mRNA_H-canaliculatus_F_contig101.127.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.250e-73 Identity = 135/234 (57.69%), Postives = 156/234 (66.67%), Query Frame = 2 Query: 2 FDLEK-LLGEAIPYLRPLENVVARFCKS*QEKVSYITDRLGAENETLRQRAFRLVRAGVDFGVAEHSVTALQMELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHPMTA*MYVVLKCGYAGATS 700 F LEK L LRPLE+V+ + + KVSYIT LGA+++ R+RA R +RAGV FG AEHSV ALQM LS+D LGGGLD+ GRLPGY +SF+F R RSF ++GHF +G+RVG WL PD PHEGNHQG CQ K GG AR QL N HEQNHSK KHLPSV+GMGFDTF FN L NE E+ INRKTC LAV+ AT + V KCGYA A S Sbjct: 397 FVLEKYFLYSHAETLRPLEDVIDNYHNT---KVSYITHLLGAKDDIRRERASRFIRAGVGFGEAEHSVKALQMALSSDSLGGGLDDHGRLPGYGISFHFQRFRSFGDYGHFYDGKRVGLWLAPDGPHEGNHQGKCQEKFGGLAR----CPQLTGVN---CNAHEQNHSKNKKHLPSVNGMGFDTFNFNVNLINESEHRGINRKTCDLAVSSATQQAYQ--VPVRQKCGYADAAS 618
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 240 bits (613), Expect = 7.790e-73 Identity = 122/205 (59.51%), Postives = 146/205 (71.22%), Query Frame = 2 Query: 35 PYLRPLENVVARFCKS*QEKVSYITDRLGAENE-TLRQRAFRLVRAGVDFGVAEHSVTALQMELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 P LR LE +V + + K YIT LGAE + +RA+RL+R+GV FGVAEHSV ALQ+ LS+DC+GGG+ EDG+LPGY + FNF R S+D +GHF G+RVG WLGPD PHEGNHQGSCQAK GG L++ R N HEQNHSK+ K LPSV+GMGFDTFTFN L NELEN INRKTC+LAV+ A+ HP Sbjct: 334 PVLRDLEGIVELYH---ERKARYITRLLGAEPDGDASERAYRLIRSGVGFGVAEHSVKALQIALSSDCVGGGVGEDGKLPGYSIDFNFKRTPSYDNYGHFYGGKRVGLWLGPDGPHEGNHQGSCQAKFGG-------LTRCRQITGTNCNPHEQNHSKKIKFLPSVTGMGFDTFTFNVTLINELENVKINRKTCTLAVSSASGHP 528
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.080e-72 Identity = 130/215 (60.47%), Postives = 153/215 (71.16%), Query Frame = 2 Query: 5 DLEKLLGEAIPYLRPLENVVARFCKS*QEKVSYITDRLGAENETLRQRAFRLVRAGVDFGVAEHSVTALQMELSADCL---GGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATD 640 D+E+ +GEA P LR LE+ V + Q+KV++ TD L A + +RA+RLV+AGV FGVAEHSVTALQM LS+D L GG LD+DG+LPGY VSFNF R RSF EFGH +GQRVG WLGPD PHEGNHQG CQ K+GG +R + N HEQNHSK+TK LPSVSGMGFDTFTFN L NELEN INRKT +AV+ AT+ Sbjct: 303 DIEEGVGEAAPVLRKLEDTVNLYH---QKKVTFTTDLLAAVDNDSSERAYRLVQAGVGFGVAEHSVTALQMALSSDSLTIWGGELDKDGKLPGYGVSFNFKRERSFGEFGHCYDGQRVGVWLGPDGPHEGNHQGHCQMKYGGVSRCPQPTG-------VNCNAHEQNHSKKTKRLPSVSGMGFDTFTFNIILINELENVKINRKTWIVAVSSATE 507
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5JBW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW4_9PHAE) HSP 1 Score: 207 bits (527), Expect = 2.120e-64 Identity = 114/200 (57.00%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 101 YITDRLGAENETLRQRAFRLVRAGVDFGVAEHSVTALQMELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHPMTA*MYVVLKCGYAGATS 700 +ITD L A + A+ V FGVAEHSV ALQ LS+D LGG LD+DG+LPGY VS NF R RSF EFGHF +GQRVG WLGPD PHEGNHQGSCQ K+GG +R QL NVHEQNHSK+TKHLPSVSGMGFDTFT N L NELEN + + D P M+ V KCG A A S Sbjct: 2 FITDSLDAVGNYSSEPAW------VGFGVAEHSVKALQRALSSDSLGGQLDKDGQLPGYGVSLNFNRERSFGEFGHFYDGQRVGLWLGPDGPHEGNHQGSCQMKYGGVSR----CPQLTGVN---CNVHEQNHSKKTKHLPSVSGMGFDTFTLNITLINELENVKSTARHAAWQSKVPPDTPTNICMHAVRKCGLAVAAS 188
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5JIR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR9_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.080e-60 Identity = 97/144 (67.36%), Postives = 106/144 (73.61%), Query Frame = 2 Query: 215 MELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 M LS+D LGG D+DG+LPGY VSFNF R RSF EFGHF +GQRVG WLGPD PHEGNHQG CQ K GG R QL NVHEQNH K+TKHLPSVSGMGFDTFT+N L NELEN INRKTCS+AV+ A +HP Sbjct: 1 MALSSDSLGGQFDKDGKLPGYGVSFNFKRERSFGEFGHFYDGQRVGLWLGPDGPHEGNHQGPCQMKDGGVFR----CPQLTGVN---CNVHEQNHEKKTKHLPSVSGMGFDTFTYNITLINELENVKINRKTCSVAVSSAIEHP 137
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5KLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN2_9PHAE) HSP 1 Score: 195 bits (495), Expect = 5.510e-56 Identity = 97/145 (66.90%), Postives = 108/145 (74.48%), Query Frame = 2 Query: 212 QMELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 QM LS+D LGG LD++G+LPGY VSFN R RSF EFGHF +GQRVG WLGPD P EGNHQG CQ K+GG +R QL NVHEQNH K+TKHLPSVSGMGFDTFTFN L NELEN INRKTCS+AV+ A +HP Sbjct: 334 QMALSSDSLGGQLDKNGKLPGYGVSFNLKRERSFGEFGHFYDGQRVGLWLGPDGPLEGNHQGPCQMKYGGVSR----CPQLTGVN---CNVHEQNHEKKTKHLPSVSGMGFDTFTFNITLINELENVKINRKTCSVAVSSAIEHP 471
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5K302_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K302_9PHAE) HSP 1 Score: 169 bits (428), Expect = 3.080e-49 Identity = 82/135 (60.74%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 242 GGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 GG+ EDG+L GY +SFNF R R F FGHF + +RVG WL PD PHEGNHQGSCQ G + + Q+ T N HEQNH+K++K LPSVSGMGFDTFTFN L NELEN INRKTC+LAV AT HP Sbjct: 36 GGVGEDGKLSGYDISFNFRRGREFSSFGHFYDNKRVGLWLAPDGPHEGNHQGSCQDMFAGLS----SCPQISGTN---CNTHEQNHAKKSKFLPSVSGMGFDTFTFNITLINELENVEINRKTCNLAVASATQHP 163
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5JV99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV99_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.320e-47 Identity = 83/128 (64.84%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 263 RLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNHQGSCQAKHGGAARFHKTLSQLRATKPFLSNVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 +LPGY VSFNF R RSF +FGHF +GQRVG WLGPD PHEGNHQG CQ K+GG +R QL NVHEQ HSK+ +HLPS S MGFDTFTFN L N+LEN INRKTCS+AV+ AT+HP Sbjct: 199 KLPGYGVSFNFKRERSFGKFGHFYDGQRVGLWLGPDGPHEGNHQGPCQMKYGGESR----CPQLTGVN---CNVHEQKHSKKPRHLPSGSVMGFDTFTFNITLINDLENVKINRKTCSVAVSSATEHP 319
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5KBD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD1_9PHAE) HSP 1 Score: 158 bits (399), Expect = 3.940e-43 Identity = 81/129 (62.79%), Postives = 96/129 (74.42%), Query Frame = 2 Query: 5 DLEKLLGEAIPYLRPLENVVARFCKS*QEKVSYITDRLGAENETLRQRAFRLVRAGVDFGVAEHSVTALQMELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGPDRPHEGNH 391 D+E+ +GEA P LR LE+ V F Q+KV++ITD L A + +RA RLV+A V FGVAEHSV AL M LS+D LGG LD+DG+LPG+ VSFNF R RSF EFGHF +GQRVG WLGPD PHEGNH Sbjct: 234 DIEEGVGEAAPVLRKLEDAVDLFH---QKKVTFITDSLDAVDHDTSERACRLVQARVGFGVAEHSVKALHMALSSDSLGGELDKDGKLPGHGVSFNFKRERSFGEFGHFYDGQRVGLWLGPDGPHEGNH 359
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Match: A0A6H5K6F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6F2_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.720e-23 Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 479 NVHEQNHSKETKHLPSVSGMGFDTFTFNAALTNELENAAINRKTCSLAVTRATDHP 646 NVHEQNHSK+T+HLPSVSGMGFDTFTFN L NELEN INRKTCS+AV+ AT+HP Sbjct: 18 NVHEQNHSKKTEHLPSVSGMGFDTFTFNITLINELENVKINRKTCSVAVSSATEHP 73 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig101.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig101.127.1 >prot_H-canaliculatus_F_contig101.127.1 ID=prot_H-canaliculatus_F_contig101.127.1|Name=mRNA_H-canaliculatus_F_contig101.127.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=148bp MELSADCLGGGLDEDGRLPGYRVSFNFTRNRSFDEFGHFCEGQRVGFWLGback to top mRNA from alignment at H-canaliculatus_F_contig101:20150..21559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig101.127.1 ID=mRNA_H-canaliculatus_F_contig101.127.1|Name=mRNA_H-canaliculatus_F_contig101.127.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1410bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:20150..21559+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig101:20150..21559+ >mRNA_H-canaliculatus_F_contig101.127.1 ID=mRNA_H-canaliculatus_F_contig101.127.1|Name=mRNA_H-canaliculatus_F_contig101.127.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=888bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:20150..21559+ (Hapterophycus canaliculatus Oshoro5f female)back to top |