mRNA_H-canaliculatus_F_contig101.125.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A6H5JKX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX4_9PHAE) HSP 1 Score: 464 bits (1193), Expect = 9.590e-155 Identity = 241/275 (87.64%), Postives = 255/275 (92.73%), Query Frame = 2 Query: 815 SSLDRFLLILGADDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQAT-FAKLVGQSFEVQ 1636
SSLDRFLL+LG DDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGN+ IEV MRKGN AL+R GER+GWKRLPKK PRSGYASVYILLL+TVITSLTV+IAPRLTVESQIL+QKLSEQDNPY IIASWMR NFGEE L RLEPFLLSVTGDQGRIFAGYPD+SLVTI SKLQ+KAAWGE+RYARFAKLLQFCLS Y +KGLNM S VVG LTKVLYKAM+SLLFSFMVIWDLPNLRRG+ ALKTSRL FAYNTISPQ + FAKLVGQSFEVQ
Sbjct: 158 SSLDRFLLLLGEDDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNSAIEVCMRKGNNALKRTGERLGWKRLPKKLPRSGYASVYILLLMTVITSLTVIIAPRLTVESQILVQKLSEQDNPYTIIASWMRRNFGEEALARLEPFLLSVTGDQGRIFAGYPDSSLVTITSKLQDKAAWGEQRYARFAKLLQFCLSDYFRKGLNMCSTVVGDLTKVLYKAMVSLLFSFMVIWDLPNLRRGVTALKTSRLSFAYNTISPQVSIFAKLVGQSFEVQ 432
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A835YJQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ5_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.680e-74 Identity = 146/275 (53.09%), Postives = 181/275 (65.82%), Query Frame = 2 Query: 815 SSLDRFLLILGADDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQAT-FAKLVGQSFEVQ 1636
+++DR L +L + KKLG W+ F +++ LR FY V+LGTFV+SY+GN+ + +SM K N L R V K+ PR YA Y +LL IT+ TV+ PRL VESQ L L E +NPY +A W+R NFG + L +LEPFLLS+TG+ GR FAGY + IASKL N W ER +FAKLLQF LS YIK L SA+V LT VLYKA+LSLLFS MV+WDLP L + AL+ SRLGFAY+TI PQ F KL+GQSFEVQ
Sbjct: 84 TNVDRILQMLNSRQAKKLGVWVAFLSLVALLRSFYAVILGTFVLSYIGNSAVNLSMAKCNGLLSRSSLPV------KRLPRRLYALAYTCMLLAAITTTTVLTVPRLNVESQ-FLASLGELENPYMALADWVRQNFGLDALNKLEPFLLSITGESGRKFAGYNLDYRELIASKLSNTDPWSPERNMKFAKLLQFLLSKYIKSALTACSAIVSQLTSVLYKAVLSLLFSLMVVWDLPGLCKAGPALRRSRLGFAYDTIGPQLIKFGKLLGQSFEVQ 351
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: W7T7D1_9STRA (Uncharacterized protein family UPF0118 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7D1_9STRA) HSP 1 Score: 185 bits (469), Expect = 5.790e-47 Identity = 122/312 (39.10%), Postives = 181/312 (58.01%), Query Frame = 2 Query: 791 ASAGTGTTSSLDRFLLILGADDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAG------YPDNSLVT----------------IASKLQNKA-------AWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQAT-FAKLVGQSFEVQ 1636
AS G S++ L ++ +D +K+L W F + LR FYG++LGTFV+SY+G++ + S KGN+ +G R+ LP++F +A Y++L+L+ SLTVV PR+ E+ L L E +NPY +A +R G + ++E FLLSVTG++GR FA P +SL + +A K ++ AW R +RFAKL+++ L GYIK+ ++ ++ TK++YK +LSLLFSFM+IWDLP L RG + L SR G+AY+ ++PQ T F +LVGQSFEVQ
Sbjct: 284 ASTSPGNNSNMQVLLSMVQSDPSKRLLVWAAFLGLGWTLRSFYGIILGTFVLSYIGSSAVRWSEEKGNE----LGGRLKLPPLPRRF----WALAYVVLVLSSFVSLTVVTVPRVVGETN-YLSLLIESENPYVFVADGVRRLLGPDFSGKVEAFLLSVTGEEGRAFATGVLSATSPTSSLFSGPSASXXXXXXXXXXSVARKRLSQPLNGLPLEAWTPARSSRFAKLMEYSLKGYIKQAYFVTQKLLTSSTKLVYKGLLSLLFSFMIIWDLPRLARGTQRLARSRFGYAYSVLAPQLTAFGRLVGQSFEVQ 586
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A7S3XQP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQP3_HETAK) HSP 1 Score: 155 bits (392), Expect = 2.050e-37 Identity = 98/271 (36.16%), Postives = 151/271 (55.72%), Query Frame = 2 Query: 854 DTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKR-------LPKK-FPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTS-RLGFAYNTISPQ-ATFAKLVGQSFEVQ 1636
D KK W F +L R FYG+ LGTF +Y+GN+ ++V MR N+ L + E LP + PR YA+VY+ L +T++T+ TV + P + +ESQ ++ ++++PY ++ + + G E ++RLE FL+SV G +GR +AG D++ + + A W +ER + FAKLLQ+ G + L ++ G T L ++S LFS M+I+D PNL LK + RL + + +P+ FA LVGQSFEVQ
Sbjct: 139 DAKKSLYWAFFFALLWIARPFYGLFLGTFFFTYLGNSAVDVGMRAANRVLGVIDETNARLNALGRDPLLPLRGLPRKTYAAVYLTLFVTILTTATVFLVPNMRLESQ-YFTRIIQRESPYVVVTEALVNALGSEPVSRLEAFLVSVAGSEGRAYAGLTDDAAQRLLRDVGPGAKWTQERSSYFAKLLQYNFRGQLYSSLIFVRRLLQGSTSFLANGLVSFLFSSMIIYDYPNLSSKFSQLKENKRLAYPFKIFAPKFKAFATLVGQSFEVQ 408
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A2V3IVJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ3_9FLOR) HSP 1 Score: 141 bits (355), Expect = 7.660e-33 Identity = 89/267 (33.33%), Postives = 145/267 (54.31%), Query Frame = 2 Query: 854 DTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIE-VSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIA----SKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQAT-FAKLVGQSFEVQ 1636
D K++ +W A+ L LR F+ V+LGTF++ Y+ N+V+ VS N+A PR V+ ++T I+ +++ P + E Q + + + +NPY IA+ MR G++ T+LE ++++ G +S +++ SK + W + R R LLQ + YI + + + ++G TKV++KA+LSL+FSFM++WDLP + RG+K LKTSRL FAY ++P T F +VG+SFE Q
Sbjct: 68 DAKRVASWAALAITLYALRSFFPVILGTFILGYVTNSVVRYVSRLTANRA-----------------PRRLIVGVFYAFIVTAISGFSLMTIPTVVREGQYFISTI-QSENPYVYIANTMRKALGDDLTTKLEAYVITSVEMPEAAAKGTLPSSASSLSKPDSSKKDDSDVWTQARSRRLGILLQKSIRSYIAATITLITRLLGASTKVIFKAVLSLIFSFMIMWDLPVISRGVKRLKTSRLSFAYEELAPVVTKFGSVVGKSFEAQ 316
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A7S1ES77_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ES77_9RHOD) HSP 1 Score: 119 bits (297), Expect = 5.380e-25 Identity = 84/285 (29.47%), Postives = 150/285 (52.63%), Query Frame = 2 Query: 857 TKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLL----------SVTGDQGRIFAGYP---------DNSLVTIASKLQNKAA----W-GEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQ-ATFAKLVGQSFEVQ 1636
T+++ W LF ++S LR FY V+LGTF + YM N+++ S RK GER+ PR + + ++ I++ +++ PR E +Q L + NPY ++ +RS G+E +LE F++ S+T + + P D++ TI S+ ++++ W E+R R A++LQ G + K +++ ++ TK++ K ++SLLFSF+++WDLP ++R +++L+ S L YN ++P A F ++G+SFE Q
Sbjct: 82 TRRVLIWALFLGLVSLLRPFYPVLLGTFFLGYMSNSLVRWSARK-------FGERI---------PRRAWVLGFYASIVAFISAFSLLTIPRAFREGNDFVQSL-QSSNPYVVVTDSLRSTIGDELFEKLEYFVILSMEPGSPEGSMTENTREVLDNIPSSFPPRHGNDDATDTIVSQRISRSSADVSWRNEQRAQRLAQILQNAFRGRVLKAARLATTLLSATTKMVIKFIVSLLFSFLIMWDLPRVKRSIESLQRSSLRAVYNEVAPPLAEFVGVLGKSFEAQ 349
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: M2VTE1_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTE1_GALSU) HSP 1 Score: 117 bits (293), Expect = 1.980e-24 Identity = 82/289 (28.37%), Postives = 146/289 (50.52%), Query Frame = 2 Query: 860 KKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLS-------------------VTGDQGR---IFAGYP-------DNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQ-ATFAKLVGQSFEVQ 1636
K+L W+ L LR F+GV+ GTFV+SY+ N+ + S + ++FPR + ++++VI+S +++ PR+ E Q ++ + E NPY IA +R + G++ ++LE L+ T + R +GY D +LV + + AW EER R LLQ + ++ +++++ ++ TK+L+KA++SL+FSF+++WDLP + RG+ +LK S++G A+ ++P F + G+SFE Q
Sbjct: 91 KRLLIWLGATTSLWYLRPFFGVLFGTFVLSYVANSFVSWSQKISK----------------QRFPRRWAVLFFYAMIISVISSFSLLTVPRVIKEGQYFIRTI-ESANPYVFIADSIRKSVGDDLSSKLESLLIGPSELFSNELEKPLYSSEEEATTESKRDKKAVSGYKKAGAILNDKALVEKKLSVSSTDAWTEERSRRLGILLQKSVKHHVAAAVSLTTKILRESTKILFKALVSLVFSFLIVWDLPKIARGVGSLKRSKIGPAFMEVAPHIGEFGVIFGKSFEAQ 362
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: I0YQJ9_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQJ9_COCSC) HSP 1 Score: 103 bits (257), Expect = 9.310e-20 Identity = 73/259 (28.19%), Postives = 132/259 (50.97%), Query Frame = 2 Query: 863 KLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQ-ATFAKLVGQSFEVQ 1636
++G W++ A + +L+ F+G+ +GTFV+S++GN + + R +P R +Y +++ +T V+ P + E+ + +L + D+ + ++ +R G+ + +LE FLL +GD+ G P L I + +W ER A +LQ L GY + ++ +S++VG +SL+ SFMV+WDLP + RG+ +L+TSRL YN ++P A F +L G++ + Q
Sbjct: 124 RVGVWVVVAWFMYQLKDFFGIAMGTFVLSFIGNGFVRSAQRTMPFPAT----------IPVGMRRKFLVLLYFTAIVSCVTLFGVMTIPDIIREAADFVSRL-QSDSIWVVVLEKLRQGLGDGMMEQLERFLLVASGDE---LTGAPH--LRAIGTNGAQWHSWTAERTAYLGLVLQKMLRGYTEAAVSFTSSLVG----------VSLVLSFMVVWDLPTISRGVSSLQTSRLAPIYNEVAPSVAVFGQLFGKALQAQ 356
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A250XBB3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XBB3_9CHLO) HSP 1 Score: 103 bits (256), Expect = 1.550e-19 Identity = 70/284 (24.65%), Postives = 137/284 (48.24%), Query Frame = 2 Query: 812 TSSLDRFLLILGADDTKKLGA--------WMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLLSVTGDQGRIFAGYPDNSLVTIASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQAT-FAKLVGQSFEVQ 1636
TS D + LG D K + A W +V+ +L F+G+++GTF++S++GN++++ + LP R A +Y +L +T L VV P + E +++L + DN + ++ MR G++ + +E + + +N + +A+ + W ER A + L Y ++++++ +TK+ + M+SL+ FM++WD+P++++G+ L +SRL YN ++P T F +L G++ +VQ
Sbjct: 132 TSDWDSNQMALGGDLPKLIQAIPFRRVAIWGAVGIVMFQLSEFFGLVMGTFIISFIGNSLVDSAAGSSGPLAV----------LPPPARRRALALLYFAGILATVTLLVVVTVPGIAAEGADFVKRL-QSDNIWVVLVEKMRKGLGDQVMDSIEKAIYLAS-----------NNDITAVAAN--DPGTWTSERIASLGLAISSTLKAYTTTAAKITASMLSSVTKLAVQTMVSLVLGFMLVWDMPSIKQGVSTLGSSRLAPVYNEVAPVLTVFGRLFGKALKVQ 391
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Match: A0A7J7IJS3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJS3_9RHOD) HSP 1 Score: 102 bits (253), Expect = 3.120e-19 Identity = 87/310 (28.06%), Postives = 141/310 (45.48%), Query Frame = 2 Query: 839 ILGADDTKKLGAWMLFALVLSRLRYFYGVMLGTFVMSYMGNTVIEVSMRKGNKALQRMGERVGWKRLPKKFPRSGYASVYILLLLTVITSLTVVIAPRLTVESQILLQKLSEQDNPYAIIASWMRSNFGEETLTRLEPFLL------------------------------SVTGDQGRIFAGYP----------DNSLVT---IASKLQNKAAWGEERYARFAKLLQFCLSGYIKKGLNMSSAVVGGLTKVLYKAMLSLLFSFMVIWDLPNLRRGMKALKTSRLGFAYNTISPQ-ATFAKLVGQSFEVQ 1636
I+ K++ W F+ ++ R F GV+ GTFV+SY+G + + G + L+R G V PR +Y + IT+++++ PR+ E Q + + NPY IA MR G+E ++E +L SV QG + P DN + I+S W EER R ++Q LS Y+ + ++ S ++ TK++ K +LSL+FSF+++WDLP++ G ++L+ SRL AY ++P F L+G+SFE Q
Sbjct: 81 IVSQLPVKRILIWAAFSWLVYLCRPFTGVLFGTFVVSYVGVSFCQW----GARFLRRFGVDV---------PRRVIVGIYYSGIALFITTMSLLTIPRIIKEGQYFVG-IIRSSNPYVWIADTMRRALGDELSAKVEALVLTEGYAEPADADGGSSAAPNSATASPETPDASVGTSQGVVRVRVPSMESRSDTRSDNFSIPGNGISSAAAAPTQWTEERSRRLGLVIQKSLSRYVNRFASIVSRILSNSTKIIVKVLLSLVFSFLIVWDLPSVAAGFRSLRRSRLRAAYLELAPAIGEFCTLLGRSFEAQ 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig101.125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig101.125.1 >prot_H-canaliculatus_F_contig101.125.1 ID=prot_H-canaliculatus_F_contig101.125.1|Name=mRNA_H-canaliculatus_F_contig101.125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=433bp MHDNHAEMVWRNLAGSPYRSLALQAHGVGGVGGVGETGGRTSSPGQGAASback to top mRNA from alignment at H-canaliculatus_F_contig101:232..7260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig101.125.1 ID=mRNA_H-canaliculatus_F_contig101.125.1|Name=mRNA_H-canaliculatus_F_contig101.125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7029bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:232..7260- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig101:232..7260- >mRNA_H-canaliculatus_F_contig101.125.1 ID=mRNA_H-canaliculatus_F_contig101.125.1|Name=mRNA_H-canaliculatus_F_contig101.125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2598bp|location=Sequence derived from alignment at H-canaliculatus_F_contig101:232..7260- (Hapterophycus canaliculatus Oshoro5f female)back to top |