Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 273 |
| Cds size | 270 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928634.0288315-CDS-H-canaliculatus_F_contig1006:10413..10439 | 1622928634.0288315-CDS-H-canaliculatus_F_contig1006:10413..10439 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 10414..10439 - |
| 1696845505.1464643-CDS-H-canaliculatus_F_contig1006:10413..10439 | 1696845505.1464643-CDS-H-canaliculatus_F_contig1006:10413..10439 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 10414..10439 - |
| 1622928634.0412395-CDS-H-canaliculatus_F_contig1006:10994..11096 | 1622928634.0412395-CDS-H-canaliculatus_F_contig1006:10994..11096 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 10995..11096 - |
| 1696845505.1595764-CDS-H-canaliculatus_F_contig1006:10994..11096 | 1696845505.1595764-CDS-H-canaliculatus_F_contig1006:10994..11096 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 10995..11096 - |
| 1622928634.0564125-CDS-H-canaliculatus_F_contig1006:14062..14204 | 1622928634.0564125-CDS-H-canaliculatus_F_contig1006:14062..14204 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 14063..14204 - |
| 1696845505.171754-CDS-H-canaliculatus_F_contig1006:14062..14204 | 1696845505.171754-CDS-H-canaliculatus_F_contig1006:14062..14204 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 14063..14204 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1006.92.1 >prot_H-canaliculatus_F_contig1006.92.1 ID=prot_H-canaliculatus_F_contig1006.92.1|Name=mRNA_H-canaliculatus_F_contig1006.92.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=90bp
GPEQNPKQTCTKIEKKDTRRTKNRGCGEGERQQLQGGRTKVVGAHPRGGM
SATRRARTDVGGFGASGASEWAAVPGAIVETGLSGSRCVD back to topmRNA from alignment at H-canaliculatus_F_contig1006:10412..14204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1006.92.1 ID=mRNA_H-canaliculatus_F_contig1006.92.1|Name=mRNA_H-canaliculatus_F_contig1006.92.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3793bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1006:10412..14204- (Hapterophycus canaliculatus Oshoro5f female)
GGGCCCGAACAAAACCCAAAGCAAACTTGCACCAAAATAGAGAAGAAGGA
CACCAGAAGGACGAAGAATAGAGGCTGTGGAGAAGGCGAGCGTCAGCAAC
TCCAGGGAGGAAGAACGAAGGTGGTCGGCGCACACCCAAGAGGTGAGAGC
AGGGTCCGGTTGTGAATCAATCCTCAATCGTCTCGGCCCCTCTCGCAAAA
ATGTTCCCGCAAACCTGTAACATGAGAGCGTACCCCGGGGAGAGCAACTT
CTCGTACCCTACCCGTCACCCACAGCGGTGGAAACTTGGATGCTTTTCGC
ATGCTGCGCAAAACGTCACGTTCCCTGCCTCAAATCCCTGGCAACTTGGG
TGCGACCTCCCAAATACGCCCACAAAATCTCCAGGCGACTTTCCCAAGTT
GTGTAAGACTTCCCGTTCTGCCGTAGTTTTAGAAAGACTTTCCGAACTGG
CTCTCCGAACTGAATCCAAACTGAACCAAAATATTTGGTTACAATGTACT
TGAGGTGGCTTTCCGTGTCCTCTCCAACTAGCAACGCGTTGGGAAGTTTG
CGTTTGGTGCGACACCCATTCCGCACACAAAAATCCGGTGCCTTTGGTAC
TGCTTTCACACCCTCCCCTGAGTAGAGCATGGAGATAGCTGCCGGAGCGT
ATGGGTCTGCCGCGAGGAACACGGGCAGGCAGTTGCAACGACCCGGGGGC
GGTTGTGCTGTACTTTTCGAACACCGGGGGTGGTTGTTGGTTGTCAACGA
CCCGAGGACAATAGAAGTGCAGCAACAACACGACGGCAGGGTAGGGTACG
CAGGAAAGGCAGGGTAGCTAATCACCCGCAGTCTCTCGGTAGGTTTGCTG
GTCGCATGTGTGTGTGCCCATGTTTGCATGTGCTTGGGCGCACAAGTACG
CTGTACGCACACGTACGTCATCCTCCCTCCCTAGGGACACAACGAAGCAG
TACGTACATACTTGCACTTGCACTTGAAGAGATTCTTCCGATGGCCCTTG
CTGGTGCAACTTGTTGCGTCACGGTCTACGATCGATCTCAACTCACAACA
GCAGTCCCTTATATTGTGCCTTCGGTGCCAAGGTAACTCTGGGAGTAATC
GAACAGCCGCACGTGTTTCGTGGCACCAGTTGGTCTTTTATCGTACACGA
ATAAGAGATCCATACTGCATCCCTTCAATTTATCTTCAGCCTGCTAGACA
GCGTCCGAGCCATCTCCCCGACTTCTTTTTTTTATCTTGCCTTGGGATGT
TGGCGATTGTGTTCGGTGGCCCATGTTTCTAGTCATCTTCATGTTTTCTA
TTCTGTGTCACGTGTGACTGTTGTGTTGTGTGCGAGTTGTCTGGGTCCGT
TTTCCTTCTCTTGTTCGCCCGACGTGGGACATGCCTTTGTTTCTTTTTTT
TCGGTGGGTTGCTTGTGACAACCGAACAACGTCTCCTGAGCTAGACTTTT
CAAGACGAAAACGACAGCAACAACAAACCATGAACAAACATACTCGGTTG
TGTACCCGGCCCAGCGGTCCGGCAAGTTCCGGCAACATCCCGTCCATTGT
TGTACTGAAAACTCGGTATTTTGGGTTCGTACGATTTTCCGGACCCTTAA
CAATGTAGTCCTTCGTAAGTGCGTGTACCTTGTACTTCAATATTTTCACC
CCAACAGAAACCTTCCGTGGTGCCCCGGAAGACGGCAAAACCACAGCAGC
ACTCCTGCGGATGAAACGTCGATGTTTTGCCAGTTGTGGCTGAGATGAGT
ATTACACGTGGACAGATAAGGCAACAGAGAAGACAAGGACCTTGAGACCG
GGAGACTTTTTGTGTTTTATGTTTTTCTTTTATCAGAGGAGAACCCGCCA
TGCCGACAAGCCCCTGAAGCACAGCAACAGTATGTATGGCAGGCTGGGTG
ACGCGCCGTGCGGCGTTTTGTCCACAATTTCTTCAAAGGTGGTCGCAGAC
AGAACGTGGGCCGTTTTGGCATGGAATCGTAGCTGCTGGGCTGACGCCTA
GTCCGTCCTTTGCTCTCTCCGCACCGCACCGACCCTTGGTGCACAATAAA
AAATAGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAAGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAA
ACAGAGAGAGAGAGAGAAAGACAGAGTGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGGGAGAGAGCGGGCAGGCGAGCGTCAGGGATGCACGACA
CTGCTGTGTGGTGCTGCGCTGTGCTGTGCTGTGAAATTCGTGTGTCGCTG
AACATGGGCGCCCATAACAAGGCTGCGCAGCACCCCGCCTGCCCCCCATC
ATTTCAGCCGCTGACAGCACTTAAGAACAACACTGCTCCTGCGCGCTCAC
ATCTATTTCTTTGGCTGCGTGGAGAAAGCAAAAGCATAATAAACTCGATT
TCTGTGGGTGCGCATTGGACTTTTGCGGATACGAGTATCGACAGTCGTAG
TCCCGATCCATGGAACCTCGCCGGGCGCGATTTGCCTGCATCCTGGGCTC
GCTTATGCTCTGTTGAAGGTAACGTCCGTCGCTCCAACGAGTTCATTCCC
AGTCGCTCTTACCTCTCTGCAAGGCGCGCCTGAATATAGAGCGCCGTCCA
TTACTGAGTCGCGCCTGAGCGCCATCCAGTCGGAGTTGGATGTACTCTTC
AGCAACTTCTCTGGGGAATCAGCGATTGTTGGTGCTGGTGCCAGCAGCAG
CAGCAGCGACGTCGCTCGTTCCACCTCCACTTGCTCCTCGACTGCGCTCT
CGGCCATGAACGTCGACCGAACAGGGCGTCGCGTCCCCCTTGTGGCGCGA
AATAGCAAAATTCGCGCGTGACGGCCCGACAGCCTCTTTCTCTGGCGCGC
GCGCTGGCGTTCTACGAAACGTTCTTCTTATGTCAGCCCTTTTATTCCCA
GCCAACGCTCAACACTGACTCGATACGTCTTCTCCCGTCTTCGTGCTCGC
TTTCGCAGGAGGCATGTCTGCTACGCGGAGAGCGAGGACAGACGTCGGCG
GCTTCGGGGCATCCGGAGCCAGCGAGTGGGCGGCGGTACCGGGCGCGATC
GTCGAAACAGGTGAGCACAGAAAAACCGCACGGCCATGTCATCTTTATGG
CTGGTCCGTTGCGTCGATTGCCCTCGGTGCCTTCGGAACGTTCGCCACCT
ACCCCAGTTGCGCCCAACTCTGGCCTTTCACTGGTCTTCCCTTCAGCTCA
AGTGTGTTTCGTCAGCGAGATAAATCTGGACCTAAGCGTTTTTGTCGTCG
ATCGCGTGGATGGGAGGTAGTTCTGGATGCGTGGCGCTGTGACGCAGGGC
TCGAGATGTTCCCCGTTTGTGCCGTTTTTCTTCAGCATCAGCCAGTTTTG
CTTTTTGGCAGCCATGGATACTCTGCAGCTCCTGCTCCTAGCGCGCGTCA
TGATGGGCAAGAAAAAAGCGGTCAACGTTTTCATGAAACTGACACTGGCG
GTGACGTGGTTAATGCTGTGTACTCGGGAGGCCGGGGTGAGATACAGATA
AGGGGTTTCCGCTCTGCATTACGCTGCGTAATGTCTTTGTTTAGAAGCTC
GAATGGCAACTGATTCTTAGCTGCTTCTCTCGTCCTCCCCGTTCTCGTGC
ACTCGTTCCCTTCAGGCCTATCTGGCAGCCGATGCGTTGACGC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1006:10412..14204- >mRNA_H-canaliculatus_F_contig1006.92.1 ID=mRNA_H-canaliculatus_F_contig1006.92.1|Name=mRNA_H-canaliculatus_F_contig1006.92.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1006:10412..14204- (Hapterophycus canaliculatus Oshoro5f female)
GGGCCCGAACAAAACCCAAAGCAAACTTGCACCAAAATAGAGAAGAAGGA
CACCAGAAGGACGAAGAATAGAGGCTGTGGAGAAGGCGAGCGTCAGCAAC
TCCAGGGAGGAAGAACGAAGGTGGTCGGCGCACACCCAAGAGGGGCCCGA
ACAAAACCCAAAGCAAACTTGCACCAAAATAGAGAAGAAGGACACCAGAA
GGACGAAGAATAGAGGCTGTGGAGAAGGCGAGCGTCAGCAACTCCAGGGA
GGAAGAACGAAGGTGGTCGGCGCACACCCAAGAGGAGGCATGTCTGCTAC
GCGGAGAGCGAGGACAGACGTCGGCGGCTTCGGGGCATCCGGAGCCAGCG
AGTGGGCGGCGGTACCGGGCGCGATCGTCGAAACAGGAGGCATGTCTGCT
ACGCGGAGAGCGAGGACAGACGTCGGCGGCTTCGGGGCATCCGGAGCCAG
CGAGTGGGCGGCGGTACCGGGCGCGATCGTCGAAACAGGCCTATCTGGCA
GCCGATGCGTTGACGCCTATCTGGCAGCCGATGCGTTGAC back to top
|