Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 279 |
| Cds size | 270 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928633.9698293-UTR-H-canaliculatus_F_contig1006:3304..3311 | 1622928633.9698293-UTR-H-canaliculatus_F_contig1006:3304..3311 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1006 3305..3311 + |
| 1696845505.114019-UTR-H-canaliculatus_F_contig1006:3304..3311 | 1696845505.114019-UTR-H-canaliculatus_F_contig1006:3304..3311 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1006 3305..3311 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928633.979871-CDS-H-canaliculatus_F_contig1006:3311..3352 | 1622928633.979871-CDS-H-canaliculatus_F_contig1006:3311..3352 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 3312..3352 + |
| 1696845505.123303-CDS-H-canaliculatus_F_contig1006:3311..3352 | 1696845505.123303-CDS-H-canaliculatus_F_contig1006:3311..3352 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 3312..3352 + |
| 1622928633.99494-CDS-H-canaliculatus_F_contig1006:6097..6326 | 1622928633.99494-CDS-H-canaliculatus_F_contig1006:6097..6326 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 6098..6326 + |
| 1696845505.1328776-CDS-H-canaliculatus_F_contig1006:6097..6326 | 1696845505.1328776-CDS-H-canaliculatus_F_contig1006:6097..6326 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1006 6098..6326 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1006.91.1 >prot_H-canaliculatus_F_contig1006.91.1 ID=prot_H-canaliculatus_F_contig1006.91.1|Name=mRNA_H-canaliculatus_F_contig1006.91.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=90bp
MNLQLPDASHLHTRSRAFACRQPRLARKVSKFRRFWRLDVCAVVGDKITA
AADSSDVVSVARNAPDGSKRPQNPRHLATGAVAAALASFL back to topmRNA from alignment at H-canaliculatus_F_contig1006:3305..6326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1006.91.1 ID=mRNA_H-canaliculatus_F_contig1006.91.1|Name=mRNA_H-canaliculatus_F_contig1006.91.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3022bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1006:3305..6326+ (Hapterophycus canaliculatus Oshoro5f female)
ATCCACCATGAACCTTCAGCTTCCTGACGCGTCGCACTTACACACCAGGT
GGGCAACAAAAACGTTTTGTTGAGAACCTGTTCAAGGTAGATATGACTTC
TGAGTGTGGAGCCTTCTCCACACCAAGAACACTCTCGTCGATCTCCCTCC
TACAGCACATGCTTGCTGTAACATCTTTCCGCATGAAACACGGAGCCCCT
CTCTGGCCGTCTCAAGGCCGTCGGATTCGGATTGGTATTCGTCCTCTGGG
AACGATCGTAGACTGCAGTTTGGCACTTACAAACGCCCGGTTGTGGTTAT
CGGGGTGATTCAAGACCGCGCTTCCGCATGTAATACACGTTGAACTTGCC
CCGAGAGAGCACGGGATCGTGCATGAACTTGACGGTCAAACCCTCTCTCT
CTGGTGCACGGGTAGACACTTCAGGAAACTAAATGTGGTCTACTGCCGTC
GACCAATCTTCCTCTTTCAAATCTTGACATCTTCCCCAAATCAAGCAGTT
TCCCTCGTGAACTATGCTCAATGAGCTGTCCAATCTAGAGGAAAATAGTA
GCTCTCGTCAAGGGCTCACCAGATCGCGCCCGTCTGTTGGCCAGTTTCCA
CTTTGGTCGGAAGAGTAGTCGGAAGATTGGGAGATCAGAGCTCTCACCGA
TTTTTTGGAGCAAATGCTGGCCCCAAAGCACTGCAGCTGGTTTTCGAATG
CTGGACACTAATTGCAACGCCTTGCTCTGCCCAGACAAAAACAAAAACCA
GCCACCTGTCGAAGCAGAAAGGTGATCTCCTCAAGGTCCGACAAGAGGTT
ATGGTTCAGTAAAGTCCGAAAGGAGAACTACTTCATGGATCGACTTGCTT
GAGAGGATGAGATTTGCGCAGAACGGTTGTGGTGTGTCTAATTGAACGGG
TGTAACTGGAACAGTATCGAAGATCGCGTTCATCTTGCCCACCAAGTCCA
TGCGGCAAAATAATATCCTCCTAAGTCCCATCAAGTCCCGAGTCCCTCCC
GAACCACTGCGCGTCCCAAAAAAACGTGGTGATGCAAAAAAGCTGCATAC
ACAATAGAACAGAGTCCCTACTATAGTCCATGTACACGCTGCCCGTTACT
CTATTCTCTCGACGCCGTCAATCGATCAAAGCTGGCTCGTCCCTCAACGT
AGATCAGCTGATCTCGTGCTTGCCTTGCGACCCCCTCCCCAGCACGAGCA
AAAACACTGGTTGGCCTCGTTGCCGGCTCAGGTGCCGTCATGATCGGCAC
CATCTAACTTAGGCCAGCGAAGCTCGTCGCGCACACACTGAGAAAACATG
GCCTCCGAAGCTTGGCAATAGCGCCAGAGGGATCAAAACGACGCCAAATC
AACGACTGTTTCCTTCATGGGAACCGTGGCGGCCGCCCTCCGTCCGCGTG
TGGAAGGCGACCGGACCTCTCGCTCAATCAAACGGGGTGATTACCACGCT
GCAAACACTGTCCAGAACGCACCAGACCGCTCACACAGTGGCTAGCGCTA
ACCAGGTCAACCGGCGCATGTCGATGGCCTTTCACAGTCAAATTATGGTG
ATCCTGCCTCCCGTTCGGATTTTTTATTTGTATCCTCTTCAAGATCATCG
AGGATTTTGTATCCTCTACAAGATCATAAACTTATCTGACACAAGAGGCG
GTGAAGGGCTGGGGCCGATTGCAGGGTGAAGGGCAGATAGAGAAGTTGCT
CGAGTTAAAAATCGAAGAATCCGAAGCTTGAACACATAAGGTCGGACATG
GGTCGGGCTTCTCTTGCTCGCCAGAGAGCGCGGTGAATTGTGGCGGTTTC
GTTGTCTTTAACCAAGGGCATTTTCCATCCGTAGACTACATATAGCACAG
ACGTTCTTCGGGTTGCGCGGGTTCCTGAACAACTAAAATGCGTCCCGAGT
GGGATGCGTGGGCTACAATCCGTTCCCCCTGAAGATATGATGAGATACAA
AACAATTTCTGGCGGGCTACTACTGCGGAATAAATGGCAAACACACGATA
CACACACGAATGCTCAGCATGTATGTCCCGATCGACACCAAGGGCGAAAA
TACGGTTGAAATCAACGATGGTAGACAGGATCTCTGTGTTCCTGTATCAC
TGGATTTCAGAGTCCACTGTCGGAAAAAACATCTTACGTGCAGAGTCGCG
TCTTCTTCTGACTCCACGATCGCCGCAGAAACCCACACTGTACTGTAGGC
CGTAGGGAAGAAGTCTGGGGCTCCGCGATTGAGGACGAAACAACATGGCT
GCGTTTGAAAAGCTAAGGATAACCCGTGATCTGGGGCAACGGAGATATTC
CAACAGTCATACGACCATATCACCACTCCCACGTAAAGCAAGAAATTTTG
GGCGCAGCTCCCACGTGGGGTGTGTTTCGGGCGATCCTTTCCAGGGAGAC
ACCCCGGGCAGTTGATGCAACGCAAAGCGGATGGCGTATGCGGCACAATG
ATGCACATGAACAAGAACAATCCCGGCATTTGTCGTTCCTCAACGCCAAC
TTGCAGATCACTGCAACCGCGCTACAGCACCAGATGATCATCGCATGAGA
GCACGTTACCGAGGTCTACAGTCTAGCTCGGCAGATGTATTTGTATCCAC
GGTGGACGAAGGCGCTGGGACCGAAGATTCAACTGCTCCGAAGGACCCCG
GAAAAATAAACTGCTGTGTGCAAGACACTTGAACCCGTTAAGAAGATGAC
AGAAAGTGATCAATCGATATTCATGCCCGTTGCCCCTTCGACTCCGTCAT
TTCTGCTTGGCCGGCCGGCTCGTCTCTCACCACGCTCCCGAAGGTCTCGT
GCCTTTGCTTGCCGCCAACCCCGTCTCGCACGAAAAGTTAGCAAGTTCCG
TCGGTTTTGGCGCCTCGACGTTTGCGCCGTCGTCGGCGACAAGATCACTG
CCGCGGCCGACAGCAGCGACGTGGTCTCCGTTGCGCGCAACGCCCCCGAC
GGATCAAAGCGGCCCCAGAACCCCCGACACCTAGCCACTGGAGCCGTGGC
GGCCGCTCTTGCGTCCTTTTTG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1006:3305..6326+ >mRNA_H-canaliculatus_F_contig1006.91.1 ID=mRNA_H-canaliculatus_F_contig1006.91.1|Name=mRNA_H-canaliculatus_F_contig1006.91.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1006:3305..6326+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAACCTTCAGCTTCCTGACGCGTCGCACTTACACACCAGATGAACCTT
CAGCTTCCTGACGCGTCGCACTTACACACCAGGTCTCGTGCCTTTGCTTG
CCGCCAACCCCGTCTCGCACGAAAAGTTAGCAAGTTCCGTCGGTTTTGGC
GCCTCGACGTTTGCGCCGTCGTCGGCGACAAGATCACTGCCGCGGCCGAC
AGCAGCGACGTGGTCTCCGTTGCGCGCAACGCCCCCGACGGATCAAAGCG
GCCCCAGAACCCCCGACACCTAGCCACTGGAGCCGTGGCGGCCGCTCTTG
CGTCCTTTTTGGTCTCGTGCCTTTGCTTGCCGCCAACCCCGTCTCGCACG
AAAAGTTAGCAAGTTCCGTCGGTTTTGGCGCCTCGACGTTTGCGCCGTCG
TCGGCGACAAGATCACTGCCGCGGCCGACAGCAGCGACGTGGTCTCCGTT
GCGCGCAACGCCCCCGACGGATCAAAGCGGCCCCAGAACCCCCGACACCT
AGCCACTGGAGCCGTGGCGGCCGCTCTTGCGTCCTTTTTG back to top
|