mRNA_H-canaliculatus_F_contig1008.110.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1008.110.1
Unique NamemRNA_H-canaliculatus_F_contig1008.110.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.250e-104
Identity = 151/213 (70.89%), Postives = 182/213 (85.45%), Query Frame = 2
Query:  719 FRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            ++ PI RLVSAYFYCKQ GWDELCASM++KAG+ DLHTFA+HWGNY +RQF+LAFVGA++VF+AEQ+RGI GRPVMFPGWYRVKEYFE      + R+ ++ +GA NDLAM  LLQPVEDLLS NYSAVG+LE+WE SMTLFN+ALKVP+F+W++AS++LGRKNVD RL  EEA ALR+AWDDP +   LWLDI LY+HAV+VHN+QV  HGI
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.360e-67
Identity = 132/301 (43.85%), Postives = 184/301 (61.13%), Query Frame = 2
Query:  509 KAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKD--QTDKGAETRKHTITFGAYTEALRSRRG---QDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGS--IDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMF------PGWYRVKEYFEGLEGTAEARSFLRG-----SGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            KAGG+TVK ++    + +  T+G Y +  W+  KD  Q   G E    ++ +GAYTE LR   G   ++CKWFT+FRHPI RLVSAYFYCK++  D LCA++ + A +   DL+ FAEHWG++ +RQFALAFV  +E+ + +     +G    +      PGWY +K Y +      E     RG     + A     +  LLQPV++LL++ Y+AVGVLEQWE S+ LFN AL +P FDW     S+G+KN D     EEA+ L  +W DP +  +L LD+LLY++AVSVHNQQV  +G+
Sbjct:    3 KAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDEN---SLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 2.330e-65
Identity = 121/300 (40.33%), Postives = 172/300 (57.33%), Query Frame = 2
Query:  482 ECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAE-------QDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVD-YRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            +CW+F+H+ K+GG TV+ +I   + +K  +   + +  W   +   +   +      T+G YTE LR    +DCKWFT+FRHP+SR+VSAYFYC++   D+LCA++++ A  +DL TFAEHWGNY +RQFALA + A++VF  E       Q RG     V  P WYR K Y            F   +   + LA    L   ++ LS  Y+AVG++E+W+ SM LFNR L +  FDW    +  G+KN    +       AL++AW  P +   +WLDILLY+HA+SVH  QVA  GI
Sbjct:   51 DCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENA-VFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGD--VCIPAWYRQKHYLH----LPHQDDFCGPTQPESGLAQ--FLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 9.990e-63
Identity = 119/307 (38.76%), Postives = 176/307 (57.33%), Query Frame = 2
Query:  452 TVRALSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARND---LAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIKL 1363
            T+  LS +   CW+FTH  KAGGTTVK  +++    +  T+    +  W    D+  +     K  +  G Y E LR+   Q CKWFTM RHPI+RL+SA++YC     D+LCA+ I K    D++ FA+HWGNYA+ QFAL  V   E+F+ E D          P W++ K YFEG  G     S        ++   + +  +LQPVE+LL  NY+AVG+LE W+ SM LF+ AL++P F+W  AS SL  +    ++ +++A  L +A  DP +  ++WLD+LLY +A S+H +Q+  + + L
Sbjct:   26 TLPELSLSTPTCWVFTHNNKAGGTTVKTHLRNYAESRNETVAL-CHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVDA---------PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAM-LAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLAL 321          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 2.600e-61
Identity = 125/306 (40.85%), Postives = 181/306 (59.15%), Query Frame = 2
Query:  464 LSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAET---RKHTITFGAYTEALRSRRGQ-DCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARN---DLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNV-DYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            LS +P  CW++T + KAGGT+++ +I+       +T+G +T+  +    +  D+G +    R+ ++ +GAYTE LR       CKWFTM RHPI+RLVSA+ YC     D+LCA+ I K    D++ FAEHWGN+ V QFALAF   +++   E         V  P WY+ K YFEG  G +   S       ++   ++ M  +LQPVE+LL   Y+AVG+LEQWE SM LF+ AL++P F+W S S S   +NV D + + +    L ++  DP +   LWLDILLY HA SVH  Q++ +G+
Sbjct:   30 LSLSPPACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQY----NAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE---------VKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND---LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 8.410e-61
Identity = 125/318 (39.31%), Postives = 182/318 (57.23%), Query Frame = 2
Query:  455 VRALSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTD----KGAETRKHTITFGAYTEALRSRRGQD--CKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFV---GADEVFSAEQDRGISGRPVM-FPGWYRVKEYFE-------GLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            VRAL+S P +CW+F HL K GG+TVK +++ S     S    Y ++ W    D +     K A      +  G YTEALR     D  C++FT+FRHPI+R+VSAYFYC+    D  CAS +V A  +DL TFA+HWGN+AVRQFAL FV   G  E     + + +    +    GWY++K Y E       G+ G +EA +    + A  +  +  LLQP  DL+   Y AVG+LEQW  ++ LF+ AL++P   W +     G++ VDY+ ++ E++ L+ AW D  +  ++ LD+LLY HAV V ++Q   +G+
Sbjct:  147 VRALAS-PDQCWVFMHLQKCGGSTVKYMLRRSYG---SRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 6.230e-59
Identity = 124/309 (40.13%), Postives = 173/309 (55.99%), Query Frame = 2
Query:  485 CWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKH----TITFGAYTEALRSRRG-------QDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEV--FSAEQD----RGISGRPV-MFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            CWIF HL KAGGTTVK L+  S   + +T   Y ++ W + +   +  A +       +   G Y EALR             C+WFT+FRHP+SRLVSAY+YC++   D+LCAS  V + ++DL TFA HWGN+A+RQFAL FV  D+V  F    +     G++   V + PGWY +K +     G A+  S     G R    +  + +PV DLL  NY+ VG+LE W  +++LF+ AL +P   WR   +  G+ NVD R + E+   L+ A  DP I  HL LD+ LY  AV + NQQ  ++GI
Sbjct:   88 CWIFNHLQKAGGTTVKRLLFDSWGSESTT---YDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTS---PEGTR----LEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 4.080e-56
Identity = 119/309 (38.51%), Postives = 172/309 (55.66%), Query Frame = 2
Query:  470 SAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDK-GAETR---KHTITFGAYTEALRSRR--GQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFSAEQDRGISGRPVMFPGWYRVKEYFE-------GLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGI 1357
            ++P +CW+F HL K GG+TVK L++       S    Y +  W    + + K GA+     K  +  G YTEALR     G  C++FT+FRHPI+R+VSAYFYC+    D  CAS +++A  +DL TFA+HWGN+A+RQFAL FV +D+V                   Y++K Y E       G+ G  EA +  + + A  D  +  LLQP  DL+   Y AVG+LEQW  ++ LF+  L +P  +W       G+ +VD   +Q E + L+ AW D  +  ++ LD+LLY HAV V +QQ  +HG+
Sbjct:  172 ASPGQCWVFMHLQKCGGSTVKDLLEDRWG---SRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-----------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.360e-35
Identity = 102/299 (34.11%), Postives = 150/299 (50.17%), Query Frame = 2
Query:  485 CWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYTNHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFS-AEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQE------EAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIK 1360
            CWIF H+ K+G +  + +     RK       +    W R  D            +  G   E+LR+ + + CKW T+FRHPI+RL+SAY +C +   D +C        S  L  FAE WGN+A+RQFAL  V    V   A Q +  +G  +    WY VKEY             L   G   D  + S+L+PV+ LLS  Y+AVG+ ++ E +M LF++AL +   DW S+  +LG   ++  ++Q+      E++  R A ++P I   L LD+ LY HA+ V   QVA  GI+
Sbjct:  273 CWIFMHMDKSGASGARRVATERWRKDELV---FDTVQWRRG-DGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM----WYLVKEY-------------LARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLG---INEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543          
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 3.890e-35
Identity = 92/241 (38.17%), Postives = 129/241 (53.53%), Query Frame = 2
Query:  650 ITFGAYTEALRSRRGQDCKWFTMFRHPISRLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFVGADEVFS-AEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGARNDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSASKSLGRKNVDYRLRQ---EEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQQVATHGIK 1360
            +  G   E+LR+ +G+ CKW T+FRHPI+RL+SAY +C     D +C        S  L  FAE WGN+A+RQFALA V    V   A Q +  +G  +    WY VKEY             L   G   D  + S L+PV+ LLS  Y+AVG+ ++ + +M LF++AL +   DW S+  +LG    D +  +    E++  R A ++P I   L LD+ LY HAV V   QVA  GI+
Sbjct:   46 LLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM----WYLVKEY-------------LARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1008.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5L061_9PHAE1.250e-10470.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI1.360e-6743.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE2.330e-6540.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE9.990e-6338.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE2.600e-6140.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI8.410e-6139.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI6.230e-5940.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI4.080e-5638.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQM0_9PHAE3.360e-3534.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI3.890e-3538.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1008contigH-canaliculatus_F_contig1008:15312..19093 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue5.3e-57
Seed eggNOG ortholog2880.D7FWQ3
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size2150
Cds size1080
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1008.110.1prot_H-canaliculatus_F_contig1008.110.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1008 16779..18309 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928635.7531388-UTR-H-canaliculatus_F_contig1008:15311..153991622928635.7531388-UTR-H-canaliculatus_F_contig1008:15311..15399Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 15312..15399 +
1696845506.049059-UTR-H-canaliculatus_F_contig1008:15311..153991696845506.049059-UTR-H-canaliculatus_F_contig1008:15311..15399Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 15312..15399 +
1622928635.7678845-UTR-H-canaliculatus_F_contig1008:16580..167781622928635.7678845-UTR-H-canaliculatus_F_contig1008:16580..16778Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 16581..16778 +
1696845506.0592911-UTR-H-canaliculatus_F_contig1008:16580..167781696845506.0592911-UTR-H-canaliculatus_F_contig1008:16580..16778Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 16581..16778 +
1622928635.8125968-UTR-H-canaliculatus_F_contig1008:18309..190931622928635.8125968-UTR-H-canaliculatus_F_contig1008:18309..19093Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 18310..19093 +
1696845506.087566-UTR-H-canaliculatus_F_contig1008:18309..190931696845506.087566-UTR-H-canaliculatus_F_contig1008:18309..19093Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1008 18310..19093 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928635.7797964-CDS-H-canaliculatus_F_contig1008:16778..172181622928635.7797964-CDS-H-canaliculatus_F_contig1008:16778..17218Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1008 16779..17218 +
1696845506.0683143-CDS-H-canaliculatus_F_contig1008:16778..172181696845506.0683143-CDS-H-canaliculatus_F_contig1008:16778..17218Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1008 16779..17218 +
1622928635.7922118-CDS-H-canaliculatus_F_contig1008:17669..183091622928635.7922118-CDS-H-canaliculatus_F_contig1008:17669..18309Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1008 17670..18309 +
1696845506.0788207-CDS-H-canaliculatus_F_contig1008:17669..183091696845506.0788207-CDS-H-canaliculatus_F_contig1008:17669..18309Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1008 17670..18309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1008.110.1

>prot_H-canaliculatus_F_contig1008.110.1 ID=prot_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=360bp
MVGNPRSIMVHRGWARRLLCAGVGLFFATGSLESSGSCTSCNRSVSFANA
LATNTTVRALSSAPKECWIFTHLLKAGGTTVKGLIQSSMRKKRSTLGYYT
NHHWMREKDQTDKGAETRKHTITFGAYTEALRSRRGQDCKWFTMFRHPIS
RLVSAYFYCKQQGWDELCASMIVKAGSIDLHTFAEHWGNYAVRQFALAFV
GADEVFSAEQDRGISGRPVMFPGWYRVKEYFEGLEGTAEARSFLRGSGAR
NDLAMRSLLQPVEDLLSHNYSAVGVLEQWEESMTLFNRALKVPNFDWRSA
SKSLGRKNVDYRLRQEEAQALRSAWDDPFINDHLWLDILLYNHAVSVHNQ
QVATHGIKL*
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mRNA from alignment at H-canaliculatus_F_contig1008:15312..19093+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1008.110.1 ID=mRNA_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3782bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1008:15312..19093+ (Hapterophycus canaliculatus Oshoro5f female)
AGATTGGATACGTCATCGTATCTTTCGCCACGTGGCTACAGTACAGCGGC GAGAAAAGCAAAGCAGCGGTGGCGCTTCCTACAGCGAGGTGGGCGGGGCG AGGTGTCGGGCATAGCGACAGTGTCACACATAGCTTGTGTATTCGTCCCG TCATCCAATTGCCCTAATCTTGTATTACCCTCCCTTGTTTCGTGCTCGAC GAACTTGCTGTACAATTGTTTGCGAATACGCTTATACTGCTGTACGTCGA AATGGAAATCACCATGTTGTCAATCCGCAGGCTGCATGAGGGTCTTATTC AATCTCGTGCAGCTTTACATGCTGCGTTTGAGATAGAGTAGGCTACGCCC CGAAAGATTATGGGAATTGTTGAACATCAGAAATTCGAGGAAGTTGACAT ACGAGTACTGCTGTGTAGTCTAGGGGAGAAGGCATGCATGCGAATCCGTT TCTGAGCTGTTGCAATCTACCGCTGTAGGTTTCGCTTTTCGTGCGCGGGA AAGGTGATAGGCTTATACAACCACCTGCCGTCAGAAGCAATATTCAGCAA AGTCGCAGAGAGAATCGACCGCACAAATCCATGTGGCATCCATGATACTC CGTAGTAAACAATTTTGTCTCAGTGAACGGCCGAACGGCATGTGCATCCG CTATCGATCGACCAAAAATGCTTGTTGTCTGGTCTCCCTCCTGGCCACAA GTAGGTGCGATTGCCTTCTGATGATAACATACGTGTACCCGGACGCAAGT ATGGAGTGCATACGCAGCATCTTGGAGAAAACTTGACTTTTGTTCTGATT GTTTTTGTGACAGACTCGAAAACACGACCAAACGAATACCTCGGCTGAGA GATAATAAAAGCGACCCAGGAGATTTTTTGTTGAATTCCTTACAGAGTAG TGAGCGTTTTTTCTTTCGGACAGCATGTGCCTGCAGGTACGTACACGGTT GGGTGTAGGTGCGCATACACGTCGCGGTGTATAGTCTCTGTACAACTGAC ACAAACAAGTACATTAAGTGGGTTTGACTTTTCGGACGACAAGCAAGTAT TGATAGTAGCCGGGTGTTCACATATTAAACGTCGTTGGAGTCAGTGCATA GGGAAGCATGTTGACCTTCAAGACACGTGTTTCGTCGATACCTTTGGCCA GCAATTGAAAACCAAACATACCGCTCGAGGTAAACTCGAAATGTATCCAA AGATGCTCCATGGCAAATAATCTACACGCAGCACCGCCCCATGACATGTA TATATGAACGTGTGTTCAGTTGTTGTCCCTGTCAGAACGCTGACTAAATA CATGGCTCTCCGCGGTAGGACGCTGCTGGAGACGGAGCGTTGGGCAGTGT TTCTCGGACCAAGGGATTGCATCCCGTACCCCGACAAGTGTGCATTGGTT TTATGGGCGATTTGTGAGCAGACTGTGGCGGTTGACAACCCTGCTTTTGA CGTGTCCTGTTGTCTCGATGGTAGGGAATCCAAGATCGATCATGGTCCAC CGGGGATGGGCGAGGAGGCTGCTGTGCGCGGGGGTAGGGCTCTTCTTCGC GACCGGTTCACTTGAGTCCAGCGGCTCTTGCACAAGCTGCAATCGTAGTG TCAGCTTTGCAAATGCTTTAGCTACAAACACCACCGTTCGAGCCCTTTCC TCGGCTCCAAAGGAATGTTGGATATTCACCCATCTTCTCAAGGCAGGGGG CACGACGGTCAAGGGACTAATTCAATCGTCAATGAGAAAGAAGCGTTCCA CCTTAGGGTATTACACAAACCACCATTGGATGAGAGAGAAAGACCAGACG GACAAGGGCGCCGAGACGAGGAAGCACACCATCACGTTTGGTGCATACAC GGAAGCACTTCGCTCTCGCCGGGGTCAAGACTGCAAGTGGTTCACCATGT TTCGGCAGTGAGTGGATGTTTTCGATCATGAGCTCATCACGTACCTGTTT TCCAGCCCGCCTGTTTCCTACATTCGTGTTTCACCATCCAGAACCGTTCT AGCGCGAGAAACGTCGAGCAGGTATCTTCCGCGAATTAGGACCGCATTGG TCGAGTACGTCACATGCATGGTAGCAACGCATCGGACGGCACGATTTCGA GTGTTGTACCGCTGCTCGTTCCCATATTTCCCTTGATGATGGTCATGCCT GGTAGAGGGACCATCCTCAGGAAAGCGTAGACACCGCGCTGGCGCTGCAC GAAAAAAACAAAACGACGGTAAACAATTAGGTGAGTTAGTTGAGGTTGCA CCGTCTTCACTTCGTGAGGCAGACCAACGGGGTCAAGTACCCAATTTCAG ACCTTCTCGCGTGCTTTCACGTGCCTGCCTCTCCCTGAACGTTACACTTC GCGTTCAGTCCGATTTCGCGACTTGTGAGCGCCTACTTCTACTGTAAACA ACAAGGTTGGGACGAGCTTTGCGCGAGCATGATAGTGAAGGCAGGGAGCA TTGATCTACATACTTTCGCTGAGCACTGGGGCAACTACGCTGTGCGACAA TTCGCACTGGCGTTTGTCGGAGCTGATGAGGTGTTTTCCGCTGAGCAGGA TCGAGGGATATCGGGACGCCCGGTAATGTTTCCAGGCTGGTATAGGGTGA AGGAGTACTTTGAAGGTCTGGAAGGAACGGCAGAAGCGAGATCTTTTCTG CGCGGGTCTGGGGCACGAAACGACCTCGCCATGCGTAGTCTGCTCCAACC GGTCGAAGACTTGCTGAGCCACAATTATTCCGCGGTGGGAGTACTGGAGC AGTGGGAAGAAAGCATGACCTTGTTCAACAGGGCTCTCAAGGTACCCAAC TTTGACTGGCGTAGTGCTTCCAAGAGTCTGGGACGAAAGAATGTCGACTA CAGACTTCGGCAGGAAGAGGCCCAGGCACTACGTTCTGCATGGGATGATC CGTTTATCAACGACCATCTGTGGCTCGATATTCTCCTTTACAACCACGCC GTCAGCGTCCACAACCAGCAAGTCGCTACTCATGGAATCAAATTGTAGCT CGGGAGTCGTCCCGGCAGGCACGCAGGTAGCACCCTACTCATCTCTTCAG GCCCTGGAGAGCTGCTTTGTGCACACCTGAGTGTTCGAAGATATACGTAT CAACCACGATCCGTGGAGTTGGAAATGATCAAAGTTCCACCTTCCTCTTA GGAGACTATCAAGGAATCAAAACATGGCCCTCTTGGGTGGCTTCACTCTT CGGCGGCTTCGTGTTGTTGGGTGAGATCACGTTCAGGTTCCCTTTTGGCG GAAAATATGTACATAATGACGAAGGAAGTTGGCGAATGAGCGACGTCACA AACTAGATTAGGAACACAAATATACTTGGAAACTGTCTGCCCGTTCTTGA AAGCATTCCGTCGATGTTCTGCCTGCAAGTAAAACGCGACAAAATGCTCA ACTACGCAAAACGTCGCTTCCATGCTTGCGGTAGCAGACATACAGTTTTA GACGAGTTTTGTGTCAGGGATGCACCGGTCCGGCATCCAGAGAGGCAGGT GACTGTCGTATGCTGGCCGAAATTAGCACACAGGATCTTGGGGAATTGAC GTGCCTGCGTGATTTTGTATCAACCAGGACGTTGGCGTGTGGTCCTTTCA CGTTGATGGGAATGAGAAGAGACGCGACACAACCCGGGGAGAGCACCTTC TTAAAGCGGATCCCCACAGGCTTTCGGATCCCCGCTACAAGTCACCACCT ATGCTGGTAAAGTAAACCCCAGTGTACCGAGAAGCGGAGCGGTTAGGGCC AAGAAGCCCTCTCGACATTTGTTCGTCCAGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1008:15312..19093+

>mRNA_H-canaliculatus_F_contig1008.110.1 ID=mRNA_H-canaliculatus_F_contig1008.110.1|Name=mRNA_H-canaliculatus_F_contig1008.110.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2160bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1008:15312..19093+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTAGGGAATCCAAGATCGATCATGGTCCACCGGGGATGGGCGAGGAG
GCTGCTGTGCGCGGGGGTAGGGCTCTTCTTCGCGACCGGTTCACTTGAGT
CCAGCGGCTCTTGCACAAGCTGCAATCGTAGTGTCAGCTTTGCAAATGCT
TTAGCTACAAACACCACCGTTCGAGCCCTTTCCTCGGCTCCAAAGGAATG
TTGGATATTCACCCATCTTCTCAAGGCAGGGGGCACGACGGTCAAGGGAC
TAATTCAATCGTCAATGAGAAAGAAGCGTTCCACCTTAGGGTATTACACA
AACCACCATTGGATGAGAGAGAAAGACCAGACGGACAAGGGCGCCGAGAC
GAGGAAGCACACCATCACGTTTGGTGCATACACGGAAGCACTTCGCTCTC
GCCGGGGTCAAGACTGCAAGTGGTTCACCATGTTTCGGCAATGGTAGGGA
ATCCAAGATCGATCATGGTCCACCGGGGATGGGCGAGGAGGCTGCTGTGC
GCGGGGGTAGGGCTCTTCTTCGCGACCGGTTCACTTGAGTCCAGCGGCTC
TTGCACAAGCTGCAATCGTAGTGTCAGCTTTGCAAATGCTTTAGCTACAA
ACACCACCGTTCGAGCCCTTTCCTCGGCTCCAAAGGAATGTTGGATATTC
ACCCATCTTCTCAAGGCAGGGGGCACGACGGTCAAGGGACTAATTCAATC
GTCAATGAGAAAGAAGCGTTCCACCTTAGGGTATTACACAAACCACCATT
GGATGAGAGAGAAAGACCAGACGGACAAGGGCGCCGAGACGAGGAAGCAC
ACCATCACGTTTGGTGCATACACGGAAGCACTTCGCTCTCGCCGGGGTCA
AGACTGCAAGTGGTTCACCATGTTTCGGCATCCGATTTCGCGACTTGTGA
GCGCCTACTTCTACTGTAAACAACAAGGTTGGGACGAGCTTTGCGCGAGC
ATGATAGTGAAGGCAGGGAGCATTGATCTACATACTTTCGCTGAGCACTG
GGGCAACTACGCTGTGCGACAATTCGCACTGGCGTTTGTCGGAGCTGATG
AGGTGTTTTCCGCTGAGCAGGATCGAGGGATATCGGGACGCCCGGTAATG
TTTCCAGGCTGGTATAGGGTGAAGGAGTACTTTGAAGGTCTGGAAGGAAC
GGCAGAAGCGAGATCTTTTCTGCGCGGGTCTGGGGCACGAAACGACCTCG
CCATGCGTAGTCTGCTCCAACCGGTCGAAGACTTGCTGAGCCACAATTAT
TCCGCGGTGGGAGTACTGGAGCAGTGGGAAGAAAGCATGACCTTGTTCAA
CAGGGCTCTCAAGGTACCCAACTTTGACTGGCGTAGTGCTTCCAAGAGTC
TGGGACGAAAGAATGTCGACTACAGACTTCGGCAGGAAGAGGCCCAGGCA
CTACGTTCTGCATGGGATGATCCGTTTATCAACGACCATCTGTGGCTCGA
TATTCTCCTTTACAACCACGCCGTCAGCGTCCACAACCAGCAAGTCGCTA
CTCATGGAATCAAATTGTAGTCCGATTTCGCGACTTGTGAGCGCCTACTT
CTACTGTAAACAACAAGGTTGGGACGAGCTTTGCGCGAGCATGATAGTGA
AGGCAGGGAGCATTGATCTACATACTTTCGCTGAGCACTGGGGCAACTAC
GCTGTGCGACAATTCGCACTGGCGTTTGTCGGAGCTGATGAGGTGTTTTC
CGCTGAGCAGGATCGAGGGATATCGGGACGCCCGGTAATGTTTCCAGGCT
GGTATAGGGTGAAGGAGTACTTTGAAGGTCTGGAAGGAACGGCAGAAGCG
AGATCTTTTCTGCGCGGGTCTGGGGCACGAAACGACCTCGCCATGCGTAG
TCTGCTCCAACCGGTCGAAGACTTGCTGAGCCACAATTATTCCGCGGTGG
GAGTACTGGAGCAGTGGGAAGAAAGCATGACCTTGTTCAACAGGGCTCTC
AAGGTACCCAACTTTGACTGGCGTAGTGCTTCCAAGAGTCTGGGACGAAA
GAATGTCGACTACAGACTTCGGCAGGAAGAGGCCCAGGCACTACGTTCTG
CATGGGATGATCCGTTTATCAACGACCATCTGTGGCTCGATATTCTCCTT
TACAACCACGCCGTCAGCGTCCACAACCAGCAAGTCGCTACTCATGGAAT
CAAATTGTAG
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