mRNA_H-canaliculatus_F_contig10030.68.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: D7FYK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK3_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.430e-78 Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 1 Query: 1 MVAQPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK 378 MVAQPPVKPQKLDKIN+LKQ+SEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKG+EKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK Sbjct: 1 MVAQPPVKPQKLDKINLLKQNSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGKEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK 126
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A6H5KR41_9PHAE (NIR_SIR_ferr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR41_9PHAE) HSP 1 Score: 236 bits (601), Expect = 2.060e-75 Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 1 Query: 1 MVAQPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEK-----AYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK 378 MVAQPPVKPQKLDKIN+LKQ+SEALREP+RSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKG+EK AYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK Sbjct: 67 MVAQPPVKPQKLDKINLLKQNSEALREPLRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGKEKVGGVDAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK 197
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A835ZIU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU7_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.620e-56 Identity = 100/130 (76.92%), Postives = 109/130 (83.85%), Query Frame = 1 Query: 1 MVAQPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIKVTSD 390 MVA+PP KP KLDKINILK +S+ LREPV+SQM TEE+ ISHDAYQILKFHGSYMQDDR RKKG EK YSFMLRLKMP G C P LY LLDDLSR+YG G++RLTTRQTFQLHGVAK NLK VI+ D Sbjct: 1 MVAEPPAKPVKLDKINILKLNSQNLREPVKSQMATEEVFISHDAYQILKFHGSYMQDDRDKRKKGAEKEYSFMLRLKMPGGECPPALYRLLDDLSRDYGCGNMRLTTRQTFQLHGVAKSNLKHVIRSIMD 130
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A835Z7S6_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S6_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.790e-56 Identity = 97/126 (76.98%), Postives = 108/126 (85.71%), Query Frame = 1 Query: 1 MVAQPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIK 378 MVA+PP KP KLDK+N++K S+ LREPVRS+M TEE+ I+HDAYQILKFHGSYMQD+R RKKG +K YSFMLRLKMP G C PELY LLDDLS EYGHGHLRLTTRQTFQLHGVAK NLK VI+ Sbjct: 42 MVAEPPAKPIKLDKVNLIKLHSQNLREPVRSEMATEEVFINHDAYQILKFHGSYMQDNRENRKKGADKDYSFMLRLKMPGGECPPELYRLLDDLSNEYGHGHLRLTTRQTFQLHGVAKSNLKHVIR 167
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A7S3JYK4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYK4_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.110e-36 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 16 PVKPQKLDKINILKQSSEALREP-VRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIKVTSD 390 P++ QKLDKIN +KQ+S LR P V E ISISHD+Y +LKFHGSY QDDR RKKGQEKA+ FMLRLK+P+G C +Y +LDDL YG LR+TTRQ +Q+HG+ K +LK VI+ + Sbjct: 40 PIQKQKLDKINEMKQASVNLRHPLVEDLADLETISISHDSYNLLKFHGSYQQDDREKRKKGQEKAFQFMLRLKVPSGECPGAVYNVLDDLCENYGQKDLRITTRQAWQIHGILKKDLKHVIRTIME 165
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A7S2SIJ1_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIJ1_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.870e-35 Identity = 70/115 (60.87%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 31 KLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVI 375 KL KI +K +S+ALREP+R++M +EI +SHD+YQILK+HGSY QD+R LRK Q+KAYSFMLRLK+P G LY LLDDL YG +LR TTRQ +Q+HGV K +LK VI Sbjct: 71 KLAKIEQVKVNSQALREPLRTEMANDEIFVSHDSYQILKYHGSYQQDNRELRKPKQQKAYSFMLRLKVPCGEVPANLYRLLDDLCDTYGEHNLRATTRQAYQMHGVMKGDLKVVI 185
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A7S4RLB8_9STRA (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLB8_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.090e-34 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 22 KPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVI 375 KP+KL KI LK SE L +P++ Q++TE+I +S DAYQILK+HGSY Q +R +R G+ K Y FMLRLK PAG PELY L+DDLS ++G G LR TTRQ FQ+HG+ K NLKTVI Sbjct: 49 KPKKLAKIEQLKVESEHLIQPLKDQLKTEDIGVSKDAYQILKYHGSYQQTNREVR--GKVKDYQFMLRLKQPAGELPPELYRLIDDLSAKHGQGDLRATTRQCFQIHGILKGNLKTVI 164
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: A0A7S3ZWP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWP3_9STRA) HSP 1 Score: 133 bits (335), Expect = 9.270e-34 Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 4 VAQPPVKPQKLDKINILKQSSEALREP-VRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIKVTSD 390 V P ++ Q LD +N +K S+ LR P V E ISISHD+Y +LKFHGSY QDDR RKKG EKA+ FMLRLK+P+G C LY +LDDL +G LR+TTRQ FQ+HG++K NLK VI+ D Sbjct: 48 VGLPGLRVQGLDGVNQMKLESDYLRHPLVEDLADMETISISHDSYNLLKFHGSYQQDDREKRKKGAEKAWQFMLRLKVPSGECPGPLYLVLDDLCERFGQRDLRMTTRQAFQIHGISKANLKHVIRTIMD 177
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: UPI0019DF68D9 (Sulfite reductase, ferredoxin dependent n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019DF68D9) HSP 1 Score: 133 bits (334), Expect = 1.090e-33 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 10 QPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVI 375 QP VK K+ K+ +K+ S ALREPV +++Q + S DA QILKFHGSY QD+R R KGQEK Y FMLR + P G P+LY +LD LS +YG+G LR TTRQ FQLHGV K NLKTVI Sbjct: 6 QPVVK--KVSKVEGIKEHSNALREPVATEIQQDTTHFSEDAVQILKFHGSYQQDNRDNRVKGQEKDYQFMLRTRNPGGFIPPQLYLVLDQLSEQYGNGTLRATTRQGFQLHGVLKQNLKTVI 125
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Match: W7TUN3_9STRA (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN3_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.670e-33 Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 1 Query: 28 QKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVI 375 QKL KI LK S+ LR P+ ++ +EI + DA Q++K+HGSY QD+R LRK G++K YSFMLRLK PAG +PELY ++DDL EYG LR TTRQ FQ+HG+ K NLKTVI Sbjct: 78 QKLAKIEQLKIRSDYLRHPLSEELDNQEIFLGTDAIQVVKYHGSYQQDNRELRKAGEQKKYSFMLRLKSPAGEVTPELYKVVDDLCSEYGQNDLRATTRQCFQIHGILKGNLKTVI 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10030.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10030.68.1 >prot_H-canaliculatus_F_contig10030.68.1 ID=prot_H-canaliculatus_F_contig10030.68.1|Name=mRNA_H-canaliculatus_F_contig10030.68.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=132bp MVAQPPVKPQKLDKINILKQSSEALREPVRSQMQTEEISISHDAYQILKFback to top mRNA from alignment at H-canaliculatus_F_contig10030:277..1404- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10030.68.1 ID=mRNA_H-canaliculatus_F_contig10030.68.1|Name=mRNA_H-canaliculatus_F_contig10030.68.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1128bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10030:277..1404- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10030:277..1404- >mRNA_H-canaliculatus_F_contig10030.68.1 ID=mRNA_H-canaliculatus_F_contig10030.68.1|Name=mRNA_H-canaliculatus_F_contig10030.68.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=792bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10030:277..1404- (Hapterophycus canaliculatus Oshoro5f female)back to top |