+ R+ K + KER + +R++H + N +G L ++L + G+ Sbjct: 9 DALPLFLAAEEEFRQCRSEVLNAVDNYAILCLDVVWCYLQLQSIRDLPNADELLKKCEKCLKKSYGENLERLVSLTGGFSKEKVLYLRLNLLQAISAFHKGDMRQASRLLDMVEQEVNQLKIDD--GS--LSQMISMGFGASESRLALRSCN---GDVTVAVDYISKKREAKRKLLKER--KEKRKKHKMAVNLGKTANGEWVKIDLFNRLCEMGY 215
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: V4BB15_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BB15_LOTGI) HSP 1 Score: 115 bits (289), Expect = 1.010e-23 Identity = 81/240 (33.75%), Postives = 137/240 (57.08%), Query Frame = 1 Query: 907 LALTASEK---LMAQRE---ALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKEN----VKKERGRRMERRRHGLTANKASYVDGTLVDQLAQAGFPRPKAV 1596 LA+T EK L+ Q+ AL LL+ AD F++C LDAVDNYA LCLDIVW +K++ L A +L A E+ +++G ++RLT +KGE +L+++LHLLQG++AF + ++ A LL +A + K L +P L +++M ++ F + ++ LRA ++ Y+ +++ KE VK ER R + R++G T+N +++ + ++ L + G+ + AV Sbjct: 226 LAMTLHEKGRSLLKQKNISSALLLLIEADTEFKKCRASILDAVDNYAVLCLDIVWCYLCLKNLDQLPDAERRLKACEECLIRSYGSHMERLTAVKGESSTAMVLFMKLHLLQGIIAFHQHNIDTAKTLLKQAEDDIKRLSVDPELITQVM----SMGFNEREARLGLRACD---GNIPQTCDYIIKVKKEKEEIMEKVKGERENRKKVRQYGRTSN-GDWLNASNLEMLLKMGYRKGPAV 457
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Match: UPI00106DB327 (NEDD8 ultimate buster 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106DB327) HSP 1 Score: 115 bits (289), Expect = 1.130e-23 Identity = 81/216 (37.50%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 946 EALGLLMRADEAFQRCDPKYLDAVDNYAYLCLDIVWLLFLMKDMKNLDLASHKLAAVEKGFRKAHGEDLQRLTTLKGEYCAEKLLYVRLHLLQGVVAFLKGDVGNASALLLRARAEAKALKPNPALGSRLMQQWHAVKFEVLQPKVALRALRVGRNDLDAAWQYLENLRQRKENVKKERGRRMER----RRHGLTANKASYVDGTLVDQLAQAGFP 1581 EAL LL+ ADE F++C + L+AVDNYA LCLDIVW +K +K+L A L E +K++GE+L+RL +L G EK+LYVRL+LLQ + AF K + AS LL + E +LK + A S+++ ++ F + ++ALR+ D+ A Y+ R+ E KER ++ R+ G TA K +V + + L + G+P Sbjct: 261 EALPLLLGADEEFRQCRSEVLNAVDNYAILCLDIVWCYLQLKSIKDLPNAEEMLKNCEACLKKSYGENLERLISLTGSSTKEKVLYVRLNLLQAICAFHKAETTRASHLLNKVEKEIDSLKVDDATLSQMI----SMGFGASESRLALRSCN---GDITMAVGYISRKREENEKQLKERRXXXKQQKFARKLGKTA-KGEWVSVDIYNNLREMGYP 468 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10149.167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10149.167.1 >prot_H-canaliculatus_F_contig10149.167.1 ID=prot_H-canaliculatus_F_contig10149.167.1|Name=mRNA_H-canaliculatus_F_contig10149.167.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=526bp MVLRQDVSAQVEADASLKRRTEEAVQAASMLSTRAARDMGNGERGGPWGQback to top mRNA from alignment at H-canaliculatus_F_contig10149:113..4608+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10149.167.1 ID=mRNA_H-canaliculatus_F_contig10149.167.1|Name=mRNA_H-canaliculatus_F_contig10149.167.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4496bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10149:113..4608+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10149:113..4608+ >mRNA_H-canaliculatus_F_contig10149.167.1 ID=mRNA_H-canaliculatus_F_contig10149.167.1|Name=mRNA_H-canaliculatus_F_contig10149.167.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3156bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10149:113..4608+ (Hapterophycus canaliculatus Oshoro5f female)back to top |