mRNA_H-canaliculatus_F_contig10041.75.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI) HSP 1 Score: 679 bits (1753), Expect = 7.450e-235 Identity = 435/626 (69.49%), Postives = 461/626 (73.64%), Query Frame = 1 Query: 25 TQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLGRARLPPSTLQRLWSEAGGESPEECLARPQWFVLLALVALAQAGLPCTLRDLLHTCDVLSAPKSPHTQAFQQHPGGSXXXXXXXXXSAGRLRPIPDFFLDGGIPPPPPLAHPSSSPASPTHGAAGGPAGLAQALPASAGGR-QHQRPGGKAGRGRSTVGLPGSGGQQHQGKVVGAWDYYGGGGAGGS---GW-DQGSSEHAPAGPGRGAGEEDGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIPGSGGAHG---SAAWGDTFSPSMAGGGGTPVSPALSSSPGTTPPDESAGVGFVRRRFSLGGADDMCVPGXXXXXXXXXXXXXXXXVLAGGVPGARQGQRRSVSFXXXXXXXXXXXXXXXGALVVRGAGGWTGSGASWPLSVVANAGYEAYGNYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEQDPLYEAEVARIEELVAPVTGAVKIMESAAVLKRGVGYEMSRLGHYLTQVS 1878
TQGRSLYFTPRET+IFGYLFDLADTDDDGLVG NDGGHALLGR+RLP STLQRLW+EAGGESP+ECLARPQWFVL+ALVALAQAG PCTLRDLL+TCDV+S S XXXXXXXXX LRPIPDF + A PT A A+A PA G ++ P G +G+G T +PGS G Q GGAG S GW ++G +G QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVA+HPILSR+Y FQVFLEGTPRGLRAAKALLPAR+PG G + SAAWGDTFSPSMAG GGTPVSPALSS+P TTPPDES GFVRRRF+LGGADDM XXXXXXXX XXXXX RQGQRRSVSF G GWTGS LSVVAN GYEAY NYVSTSVSTSLTSIKGVLGAVKT+AKSAVGLGAGPAPIAVE DPLYEAEVARIEELVAPV G+VKIMESAAVLKRGVGYEMSRLGHYLTQV+
Sbjct: 5 TQGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVS---SAXXXXXXXXXXXXXXXXXXXXXXXRLLRPIPDFXXXXXXXXXXXXXXXXXA-AVPTMIAEA----AAEACPAGVGTTGANKHPRGMSGKGGRTADVPGSRGGQR-------------GGAGASEQSGWREEGXXXXXXX-------XXEGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDES---GFVRRRFTLGGADDMYXXXXXXXXXXXVDGXXXXXXXI------RQGQRRSVSFGASSDESLCNGAAGGGQ-----GPGWTGSA----LSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVA 584
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE) HSP 1 Score: 635 bits (1638), Expect = 6.740e-211 Identity = 395/625 (63.20%), Postives = 420/625 (67.20%), Query Frame = 1 Query: 25 TQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLGRARLPPSTLQRLWSEAGGESPEECLARPQWFVLLALVALAQAGLPCTLRDLLHTCDVLSAPKSPHTQAFQQHPGGSXXXXXXXXXSAGRL-RPIPDFFLDGGIPPPPPLAHPSSSPASPTHGAAGGPAGLAQALPA---SAGGRQHQRPGGKAGRGRSTVGLPGSGGQQHQGKVVGAWDYYGGGGAGGSGWDQGSSEHAPAGPGRGAGEEDGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIPGSGGA---HGSAAWGDTFSPSMAGGGGTPVSPALSSSPGTTPPDESAGVGFVRRRFSLGGADDMCVPGXXXXXXXXXXXXXXXXVLAGGVPGARQGQRRSVSFXXXXXXXXXXXXXXXGALVVRGAGGWTGSGASWPLSVVANAGYEAYGNYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEQDPLYEAEVARIEELVAPVTGAVKIMESAAVLKRGVGYEMSRLGHYLTQVS 1878
T+GRSLYFTPRET+IFGYLFDLADTDDDGLVG NDGGHALLGR+RLP STLQRLW+EAGGESP+ECLARPQWFVL+ALVALAQAG PCTLRDLL+TCDV+S+ +P XXXXXXXXX AGRL RPIPDFFLDG PT A A+A PA + G +H R G +G+ T +PGS G Q G QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVL PPLPPSKWAGSSSRDFVAERMKGLQRYMTRVA+HPILSR+Y FQVFLEGTPRGLRAAKALLPAR+PG G + SAAWGDTFSPSMAG GG PVSPALSS+P TTPPDE+ GFVRRRF+LGGADDM YEAY NYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVE DPLYEAEVARIEELVAPV G+VKIMESAAVLKRGVGYEMSRLGHYLTQV+
Sbjct: 20 TEGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSASAPLPXXXXXX---XXXXXXXXXXXAGRLLRPIPDFFLDGXXXXXXXXXXXXXXXXVPTMIAEA----AAEACPAGVETTGASKHAR--GMSGKAGRTADVPGSRGGQXXXXXX-----------------XXXXXXXXXXXXXXXXXXXGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGKNNNASAAWGDTFSPSMAGAGGMPVSPALSSTPSTTPPDEA---GFVRRRFTLGGADDM---------------------------------------------------------------------------------YEAYENYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVA 534
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A507DH53_9FUNG (PX domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DH53_9FUNG) HSP 1 Score: 77.0 bits (188), Expect = 5.130e-11 Identity = 41/112 (36.61%), Postives = 56/112 (50.00%), Query Frame = 1 Query: 775 YQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHS-CFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
+ LE+ V V + SH YTV P F + V RR+ DF WL S PG++ PP+P G DFV R L+R++ R+A HPILS F++FL+
Sbjct: 226 WNLEICVGDPMKVSDPLSSHIVYTVKTKTECPAFRSSNLAVVRRYRDFLWLFSQLLTKYPGIVIPPVPEKHALGRFQDDFVENRRASLERFLKRIASHPILSSEDDFRLFLQ 337
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A8QAA9_MALGO (PX domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QAA9_MALGO) HSP 1 Score: 76.6 bits (187), Expect = 8.140e-11 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 778 QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGT 1113
+ V V + VG+ +H YTV + P FAR E+ V RR+SDFRWLH+ PGV+ PP+P G + + V R + L+R + ++ HP+L R+ ++FLE +
Sbjct: 428 EFTVRVGDPQRVGDPVTAHVVYTVRLTTNAPWFARSELSVLRRYSDFRWLHAAMVHNHPGVVVPPIPEKVKLGRFAPELVEFRRRSLERALHKILLHPMLQRDDDLKLFLESS 540
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A061S8W9_9CHLO (Sorting nexin-1/2 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W9_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 4.110e-10 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 814 GEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIP-GVLPPPLPPSKWAG--SSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGT 1113
G+G G++ Y V L F E EV RR+ DF WL Q+ GV P +P S++ DF+ R +GLQ ++ +VAEHP+L N Q+FLEG+
Sbjct: 77 GDGVGAYVSYKVWTKTRLQQFKNSENEVIRRYKDFDWLFHRLQSTNRGVFVPAIPEKNAVSKISATTDFIEGRRRGLQSFINKVAEHPVLKYNSTLQLFLEGS 179
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A9UXR8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXR8_MONBE) HSP 1 Score: 72.8 bits (177), Expect = 6.000e-10 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 781 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPS----------KWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFL 1104
LE++V + +G+G GS+ Y + ++ GFA+ EV R+SDF L+ + PG+L PP PP K G F+ +R L+R+M R+A HPIL + F+ FL
Sbjct: 45 LEISVSDPQRIGDGMGSYMVYNLNTKTTMKGFAQPSFEVQHRYSDFHALYKYLVEKYPGLLVPPPPPKSAVGTGMMKFKSQGDEVTPFIEQRQFALERFMQRIAAHPILRSDDVFKTFL 163
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A0L0T1G3_ALLM3 (PX domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1G3_ALLM3) HSP 1 Score: 72.4 bits (176), Expect = 1.450e-9 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 781 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHS-CFQAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
+VTV +G+ T Y V+ + PGF R E V+RR+S+F WL+ PG++ P P + G S FV R GLQ ++ +VA HP+L + AFQ+F+E
Sbjct: 297 FKVTVSEPTKIGDAMSPFTAYKVVTKTTQPGF-RSESVVSRRYSEFLWLYQRLVTQHPGIVVPGTPEKQAIGRFSEGFVEHRRVGLQVFLRKVAAHPVLRTDPAFQMFVE 405
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A1V9ZNJ5_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNJ5_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.930e-8 Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 811 VGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLPPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLEGTPRGLRAAKALLPARIP 1161
+G+G ++ Y V ++ P A EV RRFSDF WLH+ +A PG + PPLP S++F+ R +GLQ+++T VA H ILS F FL T L KA P
Sbjct: 10 IGDGVNAYHVYPVRSSTDGPIVA----EVDRRFSDFAWLHATLLKACPGCIVPPLPAKVVGLLHSKEFLEARRQGLQKFLTNVAGHDILSSAPCFSSFLCATNIELSQLKARAKDAAP 123
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A1X7UV49_AMPQE (PX domain-containing protein n=4 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UV49_AMPQE) HSP 1 Score: 68.6 bits (166), Expect = 1.960e-8 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 769 DGYQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLH----SCFQAIPGVLPPPLPPSKWAG----------SSSRDFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
D Y+L +TV VG+G G++ Y V +LP F E+ V RRFSDF L+ F + G + PP P G +S F+ R L+R++ R+A HP++ ++ F++FLE
Sbjct: 144 DQYELTITVAEPEKVGDGMGAYMTYLVTTKTTLPSFKEPEVFVRRRFSDFLGLYYRLSEKFMCM-GYIVPPAPEKSVTGMTKIKFSKNEENSALFIQRRRANLERFLNRLAIHPVIRKDEDFKMFLE 269
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Match: A0A096P7L0_OSTTA (Arfaptin homology (AH) domain/BAR domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P7L0_OSTTA) HSP 1 Score: 67.8 bits (164), Expect = 2.860e-8 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 781 LEVTVYSHRVVGEGYGSHTEYTVLAN---ASLPGFARREMEVARRFSDFRWLHSCFQAI-PGVLPPPLPPSKWAGSSSR-DFVAERMKGLQRYMTRVAEHPILSRNYAFQVFLE 1107
++VTV + VG+G ++ YTV A A G+ + E V RR+SDF+WL + PG++ PLP S + DF+ R +GL+ +M +V EHP+L+ +FLE
Sbjct: 40 IDVTVTNPTKVGDGLAAYAVYTVSAKKTTADAAGYKKDESIVVRRYSDFQWLRGRLSTLFPGIVLFPLPEKTVTTSPFQSDFLEHRRRGLETFMRKVVEHPVLATCEDVVMFLE 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10041.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10041.75.1 >prot_H-canaliculatus_F_contig10041.75.1 ID=prot_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=626bp TRSGTPQRTQGRSLYFTPRETLIFGYLFDLADTDDDGLVGANDGGHALLGback to top mRNA from alignment at H-canaliculatus_F_contig10041:71..5149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10041.75.1 ID=mRNA_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5079bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10041:71..5149- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10041:71..5149- >mRNA_H-canaliculatus_F_contig10041.75.1 ID=mRNA_H-canaliculatus_F_contig10041.75.1|Name=mRNA_H-canaliculatus_F_contig10041.75.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10041:71..5149- (Hapterophycus canaliculatus Oshoro5f female)back to top |