Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 316 |
| Cds size | 309 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928625.440944-UTR-H-canaliculatus_F_contig10:72419..72425 | 1622928625.440944-UTR-H-canaliculatus_F_contig10:72419..72425 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10 72420..72425 + |
| 1696845498.846419-UTR-H-canaliculatus_F_contig10:72419..72425 | 1696845498.846419-UTR-H-canaliculatus_F_contig10:72419..72425 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10 72420..72425 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928625.4586928-CDS-H-canaliculatus_F_contig10:72425..72734 | 1622928625.4586928-CDS-H-canaliculatus_F_contig10:72425..72734 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10 72426..72734 + |
| 1696845498.8776138-CDS-H-canaliculatus_F_contig10:72425..72734 | 1696845498.8776138-CDS-H-canaliculatus_F_contig10:72425..72734 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10 72426..72734 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10.20.1 >prot_H-canaliculatus_F_contig10.20.1 ID=prot_H-canaliculatus_F_contig10.20.1|Name=mRNA_H-canaliculatus_F_contig10.20.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=103bp
MKTWTREGTRRVGAKTLHLLRTLFCGRSTCRRKRFRWPNASGSCPRGPKL
ERARHSKRATHARMGAHSWHFASIAQHATNHTTPSSNGQTCRLSPSRPRG
CEF back to topmRNA from alignment at H-canaliculatus_F_contig10:72420..72734+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10.20.1 ID=mRNA_H-canaliculatus_F_contig10.20.1|Name=mRNA_H-canaliculatus_F_contig10.20.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=315bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10:72420..72734+ (Hapterophycus canaliculatus Oshoro5f female)
CTGCACATGAAGACGTGGACTCGGGAAGGAACACGCCGGGTCGGAGCAAA
AACACTGCACTTGCTGCGGACGTTGTTTTGTGGTCGGAGCACATGTCGAC
GCAAGAGATTCAGGTGGCCCAACGCAAGCGGGTCATGTCCTCGTGGTCCA
AAGCTCGAACGAGCTCGACATTCCAAAAGGGCAACGCACGCGCGTATGGG
CGCTCACTCATGGCATTTTGCGTCTATTGCACAGCACGCAACGAATCATA
CAACTCCAAGTTCGAATGGACAAACCTGTCGTCTATCTCCATCCCGTCCG
CGGGGCTGCGAGTTT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10:72420..72734+ >mRNA_H-canaliculatus_F_contig10.20.1 ID=mRNA_H-canaliculatus_F_contig10.20.1|Name=mRNA_H-canaliculatus_F_contig10.20.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10:72420..72734+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAGACGTGGACTCGGGAAGGAACACGCCGGGTCGGAGCAAAAACACT
GCACTTGCTGCGGACGTTGTTTTGTGGTCGGAGCACATGTCGACGCAAGA
GATTCAGGTGGCCCAACGCAAGCGGGTCATGTCCTCGTGGTCCAAAGCTC
GAACGAGCTCGACATTCCAAAAGGGCAACGCACGCGCGTATGGGCGCTCA
CTCATGGCATTTTGCGTCTATTGCACAGCACGCAACGAATCATACAACTC
CAAGTTCGAATGGACAAACCTGTCGTCTATCTCCATCCCGTCCGCGGGGC
TGCGAGTTTATGAAGACGTGGACTCGGGAAGGAACACGCCGGGTCGGAGC
AAAAACACTGCACTTGCTGCGGACGTTGTTTTGTGGTCGGAGCACATGTC
GACGCAAGAGATTCAGGTGGCCCAACGCAAGCGGGTCATGTCCTCGTGGT
CCAAAGCTCGAACGAGCTCGACATTCCAAAAGGGCAACGCACGCGCGTAT
GGGCGCTCACTCATGGCATTTTGCGTCTATTGCACAGCACGCAACGAATC
ATACAACTCCAAGTTCGAATGGACAAACCTGTCGTCTATCTCCATCCCGT
CCGCGGGGCTGCGAGTTT back to top
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