Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 173 |
| Cds size | 102 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928632.684408-UTR-H-canaliculatus_F_contig10045:4362..4431 | 1622928632.684408-UTR-H-canaliculatus_F_contig10045:4362..4431 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10045 4363..4431 + |
| 1696845504.2032514-UTR-H-canaliculatus_F_contig10045:4362..4431 | 1696845504.2032514-UTR-H-canaliculatus_F_contig10045:4362..4431 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10045 4363..4431 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928632.6942089-CDS-H-canaliculatus_F_contig10045:4431..4448 | 1622928632.6942089-CDS-H-canaliculatus_F_contig10045:4431..4448 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10045 4432..4448 + |
| 1696845504.2116578-CDS-H-canaliculatus_F_contig10045:4431..4448 | 1696845504.2116578-CDS-H-canaliculatus_F_contig10045:4431..4448 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10045 4432..4448 + |
| 1622928632.7049675-CDS-H-canaliculatus_F_contig10045:4569..4654 | 1622928632.7049675-CDS-H-canaliculatus_F_contig10045:4569..4654 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10045 4570..4654 + |
| 1696845504.2226138-CDS-H-canaliculatus_F_contig10045:4569..4654 | 1696845504.2226138-CDS-H-canaliculatus_F_contig10045:4569..4654 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10045 4570..4654 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10045.79.1 >prot_H-canaliculatus_F_contig10045.79.1 ID=prot_H-canaliculatus_F_contig10045.79.1|Name=mRNA_H-canaliculatus_F_contig10045.79.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=34bp
MKPNSGYGQAGLHLASQFMRREKVDPPAPLENKG back to topmRNA from alignment at H-canaliculatus_F_contig10045:4363..4654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10045.79.1 ID=mRNA_H-canaliculatus_F_contig10045.79.1|Name=mRNA_H-canaliculatus_F_contig10045.79.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=292bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10045:4363..4654+ (Hapterophycus canaliculatus Oshoro5f female)
ATACTCGAGGCCAACCTTCTGTCGGCGCCCGGGTTACGGCCTCCACCGCC
GCCGACTCTGCGGTGAACCATGAAGCCCAACTCAGGGTGAGGAGGAAGGC
AACGTGCATGAAGCCCAGGAGCACTTGTTGTTTCGTTTGTGGTTTCAACC
AATGGACCCCTGTAACCTAGCCCCGGCCTCCGTTCTACCCCATATTGTCC
GCCGCAGGTATGGTCAAGCCGGGCTTCATCTCGCTAGCCAGTTCATGCGG
AGGGAAAAGGTTGACCCCCCGGCTCCCCTCGAGAACAAGGGC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10045:4363..4654+ >mRNA_H-canaliculatus_F_contig10045.79.1 ID=mRNA_H-canaliculatus_F_contig10045.79.1|Name=mRNA_H-canaliculatus_F_contig10045.79.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=204bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10045:4363..4654+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAGCCCAACTCAGGATGAAGCCCAACTCAGGGTATGGTCAAGCCGGG
CTTCATCTCGCTAGCCAGTTCATGCGGAGGGAAAAGGTTGACCCCCCGGC
TCCCCTCGAGAACAAGGGCGTATGGTCAAGCCGGGCTTCATCTCGCTAGC
CAGTTCATGCGGAGGGAAAAGGTTGACCCCCCGGCTCCCCTCGAGAACAA
GGGC back to top
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