mRNA_H-canaliculatus_F_contig1005.83.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: D8LGS1_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS1_ECTSI) HSP 1 Score: 139 bits (349), Expect = 9.050e-37 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 4 AQPLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTSW 222 A PLDPDS+ DKATAERFV QLAWWADPIYFGDYPQ M+D +G+RLP FTEEESAL+AGSNDFFGLNHYTSW Sbjct: 223 AVPLDPDSDADKATAERFVEFQLAWWADPIYFGDYPQVMKDLVGDRLPVFTEEESALIAGSNDFFGLNHYTSW 295
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: A0A6H5JDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ5_9PHAE) HSP 1 Score: 137 bits (346), Expect = 2.760e-36 Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 4 AQPLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTSW 222 A PLDPDS+ DKATAERF+ QLAWWADPIYFGDYPQ M+D +G+RLP FTEEESAL+AGSNDFFGLNHYTSW Sbjct: 248 AAPLDPDSDADKATAERFMEFQLAWWADPIYFGDYPQVMKDVVGDRLPVFTEEESALIAGSNDFFGLNHYTSW 320
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: A0A162IDG4_9PEZI (Beta-glucosidase n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A162IDG4_9PEZI) HSP 1 Score: 102 bits (253), Expect = 1.020e-23 Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 1 AAQPLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 A P DP+ ED A AER + ++W+ADPIYFG YP +MR ++G+RLPTFT+EE AL+ GSNDF+G+NHYT+ Sbjct: 243 ATYPWDPEDPEDVAAAERKIEFAISWFADPIYFGHYPASMRAQLGDRLPTFTDEERALVQGSNDFYGMNHYTA 315
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: B5JPZ5_9BACT (Beta-glucosidase n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JPZ5_9BACT) HSP 1 Score: 102 bits (253), Expect = 1.040e-23 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 22 DSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 DS EDKA AER + L W+ADP+YFGDYP +MRDR+G+RLP F+E++ ALL GS+DFFGLNHYT+ Sbjct: 233 DSAEDKAAAERALEFFLGWFADPVYFGDYPASMRDRVGDRLPQFSEKDRALLKGSSDFFGLNHYTT 298
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: A0A1Z5KBD0_FISSO (Beta-glucosidase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBD0_FISSO) HSP 1 Score: 102 bits (254), Expect = 1.070e-23 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 22 DSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 DSEED+A A+R + L W+ADPIYFGDYPQ+MRD++G RLP F+EE+ ALL GS+DFFGLNHY + Sbjct: 418 DSEEDRAAAQRALEFSLGWFADPIYFGDYPQSMRDQLGPRLPEFSEEDRALLRGSSDFFGLNHYNT 483
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: T0PVD6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PVD6_SAPDV) HSP 1 Score: 95.9 bits (237), Expect = 1.940e-23 Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 46 AERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHY 213 AER V+ L W+ADPIYFGDYP+AM+ R+G+RLP FT EESALL GSNDFFG+NHY Sbjct: 51 AERAVLFDLGWFADPIYFGDYPEAMKARLGDRLPRFTPEESALLKGSNDFFGINHY 106
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: A0A3N4HH96_ASCIM (Family 1 glycosyl hydrolase n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4HH96_ASCIM) HSP 1 Score: 101 bits (251), Expect = 1.960e-23 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 10 PLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 P DP+ D AER + +AW+ADPIYFGDYP +MR ++GERLPTFTEEE L+ GSNDF+G+NHYT+ Sbjct: 249 PWDPEDPRDVEAAERKLEFSIAWFADPIYFGDYPASMRKQLGERLPTFTEEEVKLVKGSNDFYGMNHYTA 318
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: A0A1E5SNZ7_9BACT (Beta-glucosidase n=2 Tax=unclassified Roseivirga TaxID=2626142 RepID=A0A1E5SNZ7_9BACT) HSP 1 Score: 100 bits (249), Expect = 3.260e-23 Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 22 DSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 D EDK AER + L W+ADP+YFGDYPQ M+DR+G+RLP FT EES +L GS+DFFGLNHYT+ Sbjct: 232 DKPEDKEAAERALQFFLGWFADPVYFGDYPQVMKDRLGDRLPEFTSEESKMLKGSSDFFGLNHYTT 297
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: G0SHK8_CHATD (Beta-glucosidase-like protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0SHK8_CHATD) HSP 1 Score: 99.8 bits (247), Expect = 7.530e-23 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 1 AAQPLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 A P DP+ D +R + ++W+ADPIYFGDYP +MR ++GERLPTFTEEE AL+ GSNDF+G+NHYT+ Sbjct: 238 ATYPWDPEDPADIEACDRKIEFAISWFADPIYFGDYPASMRKQLGERLPTFTEEEVALVKGSNDFYGMNHYTA 310
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Match: UPI0014389B7E (GH1 family beta-glucosidase n=1 Tax=Lewinella antarctica TaxID=442734 RepID=UPI0014389B7E) HSP 1 Score: 99.4 bits (246), Expect = 8.630e-23 Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 22 DSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTFTEEESALLAGSNDFFGLNHYTS 219 DSE D+A A+R + LAW+ADPIYFGDYP MR+ +G+RLP FT+EE +L GS+DFFGLNHYT+ Sbjct: 232 DSEADRAAAQRSLEFMLAWFADPIYFGDYPAVMREHLGDRLPKFTDEEKEMLKGSSDFFGLNHYTT 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1005.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1005.83.1 >prot_H-canaliculatus_F_contig1005.83.1 ID=prot_H-canaliculatus_F_contig1005.83.1|Name=mRNA_H-canaliculatus_F_contig1005.83.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp AAQPLDPDSEEDKATAERFVVHQLAWWADPIYFGDYPQAMRDRIGERLPTback to top mRNA from alignment at H-canaliculatus_F_contig1005:280..504+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1005.83.1 ID=mRNA_H-canaliculatus_F_contig1005.83.1|Name=mRNA_H-canaliculatus_F_contig1005.83.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=225bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1005:280..504+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1005:280..504+ >mRNA_H-canaliculatus_F_contig1005.83.1 ID=mRNA_H-canaliculatus_F_contig1005.83.1|Name=mRNA_H-canaliculatus_F_contig1005.83.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=450bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1005:280..504+ (Hapterophycus canaliculatus Oshoro5f female)back to top |