prot_H-paniculata_contig19649.4997.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19649.4997.1
Unique Nameprot_H-paniculata_contig19649.4997.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5K9P3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P3_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.040e-17
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 ASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQG 90
            AS ++VVLKK+   RTT N++ LN+++++   PLP +D     L   + + I DL + F QI     ++PLTAFC P+ L+EWLR PQG
Sbjct:   50 ASPLVVVLKKDGSVRTTVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLRMPQG 138          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 7.210e-17
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGT 91
            ++S ++V+ KK+   R T N+  LN +  ++QLP+P +DD   +L     Y + D+ + F QI V + +IPLTAF   SGL+EWL+ PQG+
Sbjct:  308 YSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGS 398          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5K7H7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.230e-16
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQG 90
            ++S ++V+ KK+   R T N   LN +  ++QLP+P +DD   +L     Y ++D+ + F QI V + +IPLTAF   SGL+EWL+ PQG
Sbjct:  145 YSSPLVVIPKKSGGVRITVNCRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLLDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQG 234          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.770e-16
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    5 VIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGT 91
            ++V+ KK+   R T N   LN +  ++QLP+P +DD  A+L   + Y + D+ + F QI V + +IPLTAF   SGL+EWL+ PQG+
Sbjct:  213 LVVIPKKSGGLRITVNNRKLNKLCALSQLPIPRVDDTLAKLLKGKIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGS 299          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5JDP0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP0_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.400e-16
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGT 91
            ++S ++V+ KK+   R T N+  LN +  ++QLP+P +DD +  L     Y + D+ + F QI V + +IPLTAF   SGL+EWL+ PQG+
Sbjct:  408 YSSPLVVIPKKSGGIRITVNYRKLNKLCALSQLPIPRVDDTWDNLLKGRIYFLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGS 498          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5L5J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.470e-16
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    2 ASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQG 90
            AS ++V+ KK+   R T N++ LN+++++   PLP +DD    L   + + I DL + F QI+  + ++PLTAFC P+ L+EWLR PQG
Sbjct:   26 ASPLLVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDDILDFLYTGKVFSIFDLNSAFHQIESDEDTVPLTAFCTPTQLFEWLRMPQG 114          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5JSG5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG5_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.490e-16
Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    1 HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGTV 92
            ++S ++V+ KK+   R T N+  LN +  ++QLP+P +DD   +L     Y + D+ + F QI V + +IPLTAF   SGL+EWL+ PQG +
Sbjct:   33 YSSPLVVIPKKSCGVRITVNYCKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGGI 124          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5L4V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 6.130e-16
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 ASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQG 90
            AS ++V+LKK+   R T N++ LN+++++   PLP +D     L   + + I DL + F QI   + ++PLTAFC P+ L+EWLR PQG
Sbjct:   94 ASPLVVILKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQG 182          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 8.740e-16
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    2 ASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQG 90
            AS V+V+ KK    R T N++ LN+++++   PLP +D     L   + + I DL + F QI   K ++PLTAFC P+ L+EWLR PQG
Sbjct:  745 ASPVVVIPKKEGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDKDTVPLTAFCTPTQLFEWLRMPQG 833          
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Match: A0A6H5JV14_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV14_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 9.620e-16
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREAYPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGT 91
            ++S ++V+ KK+     T N+  LN +  ++QLP+P +DD   +L     Y + D+ + F QI V + +I LTAF   SGL+EWL+ PQG+
Sbjct:   46 YSSPLVVIPKKSGGVHITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRETIHLTAFVTSSGLFEWLKMPQGS 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19649.4997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9P3_9PHAE2.040e-1743.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JUZ4_9PHAE7.210e-1740.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7H7_9PHAE1.230e-1641.11NADAR domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K248_9PHAE1.770e-1642.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JDP0_9PHAE2.400e-1640.66Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L5J9_9PHAE4.470e-1641.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSG5_9PHAE4.490e-1640.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L4V5_9PHAE6.130e-1641.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVW3_9PHAE8.740e-1642.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV14_9PHAE9.620e-1638.46Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 2..91
e-value: 2.0E-20
score: 75.0
NoneNo IPR availableGENE3D3.30.70.270coord: 33..60
e-value: 2.0E-20
score: 75.0
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19649contigH-paniculata_contig19649:361..663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19649.4997.1mRNA_H-paniculata_contig19649.4997.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19649 361..663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19649.4997.1 ID=prot_H-paniculata_contig19649.4997.1|Name=mRNA_H-paniculata_contig19649.4997.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
HASLVIVVLKKNDKHRTTCNFENLNSVMEIAQLPLPHIDDQFARLGDREA
YPIIDLMTGFFQIDVKKHSIPLTAFCAPSGLYEWLRAPQGTVVCLDILNV
*
back to top