Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1093 |
| Cds size | 621 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928642.6320329-CDS-H-canaliculatus_F_contig10133:3914..4535 | 1622928642.6320329-CDS-H-canaliculatus_F_contig10133:3914..4535 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10133 3915..4535 + |
| 1696845509.4722092-CDS-H-canaliculatus_F_contig10133:3914..4535 | 1696845509.4722092-CDS-H-canaliculatus_F_contig10133:3914..4535 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10133 3915..4535 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928642.6438625-UTR-H-canaliculatus_F_contig10133:4535..4831 | 1622928642.6438625-UTR-H-canaliculatus_F_contig10133:4535..4831 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10133 4536..4831 + |
| 1696845509.4859805-UTR-H-canaliculatus_F_contig10133:4535..4831 | 1696845509.4859805-UTR-H-canaliculatus_F_contig10133:4535..4831 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10133 4536..4831 + |
| 1622928642.6543949-UTR-H-canaliculatus_F_contig10133:4862..5038 | 1622928642.6543949-UTR-H-canaliculatus_F_contig10133:4862..5038 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10133 4863..5038 + |
| 1696845509.495864-UTR-H-canaliculatus_F_contig10133:4862..5038 | 1696845509.495864-UTR-H-canaliculatus_F_contig10133:4862..5038 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10133 4863..5038 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10133.159.1 >prot_H-canaliculatus_F_contig10133.159.1 ID=prot_H-canaliculatus_F_contig10133.159.1|Name=mRNA_H-canaliculatus_F_contig10133.159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=207bp
MLESSRSRSVALGRPQGTALSVFSVGSFPLATPVYSLFKENITTPLERLL
FSLCLGCPSLNVSLCLCQTIPFLLSPRLRFSASLPAWVVTFCPVSLTHSH
TRHIFSHLLTCCMPVILALRAQSLSLSLSLSLSLDVRLSDYPTTSLPFSP
VSVSQSQCLSLSLCVTYSADVFVRRLYTSHVSHFFKLQAYTQRENDDRGE
NSRRRF* back to topmRNA from alignment at H-canaliculatus_F_contig10133:3915..5038+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10133.159.1 ID=mRNA_H-canaliculatus_F_contig10133.159.1|Name=mRNA_H-canaliculatus_F_contig10133.159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1124bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10133:3915..5038+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTTAGAGTCCAGCAGGAGCCGTTCGGTCGCTCTCGGGCGCCCACAAGG
CACCGCTTTGAGTGTTTTCAGCGTTGGGAGTTTTCCGCTCGCCACTCCAG
TCTACTCTCTTTTTAAAGAAAACATAACAACACCGTTGGAACGCCTCCTC
TTCTCTCTTTGTCTCGGCTGTCCATCGCTCAATGTCTCTCTCTGCCTGTG
TCAGACTATCCCATTTCTTCTCTCTCCCCGCCTCCGTTTTTCAGCCTCGC
TGCCTGCCTGGGTTGTCACATTTTGTCCTGTATCTCTGACACACTCTCAT
ACACGTCACATCTTCTCACATCTTCTGACATGTTGCATGCCGGTAATTCT
CGCGTTGCGTGCTCAATCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TAGATGTACGTCTCTCAGACTATCCCACTACAAGCTTGCCCTTTTCTCCC
GTCTCTGTTTCGCAGTCTCAGTGTCTCTCGCTTTCTCTGTGCGTTACATA
CTCTGCCGACGTATTCGTTCGCAGACTCTACACGTCCCACGTCTCACATT
TTTTCAAACTGCAAGCGTACACGCAGAGAGAAAACGATGACAGAGGCGAA
AACAGCAGGAGAAGGTTCTGAAGTACACGCAGACGTGAAACTGAAAGCAA
CAGGGAAACCGAACACTCATCCCTCGGAAAATGGTGCCCTCAATGTCGCA
GAACAATTGCTTGCAGGGGTCACTTCTCCAGGTCTCACGGGTGGCCTGTT
GTCTCATACGTTGGTGTGTGCCATTCGTTTGTCTGCCGTCGACGGCACGG
TCAGGACCGAGCAGTCAACTGCAATGCGACGTCATGTCCTTCAGCTCGCT
TAAACGAGGTCTAGACACGCCGATGTACGACAACTCAACGTTCGTCGGCG
AAGGGGACGAAATCCGCGTTCCGAGATATTTACATACCAGGTACTGAGCA
TTTTGAGACAGGTCTCTTCTTCCCATCATTCTCGGCCTACACGCGAGCTC
GACCTTCCACCCCACGCCGCACTCCCTACACGCATCGCACGCAACTCACG
CTTGCCCACGCACACGAAATCACTCTTACACACAGACAGGCAAACCACGC
ACACCACTTTTCCAGGCATCTTGG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10133:3915..5038+ >mRNA_H-canaliculatus_F_contig10133.159.1 ID=mRNA_H-canaliculatus_F_contig10133.159.1|Name=mRNA_H-canaliculatus_F_contig10133.159.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1242bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10133:3915..5038+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTTAGAGTCCAGCAGGAGCCGTTCGGTCGCTCTCGGGCGCCCACAAGG
CACCGCTTTGAGTGTTTTCAGCGTTGGGAGTTTTCCGCTCGCCACTCCAG
TCTACTCTCTTTTTAAAGAAAACATAACAACACCGTTGGAACGCCTCCTC
TTCTCTCTTTGTCTCGGCTGTCCATCGCTCAATGTCTCTCTCTGCCTGTG
TCAGACTATCCCATTTCTTCTCTCTCCCCGCCTCCGTTTTTCAGCCTCGC
TGCCTGCCTGGGTTGTCACATTTTGTCCTGTATCTCTGACACACTCTCAT
ACACGTCACATCTTCTCACATCTTCTGACATGTTGCATGCCGGTAATTCT
CGCGTTGCGTGCTCAATCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TAGATGTACGTCTCTCAGACTATCCCACTACAAGCTTGCCCTTTTCTCCC
GTCTCTGTTTCGCAGTCTCAGTGTCTCTCGCTTTCTCTGTGCGTTACATA
CTCTGCCGACGTATTCGTTCGCAGACTCTACACGTCCCACGTCTCACATT
TTTTCAAACTGCAAGCGTACACGCAGAGAGAAAACGATGACAGAGGCGAA
AACAGCAGGAGAAGGTTCTGAATGTTAGAGTCCAGCAGGAGCCGTTCGGT
CGCTCTCGGGCGCCCACAAGGCACCGCTTTGAGTGTTTTCAGCGTTGGGA
GTTTTCCGCTCGCCACTCCAGTCTACTCTCTTTTTAAAGAAAACATAACA
ACACCGTTGGAACGCCTCCTCTTCTCTCTTTGTCTCGGCTGTCCATCGCT
CAATGTCTCTCTCTGCCTGTGTCAGACTATCCCATTTCTTCTCTCTCCCC
GCCTCCGTTTTTCAGCCTCGCTGCCTGCCTGGGTTGTCACATTTTGTCCT
GTATCTCTGACACACTCTCATACACGTCACATCTTCTCACATCTTCTGAC
ATGTTGCATGCCGGTAATTCTCGCGTTGCGTGCTCAATCGCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTAGATGTACGTCTCTCAGACTATCCCACT
ACAAGCTTGCCCTTTTCTCCCGTCTCTGTTTCGCAGTCTCAGTGTCTCTC
GCTTTCTCTGTGCGTTACATACTCTGCCGACGTATTCGTTCGCAGACTCT
ACACGTCCCACGTCTCACATTTTTTCAAACTGCAAGCGTACACGCAGAGA
GAAAACGATGACAGAGGCGAAAACAGCAGGAGAAGGTTCTGA back to top
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