mRNA_H-paniculata_contig1961.4983.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.440e-59 Identity = 106/210 (50.48%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRPDPAPDFDGKIGIWCVCVTKQAQRIS----------ARREWGK-------------QYEFDVTLDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLV 603
VH++E+ FYL+R++++V +F GE G +V ++H+P++M I A +RPDPA DFDGKIGIW +CV + AQR S R W + +YEFD T+DAEWY++W D LPA+KEKMPWL + VV QQD A+P+TGK P LN G GW V LVTQPAQSP LNINDL FASLK RVW ID LV
Sbjct: 155 VHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: A0A6A4B6L5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B6L5_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.260e-32 Identity = 84/264 (31.82%), Postives = 139/264 (52.65%), Query Frame = 1
Query: 34 FQAVHVNEARFYLIRDRDRVHIFLGEKRVGSTK-----VLDKNHIPRVMFICAVSRPDPAPDFDGKIGIWCVCVTKQAQRISARREWGKQYEFDVTLDAEWYQEWCKDSFLPALKEKMPWLE-GEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAA 807
++ VH++E FY+ + V+I G+ V S + V K HI +VMF+CAV+RP D+DGK+GIW V + QR S R G VT+ E Y++ + +PA+KEK P + G + QQD A P+ ++ + G GW + + QPAQSP LN DL FF+S+++ + R + L++ ++ + A L + + +L +++K G N +++ H K + AG LP ++ D +A+ +A
Sbjct: 26 YEVVHLDEKWFYMKKVGKHVYILTGKDDVPSEEPSVQFVQSKQHIKKVMFLCAVARP--RGDWDGKVGIWPVVKNYRTQRWSRNRPAGIDEVHPVTMTREIYRDMLINDVIPAIKEKWPQAQKGIPIRLQQDNAKPHVLENDAAVI-AAGCSNGWTMYPLNQPAQSPDLNCLDLSFFSSIQSLQSQTRPRTTEDLIEEVEYAFHETSADTLNKTFLTLQSVMLEIMKCGGSNTYKIPHLHKDKLRNAGKLPITLPCDVQAYWSA 286
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.960e-30 Identity = 87/265 (32.83%), Postives = 132/265 (49.81%), Query Frame = 1
Query: 34 FQAVHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRP----DPAPDFDGKIGIWCVCVTKQAQRISARREWGKQYEFDVTLDAEWYQEWCKDSFLPALKEKMPWLEGE---EVVTQQDEATPNTGKDTPRK-LNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNA 804
F+ +H++E FYL R + ++ GE ST KNH+ +VMF+CA +RP + FDGKIGIW V + A+R S R G +D E Y+ + LPA+ EK W G E+ Q+D A P+ K T R+ + GWN+ + TQP SP +N+ DL FF S+++ +++R ID L+ ++ +D L V+ SL L G N++++ H G+LP S+ D + NA
Sbjct: 263 FKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSK-SKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEK--WPRGSSTPEIFIQEDNAKPH--KATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICDPDRINA 522
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 122 bits (306), Expect = 2.020e-28 Identity = 79/263 (30.04%), Postives = 132/263 (50.19%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRP----DPAPDFDGKIGIWCVCVTKQAQRISARREWGKQYEFDVT-LDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAAVEW 816
VH++E FY+ + DR ++ L ++ K +I +VMF+CAVSRP + P +DGK+GI+ AQR S R+ G +T L+ E + +PA+K K P +E+ QQD ATP+ P + + G+ ++L+ QP SP NI DL FF ++++ ++ +D LV+ + Y+ L RV+ SL Q+L+ G N ++V H + + G LP +++D + +E+
Sbjct: 170 VHIDEKWFYMTKTSDRYYL-LPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDP-EFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLPNVLEVDEDLVREVLEY 430
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 122 bits (305), Expect = 5.200e-28 Identity = 82/264 (31.06%), Postives = 136/264 (51.52%), Query Frame = 1
Query: 34 FQAVHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRP--DPAPD--FDGKIGIWCVCVTKQAQRISARREWGK-QYEFDVTLDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAAV 810
+ +H++E F++ + R ++ L E+ K I +VMF+ A++RP P D +DGKIGI+ +AQR SA R G + + ++ E +E + LPA++ K P +E+ QQD A P+ + L E R+GG+ +N++ QPAQSP LNI DL FF ++++ + +D L++ ++ Y ++ + W L ++LK GGN+++ H KK G LP +V+I E N V
Sbjct: 232 YNMIHIDEKWFFMSKITQRFYL-LSEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVNDTV 493
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.270e-24 Identity = 78/258 (30.23%), Postives = 128/258 (49.61%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRPD----PAPDFDGKIGIWCVCVTKQAQRISARREWGKQYEFDVTLDAEWYQEWCKDSFLPALKEKMP--WLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAF 798
+H++E F+L +D+ ++ GE+ + S K+HIP++MF+ AV RP + FDGK+GI+ + A+R S + G T+ + Y + + LPA+ K P W + + QQD A P+ P +L G N+ LVTQPA SP LNI DL FFA+++T +R+ ID + + + + L+ VW SL ++ ++ G N +++H + + G LP S + F
Sbjct: 153 IHLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRW---KTLYIQQDGARPHCTDGCP-ELVASAASFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHMRKEALRKQGKLPLSSTLASNVF 405
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 108 bits (271), Expect = 1.660e-24 Identity = 75/253 (29.64%), Postives = 130/253 (51.38%), Query Frame = 1
Query: 64 FYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRP--DPAPD--FDGKIGIWCVCVTKQAQRISARREWGKQYEFDVTLDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKK-RQCAGSLPKSVKIDREAFNAA 807
FYL ++ R ++ E+ T V +KN+I +VMF+ AV+RP D +DGKIG+W V + A+R S R G +D + Y+ +P++K + W G+ V Q D A P+ D P + DGGW++++ QPA SP N+NDL FFAS+++ +++ I+ LV ++ Y+ + +++V+ +L + G N +++ H ++ R G LP S+ + ++ A
Sbjct: 25 FYLKKENQRFYLGTHEEPPHLT-VKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVK--VVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQLPHLSKEQLRMNNGLLPLSLTCNDNIYDKA 273
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: UPI0020096116 (uncharacterized protein LOC125197723 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020096116) HSP 1 Score: 110 bits (275), Expect = 2.040e-24 Identity = 74/263 (28.14%), Postives = 134/263 (50.95%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRPDPAPD----FDGKIGIWCVCVTKQAQRISARREWGKQYEFDV-TLDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAAVEW 816
VH++E FY+ + DR ++ L ++ K I +VMF+CAVSRP D FDGKIGI+ A+R S R G + +++ E +E + +PA+K K P +E+ QQD A P+ + + L G+ +L++QPA SP N+ DL FF ++++ + ID L+ + S ++ L V+ +L ++++L+ GGN++++ H ++ + LP S++++ ++E+
Sbjct: 101 VHIDEKWFYMTKASDRYYL-LPDEDEPYRSCKSKRFITKVMFMCAVSRPQFGTDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWPANASKEIYIQQDNAKPHLNS-SDSQFEALASSDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKVATNIDQLLGNVWSSFEELTPQTLNNVFLTLQSCFSKILEVHGGNNYKIPHLNKERLRRTVGLPTSLEVEENLVRESLEY 361
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: UPI001C27B5CF (uncharacterized protein LOC121800956 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27B5CF) HSP 1 Score: 107 bits (267), Expect = 1.600e-23 Identity = 72/263 (27.38%), Postives = 134/263 (50.95%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRPDPAPD----FDGKIGIWCVCVTKQAQRISARREWGKQYEFDV-TLDAEWYQEWCKDSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAAVEW 816
+H++E FY+ + DR ++ L ++ K I +VMF+CAVSRP D FD KIGI+ A+R S R G + +++ E +E + +PA+K K P +++ QQD A P+ + + +EL G+ +L++QPA SP N+ DL FF ++++ + ID L+ + S ++ L V+ +L +++L+ GGN++++ H ++ + LP S+++ + ++E+
Sbjct: 62 IHIDEKWFYMTKASDRYYL-LPDEDEPYRACKSKRFITKVMFMCAVSRPQFGTDGQTIFDDKIGIFSFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWPANASKDIYIQQDNAKPHL-RSFDSQFDELASSDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKVATNIDELLGNVWSSFEELTPQTLNNVFLTLQSCLSKILEVYGGNNYKIPHLNKERLRRTVGLPTSLEVGKNLVKESLEY 322
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 107 bits (267), Expect = 3.910e-23 Identity = 73/263 (27.76%), Postives = 124/263 (47.15%), Query Frame = 1
Query: 43 VHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHIPRVMFICAVSRP----DPAPDFDGKIGIWCVCVTKQAQRISARREWGKQYEFDVTLDAEWYQEWCK-DSFLPALKEKMPWLEGEEVVTQQDEATPNTGKDTPRKLNELGRDGGWNVNLVTQPAQSPVLNINDLVFFASLKTRVWRERYDIIDGLVQGIKSMYDAHDAPALERVWQSLFKQYNQVLKALGGNDFEVQHTETKKRQCAGSLPKSVKIDREAFNAAVEW 816
VH++E FY+ + DR ++ L ++ K +I +VMF+CAVSRP + +DGK+GI+ AQR S R G + + C +PA+K K P +++ QQD ATP+ P + + + G+++ L+ QP SP NI DL FF ++++ + +D LV + S + L +V+ SL ++L GGN ++V H + G LP +++D + + +
Sbjct: 132 VHIDEKWFYMTKVSDRYYL-LPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDP-EFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDRLHRNGGLPNVLEVDEDVVRDVLHY 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1961.4983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1961.4983.1 >prot_H-paniculata_contig1961.4983.1 ID=prot_H-paniculata_contig1961.4983.1|Name=mRNA_H-paniculata_contig1961.4983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp PQRNSITLRSDFQAVHVNEARFYLIRDRDRVHIFLGEKRVGSTKVLDKNHback to top mRNA from alignment at H-paniculata_contig1961:15106..15921- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1961.4983.1 ID=mRNA_H-paniculata_contig1961.4983.1|Name=mRNA_H-paniculata_contig1961.4983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=816bp|location=Sequence derived from alignment at H-paniculata_contig1961:15106..15921- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1961:15106..15921- >mRNA_H-paniculata_contig1961.4983.1 ID=mRNA_H-paniculata_contig1961.4983.1|Name=mRNA_H-paniculata_contig1961.4983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig1961:15106..15921- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |