Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 401 |
| Cds size | 399 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928631.3875728-CDS-H-canaliculatus_F_contig10027:3210..3609 | 1622928631.3875728-CDS-H-canaliculatus_F_contig10027:3210..3609 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 3211..3609 + |
| 1696845503.3263755-CDS-H-canaliculatus_F_contig10027:3210..3609 | 1696845503.3263755-CDS-H-canaliculatus_F_contig10027:3210..3609 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 3211..3609 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10027.62.1 >prot_H-canaliculatus_F_contig10027.62.1 ID=prot_H-canaliculatus_F_contig10027.62.1|Name=mRNA_H-canaliculatus_F_contig10027.62.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=133bp
PTCGVDGPTERIGADGSGWKRMEADRSGRTNGGAAATVAAACIGVHRPSR
RPSLSQQLGVQPCRVARQPWSLSRHVSAPSDLSISRSAETHPTVSSTQVQ
MGPCVPFPFFGRDFLRSGVSRRRRLRDRGKPCV back to topmRNA from alignment at H-canaliculatus_F_contig10027:3211..3610+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10027.62.1 ID=mRNA_H-canaliculatus_F_contig10027.62.1|Name=mRNA_H-canaliculatus_F_contig10027.62.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=400bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10027:3211..3610+ (Hapterophycus canaliculatus Oshoro5f female)
CCGACTTGTGGAGTTGATGGACCGACCGAGCGGATCGGAGCGGATGGAAG
CGGATGGAAGCGGATGGAAGCGGATCGGAGCGGAAGAACTAACGGTGGTG
CCGCCGCTACGGTAGCGGCCGCGTGCATCGGGGTGCATCGACCGTCTCGC
CGCCCGTCCTTGTCTCAACAACTCGGCGTACAACCTTGCCGCGTAGCTCG
CCAGCCTTGGTCTCTCAGCAGGCATGTAAGTGCCCCGAGCGATTTGTCCA
TCTCGCGGTCGGCAGAAACACATCCAACGGTTTCAAGTACACAAGTACAA
ATGGGACCTTGCGTTCCCTTTCCCTTCTTTGGACGCGACTTCCTCCGCTC
GGGGGTGAGCAGGCGCCGTAGGCTCCGTGATCGCGGGAAGCCATGCGTGC
back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10027:3211..3610+ >mRNA_H-canaliculatus_F_contig10027.62.1 ID=mRNA_H-canaliculatus_F_contig10027.62.1|Name=mRNA_H-canaliculatus_F_contig10027.62.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=798bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10027:3211..3610+ (Hapterophycus canaliculatus Oshoro5f female)
CCGACTTGTGGAGTTGATGGACCGACCGAGCGGATCGGAGCGGATGGAAG
CGGATGGAAGCGGATGGAAGCGGATCGGAGCGGAAGAACTAACGGTGGTG
CCGCCGCTACGGTAGCGGCCGCGTGCATCGGGGTGCATCGACCGTCTCGC
CGCCCGTCCTTGTCTCAACAACTCGGCGTACAACCTTGCCGCGTAGCTCG
CCAGCCTTGGTCTCTCAGCAGGCATGTAAGTGCCCCGAGCGATTTGTCCA
TCTCGCGGTCGGCAGAAACACATCCAACGGTTTCAAGTACACAAGTACAA
ATGGGACCTTGCGTTCCCTTTCCCTTCTTTGGACGCGACTTCCTCCGCTC
GGGGGTGAGCAGGCGCCGTAGGCTCCGTGATCGCGGGAAGCCATGCGTGC
CGACTTGTGGAGTTGATGGACCGACCGAGCGGATCGGAGCGGATGGAAGC
GGATGGAAGCGGATGGAAGCGGATCGGAGCGGAAGAACTAACGGTGGTGC
CGCCGCTACGGTAGCGGCCGCGTGCATCGGGGTGCATCGACCGTCTCGCC
GCCCGTCCTTGTCTCAACAACTCGGCGTACAACCTTGCCGCGTAGCTCGC
CAGCCTTGGTCTCTCAGCAGGCATGTAAGTGCCCCGAGCGATTTGTCCAT
CTCGCGGTCGGCAGAAACACATCCAACGGTTTCAAGTACACAAGTACAAA
TGGGACCTTGCGTTCCCTTTCCCTTCTTTGGACGCGACTTCCTCCGCTCG
GGGGTGAGCAGGCGCCGTAGGCTCCGTGATCGCGGGAAGCCATGCGTG back to top
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