mRNA_H-canaliculatus_F_contig10120.150.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: D7FZL0_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL0_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 1.090e-16 Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RINYIYLFDMDPRAVSSPL+VFNNVAAETV+YLANLLLYYK Sbjct: 334 RINYIYLFDMDPRAVSSPLQVFNNVAAETVVYLANLLLYYK 374
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 5.030e-10 Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 43 MDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 MDPRAVSSPL+VFNNVAAETV+YLANLLLYYK Sbjct: 1 MDPRAVSSPLQVFNNVAAETVVYLANLLLYYK 32
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A7S1UZJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZJ6_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.830e-8 Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RINYI+LFD+DPR V SP+ +FN+V ET++++ +LLYYK Sbjct: 64 RINYIFLFDLDPRTVDSPITIFNDVVDETLVFMFLMLLYYK 104
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A835YP28_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP28_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 3.050e-8 Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RIN++YLF++DPR S PL +FN+VA ETV++LA LL YYK Sbjct: 483 RINFLYLFELDPRHQSPPLALFNDVAGETVVFLACLLAYYK 523
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: B8LC07_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC07_THAPS) HSP 1 Score: 54.3 bits (129), Expect = 2.720e-7 Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RINYIYLF+ DPR V +P+ +FN+ ET ++L ++L+YYK Sbjct: 454 RINYIYLFEFDPRNVDTPIDIFNDAVDETFVFLVSMLMYYK 494
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A7S2KW14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KW14_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 3.720e-7 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RINYIYLF+ DPR V +P+ +FN+ ET+++L +LLYYK Sbjct: 49 RINYIYLFEFDPRNVDTPIDIFNDAVDETLVFLICMLLYYK 89
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A7S4RIS9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RIS9_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 9.540e-7 Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 RINYIYLFD +PR V +P+ ++N+ ET+++L +LLYYK Sbjct: 500 RINYIYLFDFNPRIVDTPITIYNDCVDETLVFLILMLLYYK 540
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A3R7J8N4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8N4_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 9.550e-7 Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 7 RSCRINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 R+ RINY Y+F++DPR V S +VF++ T++YLAN+L+YYK Sbjct: 569 RAARINYRYIFELDPRRVQSYPQVFSDATNMTIVYLANVLMYYK 612
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: A0A1Z5JJL2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJL2_FISSO) HSP 1 Score: 52.0 bits (123), Expect = 1.790e-6 Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 1 Query: 16 RINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 R+NYIY+ D+DP V SP+ +FN+ +T+ YL +LLYYK Sbjct: 451 RVNYIYIMDLDPHLVRSPIAIFNDSVDDTLFYLITMLLYYK 491
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Match: D0NYH6_PHYIT (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NYH6_PHYIT) HSP 1 Score: 51.6 bits (122), Expect = 2.440e-6 Identity = 23/44 (52.27%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 7 RSCRINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYK 138 R+ RINY Y+F+++PR V S +VF++ T++YLAN+LLYYK Sbjct: 331 RAARINYHYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYK 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10120.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10120.150.1 >prot_H-canaliculatus_F_contig10120.150.1 ID=prot_H-canaliculatus_F_contig10120.150.1|Name=mRNA_H-canaliculatus_F_contig10120.150.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=46bp MIRSCRINYIYLFDMDPRAVSSPLRVFNNVAAETVIYLANLLLYYKback to top mRNA from alignment at H-canaliculatus_F_contig10120:4702..4839- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10120.150.1 ID=mRNA_H-canaliculatus_F_contig10120.150.1|Name=mRNA_H-canaliculatus_F_contig10120.150.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=138bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10120:4702..4839- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10120:4702..4839- >mRNA_H-canaliculatus_F_contig10120.150.1 ID=mRNA_H-canaliculatus_F_contig10120.150.1|Name=mRNA_H-canaliculatus_F_contig10120.150.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=276bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10120:4702..4839- (Hapterophycus canaliculatus Oshoro5f female)back to top |