mRNA_H-canaliculatus_F_contig1013.155.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.760e-27 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLED 426 K +L + SHDIK QW + KGT R VI+F+AE+GL ATTSQ+QHRED +A+ +D+D+L + AA P DNCD +P V V GEGPH+ A T++ V VG ++D Sbjct: 688 KAILRGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDD 798
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5KSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG4_9PHAE) HSP 1 Score: 113 bits (283), Expect = 2.120e-26 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 118 VASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLED 426 + SHDIK QW + KGT R V +F+AEHGL ATTSQ+QHRED +A+ +D+D+L + AA P DNCD +P V V GEGPH+ A T++ V VG ++D Sbjct: 434 MGSHDIKGAQWAKSKGTCREVTNFVAEHGLWATTSQIQHREDYHARFVEDKDLLSQDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDD 536
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.330e-26 Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLEDASRLRKRR 450 K + + + DIK QW + KGT R VIDF+A HGL ATTSQ+QHRED +AK +D+DIL K AA DNCD +P V G+GPHIS A T+V V V ++DA+ LR+RR Sbjct: 537 KAIFPGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDNDPRVGERQGKGPHISFIAATAVTVGDDVVRMQDAASLRRRR 655
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5L577_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L577_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.970e-26 Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 130 DIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLEDASRLRKRR 450 DIK QW + KGT R VIDF+A HGL ATTSQ+QHRED +AK +D+DIL K A DN D +P V GEGPHIS A T+V V VG ++DA+ LR+RR Sbjct: 94 DIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAEIASDNSDHDPRVGERQGEGPHISFIAATAVTVGDDVGRMQDAASLRRRR 200
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5JHN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHN2_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.310e-25 Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 118 VASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLEDASRLRKR 447 +ASHDIK Q + KGT R VI+F+AEHGL ATTS++QHRED +A+ D+D+ + AA P DNCD +P V V GEGPH+ A T++ V VG ++D S ++ R Sbjct: 1 MASHDIKGAQRAKSKGTCREVINFVAEHGLWATTSKIQHREDFHARFVDDKDLQSQDAECAAIPLDNCDFDPRVVVGQGEGPHLPFIAATALTVGPDVGGMDDCSLVKSR 110
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5L8Z0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Z0_9PHAE) HSP 1 Score: 109 bits (273), Expect = 5.560e-25 Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVG 414 K +L + SHDIK QW + KGT R VI+F+AE+GL ATTSQ+QHRED +A+ +D+D+L + AA P DNCD +P V V GEGPH+ A ++ V VG Sbjct: 688 KAILRGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAAMALTVGPDVG 794
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5JUI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI8_9PHAE) HSP 1 Score: 108 bits (270), Expect = 6.830e-25 Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLEDASRLRKRR 450 K + + + DIK QW + KGT R VIDF+A HGL ATTSQ+QHRED AK +D+D L K AA DNCD +P V EGPHIS A T+V V VG +++A+ LR+RR Sbjct: 259 KAIFPGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYRAKVVEDKDTLPKGDQCAAIANDNCDHDPRVGERQWEGPHISFIAATAVTVGDDVGRMQNAASLRRRR 377
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5JM20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM20_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.920e-24 Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLP----------GEGPHISTTACTSVAVRGGVGPLEDASRLRKRR 450 K + + + DIK QW + KGT R VIDF+A HGL ATTS +QHRED +AK +D+DIL K AA DNCD +P V GEGPHIS + T+V V VG ++DA+ LR+RR Sbjct: 537 KAIFPGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSPVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDHDPRVGAXXXXXXXXXERQGEGPHISFISATAVTVGDNVGRIQDAASLRRRR 665
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5JL54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL54_9PHAE) HSP 1 Score: 104 bits (259), Expect = 4.020e-23 Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 94 KGLLGWPDVASHDIKATQWTRLKGTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLEDASRLRKR 447 K +L + SHDIK QW + K T R VI+F+AEHGL ATTSQ QHRED +A+ +D+D+L + AA P +N D +P V V EGPH+ A T++ V VG ++D +R R Sbjct: 462 KAILRGRHMGSHDIKGAQWGKSKSTCRDVINFVAEHGLWATTSQTQHREDFHARFVEDKDLLSQDAECAAIPLNNYDFDPRVRVGQREGPHLPFIAATALTVGPDVGRMDDWWLVRSR 579
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Match: A0A6H5KHQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ7_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 7.800e-20 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 163 GTTRAVIDFMAEHGLCATTSQLQHREDSYAKHTKDEDILDKIVTAAAFPFDNCDMEPTVNVLPGEGPHISTTACTSVAVRGGVGPLED 426 GT R VI+F+AEHGL ATTSQ+QHRED + + +D+D+L +AA P DNCD +P V V GEGPH+ A T++ V VG ++D Sbjct: 2 GTCRDVINFVAEHGLWATTSQIQHREDYHPRFVEDKDLLSPDAESAAIPLDNCDFDPRVEVGQGEGPHLPFIAATALTVGPDVGRMDD 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1013.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 12 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1013.155.1 >prot_H-canaliculatus_F_contig1013.155.1 ID=prot_H-canaliculatus_F_contig1013.155.1|Name=mRNA_H-canaliculatus_F_contig1013.155.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=151bp PILRGRCKHFPFQSTAAFSPQAGRDAVHECRKGLLGWPDVASHDIKATQWback to top mRNA from alignment at H-canaliculatus_F_contig1013:26276..26728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1013.155.1 ID=mRNA_H-canaliculatus_F_contig1013.155.1|Name=mRNA_H-canaliculatus_F_contig1013.155.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=453bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1013:26276..26728+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1013:26276..26728+ >mRNA_H-canaliculatus_F_contig1013.155.1 ID=mRNA_H-canaliculatus_F_contig1013.155.1|Name=mRNA_H-canaliculatus_F_contig1013.155.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=906bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1013:26276..26728+ (Hapterophycus canaliculatus Oshoro5f female)back to top |