prot_H-paniculata_contig1961.4981.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1961.4981.1
Unique Nameprot_H-paniculata_contig1961.4981.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length366
Homology
BLAST of mRNA_H-paniculata_contig1961.4981.1 vs. uniprot
Match: D7FM23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM23_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 5.760e-80
Identity = 167/291 (57.39%), Postives = 186/291 (63.92%), Query Frame = 0
Query:    1 MQSMMHPQAEWISTATRRSXXXXXXXXXXXXXXXXXXXXXXXXXX----------SAVAQEVSNPHRGSGGLVRGRAVFCLPPTAGWFQGHFAYAARGGCTASLGVLGTELPVDACMQCCHGGFSRFKVVFIHHE-----------------SGKEATLVVERYGGNMMCLHAEPIREGDGVXXXXXXXXXXXRGGEDHVTSEESDFAFQTHVMKADDDARPLLDRYFQAVVRAAADPA-----------------ELRECIVCIGPMDVPLSLLHELAAPIPDGARTQSM 247
            M S + P AEWIS ++RR XXXXXXXXXXXXXXXXX                    A  +E    HRGSGGLV GRAVFCLPP   WFQGHFAYAARGGCTASLGVLGTELPVD CMQCCHGGFSR+K+VFIHHE                 SGKE+ LVVERYGGNMM L+AEP                   GG D     ES+ +F THVMKADDDAR LL RYFQ++VRA++DP+                 EL++CIVCIG MDVPLSLL ELAAP+PD +RTQSM
Sbjct:    1 MSSTLLPSAEWISASSRRXXXXXXXXXXXXXXXXXXPPGAGHPTGIPPQPGSNDDDAHREERFVGHRGSGGLVHGRAVFCLPPGVEWFQGHFAYAARGGCTASLGVLGTELPVDPCMQCCHGGFSRYKLVFIHHEVKCGKRSDATLAFDGYMSGKESALVVERYGGNMMTLNAEP---------------SAVMGGGDGPVPPESELSFTTHVMKADDDARTLLGRYFQSIVRASSDPSPQAYSRYCRVTSSRVSKELQDCIVCIGAMDVPLSLLQELAAPLPD-SRTQSM 275          
BLAST of mRNA_H-paniculata_contig1961.4981.1 vs. uniprot
Match: W4GVP2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVP2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.600e-17
Identity = 55/176 (31.25%), Postives = 84/176 (47.73%), Query Frame = 0
Query:   63 VRGRAVFCLPPTAGWFQGHFAY------AARGGCTASLGVLGTELPVDACMQCCHGGFSRFKVVFIHHESGKEATLVVERYGGNMMCLHAEPIREGDGVXXXXXXXXXXXRGGEDHVTSEESDFAFQTHVMKADDDARPLLDRYFQAVVRAAADPAELRECIVCIGPMDVPLSLLH 232
            + GRA+ C P    WFQG+F Y         G    +LG+ G E+PVD C++CCHGG+  +K+  I +ES +EA++ V++ GG+   +        D              G   H         F+T  M AD+ A   + + F ++    ++  EL+ CIVCIG M +  S  H
Sbjct:    7 LEGRAMLCFPQGGEWFQGYFYYDEWSEEEEDGKQARTLGLFGVEVPVDDCVRCCHGGYREYKLTVIIYESQEEASMDVQKTGGDYCTIQLTDAAAVDAP------------GAYVH---------FETSSMLADESAVACIRQAFPSISAQCSNDLELQTCIVCIGHMFLGSSSTH 161          
BLAST of mRNA_H-paniculata_contig1961.4981.1 vs. uniprot
Match: A0A485K955_9STRA (Aste57867_3162 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K955_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.280e-13
Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   62 LVRGRAVFCLPPTAGWFQGHFAYAARGG--------CTASLGVLGTELPVDACMQCCHGGFSRFKVVFIHHESGKEATLVVERYGGNMMCL 144
            +  GR V C P  + WFQG+F YAA              +LG+L  E+PVD C++C HGG+  +K+  I++++ KEAT++V++ GG+   L
Sbjct:    1 MEEGRTVLCFPDGSEWFQGYF-YAASAAEDDDFMEKPPTALGLLAVEMPVDDCVRCRHGGYREYKMTIINYDTEKEATILVQKTGGDFCTL 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1961.4981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM23_ECTSI5.760e-8057.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W4GVP2_9STRA1.600e-1731.25Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A485K955_9STRA8.280e-1338.46Aste57867_3162 protein n=1 Tax=Aphanomyces stellat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1961contigH-paniculata_contig1961:4194..11813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1961.4981.1mRNA_H-paniculata_contig1961.4981.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1961 4119..11886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1961.4981.1 ID=prot_H-paniculata_contig1961.4981.1|Name=mRNA_H-paniculata_contig1961.4981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MQSMMHPQAEWISTATRRSSATTATHHPRHHDQQCQRQHDDRDDDSAVAQ
EVSNPHRGSGGLVRGRAVFCLPPTAGWFQGHFAYAARGGCTASLGVLGTE
LPVDACMQCCHGGFSRFKVVFIHHESGKEATLVVERYGGNMMCLHAEPIR
EGDGVGGGGGSASGSGRGGEDHVTSEESDFAFQTHVMKADDDARPLLDRY
FQAVVRAAADPAELRECIVCIGPMDVPLSLLHELAAPIPDGARTQSMVCS
AFGPCREGAYNHPPQPTKHTPLLSPAPPSEVDDNAVDNDNDHDHHSHSHA
HGHGNGCSRVTAGGGPLSCPVGGFGSSPEGGGRSGPVMANVGAGVGPGGP
GVNIDNADDWLQGTG*
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