mRNA_H-canaliculatus_F_contig10044.76.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A6H5JFB7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB7_9PHAE) HSP 1 Score: 277 bits (709), Expect = 4.830e-91 Identity = 122/201 (60.70%), Postives = 150/201 (74.63%), Query Frame = 1 Query: 1 PAQLSFQTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP------VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 P +LSF+T +W CPL C +C ANG RC RVCFG+P CW+HN K+GV+ K STIP AG+GLFAT +L KDSWICPY GE TTM CI +RYPG MT+ YTE+IP D AC RG+GSLAN RFNADG VS L++ NC+SR RP GDG PG+WLKTT++++ GDEIF+WYG+GGYLLQD +T ++R + PD Sbjct: 8 PTELSFRTADWSCPLKCGQCTHTRANGTRCRNRVCFGSPVCWLHNCIKYGVEIKDSTIPGAGKGLFATTRLPKDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEKIPGPANLAFDCACSRGVGSLANARFNADGKVSALSRQNCLSRYRPVGDGVPGVWLKTTRVVEDGDEIFNWYGDGGYLLQDNHST----SRRAKAPD 204
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A6H5JAG7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG7_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.960e-90 Identity = 119/201 (59.20%), Postives = 155/201 (77.11%), Query Frame = 1 Query: 1 PAQLSFQTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP------VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 P + SF+T +W CPL C++C+ + ANG RC RVCFGTP C +HNS K+GV++KTSTI NAG+GLFATR K+SWICPY+GE T+ CI+KRYPGDMT+ Y E +P +DSAC+RG+ SLANG FNA+G+VS L++HNC+SR RP GDG PG+WLK+TK +K GDEIF+WYG+GGY+LQ +T+ +R + PD Sbjct: 8 PKEYSFRTASWSCPLTCEQCQEVRANGMRCKNRVCFGTPLCHVHNSLKYGVKAKTSTIVNAGKGLFATRAFPKNSWICPYLGEKTSKDCIQKRYPGDMTAAYAEILPGPEQLHIDSACKRGVASLANGLFNANGSVSSLSRHNCVSRYRPVGDGVPGVWLKSTKPLKIGDEIFNWYGDGGYMLQHNHSTK----RRTKAPD 204
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: B5LWM5_9PHYC (Putative lysine methyltransferase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM5_9PHYC) HSP 1 Score: 270 bits (689), Expect = 5.070e-88 Identity = 119/199 (59.80%), Postives = 147/199 (73.87%), Query Frame = 1 Query: 1 PAQLSFQTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP----VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 P +L F+T NW CPL C +C NG RC RVCFG P CW+HNS KFGV+ K STIP AG+GLFATR++ K++WICPY GE TTM+CI +RYPGD T+PY E+I D AC RGIGSLANGRFNA+G VS + +HNCISR RP G+G PG+WLK+TK IK+G+E+ +WYG+GGY LQ +TR +R + PD Sbjct: 9 PTELRFETDNWSCPLKCNKCTFTRPNGLRCKNRVCFGFPLCWIHNSQKFGVKIKQSTIPGAGKGLFATRQIPKNTWICPYSGEETTMECIHQRYPGDSTAPYAEKISDNIAYDCACSRGIGSLANGRFNANGKVSSVRRHNCISRYRPVGEGVPGVWLKSTKDIKSGEELMNWYGDGGYQLQQNHSTR----RRRRAPD 203
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: Q8QNC4_ESV1K (EsV-1-158 n=2 Tax=root TaxID=1 RepID=Q8QNC4_ESV1K) HSP 1 Score: 268 bits (684), Expect = 2.820e-87 Identity = 117/199 (58.79%), Postives = 147/199 (73.87%), Query Frame = 1 Query: 1 PAQLSFQTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIPV----DSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 P +LSF+T NW CPL C +C +G RC RVCFG+P CW+HN+ K+GV+ K STIP AG+GLFATRK+ +DSWICPY GE+TTM CI +RYP T+ YTEQ+ D AC RGIGSLAN +FN++GTVS L +HNC SR RP GDG PG+WLK+TK+I+ G EIF+WYG GGY LQD +T ++R ++PD Sbjct: 8 PTELSFRTANWSCPLTCGQCTHTRDDGLRCKNRVCFGSPVCWVHNARKYGVKIKDSTIPGAGKGLFATRKIPRDSWICPYSGEATTMNCIHQRYPEGETAAYTEQVQANLAYDCACSRGIGSLANAQFNSNGTVSALRRHNCFSRYRPVGDGVPGVWLKSTKVIEEGQEIFNWYGNGGYRLQDNHST----SRRAKVPD 202
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: Q6XLV1_9PHYC (FirrV-1-G2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLV1_9PHYC) HSP 1 Score: 246 bits (627), Expect = 2.670e-78 Identity = 110/191 (57.59%), Postives = 129/191 (67.54%), Query Frame = 1 Query: 1 PAQLSF------QTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP--------VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLL 531 P ++SF W CPL CQRC + NG +C KRVC G PFCW+H A FGV KTSTIPNAG+GLFATR +K++WICPY GE C +RYPG T+PY E +P VDSAC R +GSLANG+F DG+VS L HNC +R RP GDGF G+WLK+TK IKAGDEIF+WYGEG Y L Sbjct: 14 PREMSFVFEKDEDDSTWSCPLLCQRCAYVRPNGEQCKKRVCVGHPFCWIHVRAAFGVTVKTSTIPNAGKGLFATRDFKKNTWICPYFGEIIDANCFVQRYPGKATAPYAEMLPLNTTPRKYVDSACTRSVGSLANGKFKGDGSVSSLRHHNCFTRYRPVGDGFKGVWLKSTKTIKAGDEIFNWYGEGNYNL 204
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE) HSP 1 Score: 220 bits (560), Expect = 2.140e-66 Identity = 103/165 (62.42%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 16 FQTKNWLCPLACQRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP----VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEI 498 FQT +W PL RC+ G RC KRV FG P +HN K+ VQ K STIP AG GLFATR + K SW+CPYVGE TTM CI KRYPG MT+PYT Q+P VDSA RGIGSLA+G+FNADGTVS L++HNC++R+RP GDG PG WLKTTK + GDEI Sbjct: 11 FQTADWSLPLVSGRCQHETRKGTRCKKRVSFGYPLRSVHNKLKYEVQIKPSTIPGAGEGLFATRSIPKGSWLCPYVGEETTMSCIHKRYPGTMTAPYTMQLPGGLAVDSALVRGIGSLASGKFNADGTVSSLDRHNCVARVRPVGDGIPGPWLKTTKHRRPGDEI 175
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A6H5J8Q0_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Q0_9PHAE) HSP 1 Score: 196 bits (498), Expect = 1.240e-59 Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 130 HNSAKFGVQSKTSTI-PNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQIP------VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 H+ + K ST+ NAG+GLFATR K+SWICPY+GE T+ CI+KRYPGDMT+ Y E +P +DSAC+RG+ SL+NG FNA+G+VS L++HNC+SR RP GDG PG+WLK+TK +K GDEIF+WYG+GGY+LQ +T+ +R + PD Sbjct: 11 HHGHSSHLTCKYSTVLVNAGKGLFATRAFPKNSWICPYLGEKTSKDCIQKRYPGDMTAAYAEMLPGPEQLHIDSACKRGVASLSNGLFNANGSVSSLSRHNCVSRYRPVGDGVPGVWLKSTKPLKIGDEIFNWYGDGGYMLQHNHSTK----RRTKAPD 165
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A6H5J8I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8I0_9PHAE) HSP 1 Score: 130 bits (326), Expect = 1.260e-34 Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 292 MTSPYTEQIP------VDSACRRGIGSLANGRFNADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGEGGYLLQDCRTTRPGGAKRCQIPD 585 MT+ Y E +P +DSAC RG+ SL+NG FNA+G+VS L++HNC+SR RP GDG PG WLK+TK IK GDEIF+WYG+GGY+LQ +T+ +R + PD Sbjct: 1 MTASYAEMLPGPEQLHIDSACNRGVASLSNGLFNANGSVSSLSRHNCVSRYRPVGDGVPGAWLKSTKPIKIGDEIFNWYGDGGYMLQHNHSTK----RRTKEPD 100
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A1Y1I2A4_KLENI (SWIB/MDM2 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2A4_KLENI) HSP 1 Score: 68.6 bits (166), Expect = 1.730e-9 Identity = 47/137 (34.31%), Postives = 63/137 (45.99%), Query Frame = 1 Query: 139 AKFGVQSKTSTIPNAGRGLFATRK-------LEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQ----IPVDSACRRGIGSLANGRF-NADGTVSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYG 513 A G++ +TS IP AG+GLFA K + IC Y G+ + +RY G T PY + +D AC+RG G++ANGR + D N H G L +K TK I+ G EI YG Sbjct: 260 ANSGLKIQTSPIPGAGKGLFAWSKHGGNEIVFVPNETICSYDGDVISQAEFDRRY-GQDTGPYVAGGQAGLLIDGACKRGAGTVANGRRGHVDSNARFSNSH---------AGGVQRLTIKATKNIRHGQEIIVPYG 386
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Match: A0A2H5XTU5_9BACT (SET domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2H5XTU5_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 7.140e-9 Identity = 44/163 (26.99%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 52 QRCESLNANGRRCMKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYVGESTTMKCIKKRYPGDMTSPYTEQI---PVDSACRRGIGSLANGRFNADGT-----VSHLNQHNCISRLRPKGDGFPGLWLKTTKIIKAGDEIFHWYGE 516 ++C ++ +G RC + P+C H GV+ + STIP AG GLFA R++ KD+++ Y G+ ++ +RY PY ++ V A R G +A + G+ V + + C+ +W T + I+ G E+ YGE Sbjct: 22 KQCAYVHPDGERCRRLTTLTHPYCAHHTRHVHGVEVRPSTIPGAGLGLFAVRRIPKDTFLFHYDGDRLSVAEYSERYAELGFGPYAIELNHRTVIDAYRTDAG-IARFICSYHGSGRKPNVQYFSTGKCVE-----------VW--TIRTIEPGQELLADYGE 170 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10044.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 18 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10044.76.1 >prot_H-canaliculatus_F_contig10044.76.1 ID=prot_H-canaliculatus_F_contig10044.76.1|Name=mRNA_H-canaliculatus_F_contig10044.76.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=241bp MKRVCFGTPFCWMHNSAKFGVQSKTSTIPNAGRGLFATRKLEKDSWICPYback to top mRNA from alignment at H-canaliculatus_F_contig10044:3429..4271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10044.76.1 ID=mRNA_H-canaliculatus_F_contig10044.76.1|Name=mRNA_H-canaliculatus_F_contig10044.76.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=843bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10044:3429..4271+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10044:3429..4271+ >mRNA_H-canaliculatus_F_contig10044.76.1 ID=mRNA_H-canaliculatus_F_contig10044.76.1|Name=mRNA_H-canaliculatus_F_contig10044.76.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1446bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10044:3429..4271+ (Hapterophycus canaliculatus Oshoro5f female)back to top |