mRNA_H-canaliculatus_F_contig10104.137.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: D7FMV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV6_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.360e-37 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR 204 SPPLFRQGNLDHFE+IV+AVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR Sbjct: 338 SPPLFRQGNLDHFESIVQAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR 405
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A836CA04_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA04_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.840e-23 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR 204 SP LFRQ NLD F IVEAV +W P G+ VCELYAGVG+LGL+VA KA +VRCSDVN+ NPR+F R+R Sbjct: 379 SPALFRQANLDQFGRIVEAVREWTPNGAAVCELYAGVGLLGLSVADKAEWVRCSDVNAANPRAFARAR 446
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A7S1NUF9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NUF9_9EUGL) HSP 1 Score: 83.2 bits (204), Expect = 3.040e-17 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 4 PPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAK--AAFVRCSDVNSFNPRSFERS 201 P +FRQ NLD FE I++ V +WVPEGS VCELYAGVG++GLNV + A +VRCSD N N R F+ + Sbjct: 177 PTVFRQANLDAFEHIIDTVCEWVPEGSRVCELYAGVGIIGLNVLLRRSAQWVRCSDGNPNNLRPFQEA 244
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A7S2DGR0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGR0_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.960e-15 Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERS 201 SP FRQ NLD F I+E V VP S VCELYAGVG++GL++A K A VRCSD N N R+FE++ Sbjct: 189 SPMNFRQANLDAFAGILEQVASHVPVDSVVCELYAGVGLIGLSIAHKCAEVRCSDENPANVRAFEKA 255
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A7S4CJ64_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CJ64_9EUGL) HSP 1 Score: 73.2 bits (178), Expect = 6.470e-15 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAK--AAFVRCSDVN 171 +P +FRQ NLD FE I++ VV +VP+GS VCELY+G+GV+GLNV + A +VRCSD N Sbjct: 12 TPAIFRQANLDAFERIIDQVVAFVPKGSRVCELYSGIGVIGLNVLMRTEAEWVRCSDNN 70
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A8J6CFF2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFF2_DIALT) HSP 1 Score: 75.1 bits (183), Expect = 3.230e-14 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 1 Query: 4 PPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVN 171 P +FRQ NLD FEAIV V D VP G+ V ELYAGVG+LGLN +A VRCSDVN Sbjct: 261 PFVFRQANLDAFEAIVRQVADAVPAGAAVAELYAGVGILGLNCVERALSVRCSDVN 316
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: B7G3V9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3V9_PHATC) HSP 1 Score: 74.3 bits (181), Expect = 6.400e-14 Identity = 40/74 (54.05%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAA-------FVRCSDVNSFNPRSFERS 201 SP FRQGNLD F+ + V VP GS VCELYAGVG+LGL A A ++RCSD N NPR F+RS Sbjct: 360 SPLTFRQGNLDGFDVLATDVARAVPGGSKVCELYAGVGLLGLTTLAHLAKEGTPLEWIRCSDENPSNPRCFQRS 433
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A7S2SN36_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN36_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.220e-13 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR 204 SP +FRQ NLD F IV + +P GS VCELY G+G++GL+V + +RCSD N N +SFE SR Sbjct: 30 SPQVFRQANLDAFADIVARLSQHIPPGSIVCELYGGIGLIGLSVVHLCSELRCSDDNPNNEKSFELSR 97
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A1Z5K4J9_FISSO (Methyltransferase-like protein 6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4J9_FISSO) HSP 1 Score: 69.7 bits (169), Expect = 2.680e-12 Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGL----------NVAAKAAFVRCSDVNSFNPRSFERS 201 SP FRQGNLD F+ I E V +P GS VCELYAGVG+LGL N +A ++RCSD N N R F R+ Sbjct: 254 SPLTFRQGNLDGFDIIAEDVARAIPGGSKVCELYAGVGLLGLTALSYHANEENGSAPLPWIRCSDENPSNSRCFYRA 330
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Match: A0A7S4A483_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A483_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 9.250e-12 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 1 SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSR 204 +P FRQ NL F +VE + WVP+ S VCELYAGVG +GL + K + +RCS+ N FE+SR Sbjct: 274 TPLTFRQANLRAFAGLVERLATWVPDDSHVCELYAGVGAIGLALRPKLSSLRCSETNENVLDCFEKSR 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10104.137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10104.137.1 >prot_H-canaliculatus_F_contig10104.137.1 ID=prot_H-canaliculatus_F_contig10104.137.1|Name=mRNA_H-canaliculatus_F_contig10104.137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=69bp SPPLFRQGNLDHFEAIVEAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFback to top mRNA from alignment at H-canaliculatus_F_contig10104:196..402+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10104.137.1 ID=mRNA_H-canaliculatus_F_contig10104.137.1|Name=mRNA_H-canaliculatus_F_contig10104.137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=207bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10104:196..402+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10104:196..402+ >mRNA_H-canaliculatus_F_contig10104.137.1 ID=mRNA_H-canaliculatus_F_contig10104.137.1|Name=mRNA_H-canaliculatus_F_contig10104.137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=414bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10104:196..402+ (Hapterophycus canaliculatus Oshoro5f female)back to top |