mRNA_H-canaliculatus_F_contig10052.87.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: D8LG46_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG46_ECTSI) HSP 1 Score: 297 bits (761), Expect = 3.580e-87 Identity = 148/163 (90.80%), Postives = 156/163 (95.71%), Query Frame = 1 Query: 931 QQCRCPFFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAIMQ 1419
+QC CPFF+ LLREVDKCR+FFLENE ELK+RT+RLQLALDH+KRPDLSRLSSVKGAHMKLMQACVNFYRDALL+EDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMA QPFAMYPGVAKRVVQVEQIFRDIE+MCFLRTGEG KSVMK ELTVVEA MQ
Sbjct: 218 RQCECPFFSALLREVDKCRIFFLENEGELKIRTKRLQLALDHLKRPDLSRLSSVKGAHMKLMQACVNFYRDALLVEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMADQPFAMYPGVAKRVVQVEQIFRDIEHMCFLRTGEGMKSVMKNELTVVEAFMQ 380
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A6H5JX04_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX04_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.580e-28 Identity = 83/187 (44.39%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 1018 KVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQ---------------------------------------------------------------------------------------------------ACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAM 1281
K RT RLQLALDH+KRPDLSRLSSVKGAHMKLMQ ACVNFYRDALL+EDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMA QPFAM
Sbjct: 11 KARTERLQLALDHLKRPDLSRLSSVKGAHMKLMQVCGVDGLTAALNALSMGVEEVAVGRGGEQDPEDEVVKTLAADAEAALNEQINDNFTEYSDSDEEELKDTGEVESAGGRKLMAPPPPLLGSVGIFRSTRAACVNFYRDALLVEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMANQPFAM 197
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 8.890e-18 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAI 1413
FF TL EV K F+L EQ++ R RR++L L ++K+P A +K+ +AC++ Y+D LLLE+FA++NY A K LKK DK + FM V+ QPF YP + + + ++E+IF++I+ + G+ + + + E +EAI
Sbjct: 77 FFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTV---LEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDAL----QGDKARPLEEEERLFLEAI 224
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.580e-17 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAI 1413
FF TL EV K F+L EQ++ R RR++L L ++K+P A +K+ +AC++ Y+D LLLE+FA++NY A K LKK DK + FM V+ QPF YP + + + ++E+IF++I+ + G+ + + + E +EAI
Sbjct: 77 FFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTV---LEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDAL----QGDKARPLEEEERLFLEAI 224
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A8J2SU39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU39_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.650e-17 Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAIMQASGMGAIG 1443
FF L E+ K FF + E L+VR R++ AL ++ D RL ++ A + ++ACV +YRD LLLE++A++NY K+LKK DK G + + FM +A QPF YP + + + + E ++RDI G +SV L+ + Q S +G +G
Sbjct: 67 FFRALRFELQKSAQFFRQAELVLEVRRERVREALRQLQ--DEDRLGLLEDAPDRALRACVTYYRDLLLLENYAIMNYCGFSKILKKHDKQTGFTTRTQFMRVCVAPQPFTRYPRLMEMIREAEDLYRDIAAAS--DRIRGTRSVDPPPLSPSSSSQQLSTLGGVG 227
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.660e-16 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKG-AHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAIM 1416
F+ L +E+ KC FF E +L VR R+ + P++ V+G + +LM ACV Y+D LLLE+FA++NY K+LKK DKL G + FM V+ PF YP V K + VE +F++IE++ G + ++ E ++ ++
Sbjct: 64 FYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVV----VEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTML 216
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A6H5K0R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0R8_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 3.550e-14 Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 1 Query: 1282 YPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAIMQA 1422
YPGVAKRVVQVEQIFRDIE+MCFLRTGEG KSVMK ELTVVEA +QA
Sbjct: 12 YPGVAKRVVQVEQIFRDIEHMCFLRTGEGMKSVMKNELTVVEAFIQA 58
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A024GRD0_9STRA (SPX domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRD0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 7.490e-14 Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRDIENMCFLRTGEGFKSVMKAELTVVEAIMQASGMGAIGINSK 1455
FF TL E+ K FF+ + + + L+ +K S M+LM++CVN Y++ LLLE+FA++N+ + K+LKK DK G + + FM ++ QPFA Y + K + ++EQIF + C + + K K E + A MQ + AI SK
Sbjct: 72 FFRTLRVEIKKIATFFIREQAKFTGQIGALETQFQQLK------TSPSASIQMELMKSCVNVYKELLLLENFAVMNFCGISKILKKHDKWTGYATRHKFMHTILMKQPFATYCPLLKMINRLEQIFMEATG-CSIDEHDSKKC--KKEELLKRAKMQQTQETAISAESK 231
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.960e-13 Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKR-PDLSRLSSVKGAHMK-LMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVM-AAQPFAMYPGVAKRVVQVEQIFRDIE 1338
FF L +E+ KC+ FF E + VR R++ + P++ V G K LM ACV Y+D LLLE+FA++NYTA K+LKK DKL G + +M V+ F YP V + + VE++FR I+
Sbjct: 70 FFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVP----VDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQ 198
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Match: F0W945_9STRA (Uncharacterized protein AlNc14C38G3311 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W945_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.210e-13 Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 949 FFATLLREVDKCRVFFLENEQELKVRTRRLQLALDHIKRPDLSRLSSVKGAHMKLMQACVNFYRDALLLEDFAMLNYTAVIKLLKKRDKLAGTSDQRPFMAEVMAAQPFAMYPGVAKRVVQVEQIFRD 1332
FF TL E+ K FF++ + + + L+ +K S M+LM++CVN Y+D LLLE+FA++N+ + K+LKK DK G + + FM ++ QPFA Y + K + ++EQIF +
Sbjct: 570 FFRTLRVEIKKIATFFVKEQAKFTGQIGALEAQFQQLK------TSPSASIQMELMKSCVNVYKDLLLLENFAVMNFCGISKILKKHDKWTGYATRHKFMHTILMKQPFATYCPLLKMINRLEQIFME 691 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10052.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10052.87.1 >prot_H-canaliculatus_F_contig10052.87.1 ID=prot_H-canaliculatus_F_contig10052.87.1|Name=mRNA_H-canaliculatus_F_contig10052.87.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=486bp MKFAKHLARAMEVSDPEWHPFWVNYKHLKKLLKPAVGNTDTLLPAAAAAAback to top mRNA from alignment at H-canaliculatus_F_contig10052:1481..5100+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10052.87.1 ID=mRNA_H-canaliculatus_F_contig10052.87.1|Name=mRNA_H-canaliculatus_F_contig10052.87.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3620bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10052:1481..5100+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10052:1481..5100+ >mRNA_H-canaliculatus_F_contig10052.87.1 ID=mRNA_H-canaliculatus_F_contig10052.87.1|Name=mRNA_H-canaliculatus_F_contig10052.87.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2916bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10052:1481..5100+ (Hapterophycus canaliculatus Oshoro5f female)back to top |