prot_H-paniculata_contig196.4971.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig196.4971.1
Unique Nameprot_H-paniculata_contig196.4971.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: D7FSK9_ECTSI (Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSK9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 3.690e-30
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 MHLMYYSVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPPLEL 63
            MHLMYY  +GKRVYTLKK  P G LTESAHPARFSPDDKFS ARVANK RFGVLPTQQPP+ L
Sbjct:    1 MHLMYYLENGKRVYTLKKANPAGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQPPIIL 63          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: L8H2Y9_ACACA (Nucleolar protein 10 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2Y9_ACACA)

HSP 1 Score: 95.9 bits (237), Expect = 8.320e-25
Identity = 47/63 (74.60%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MHLMYY-SVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPPLE 62
            MHLMYY   DGKRVYTLKK  P+G  T SAHPARFSPDDKFS  RV  K RFG+LPTQQPP E
Sbjct:    1 MHLMYYLDKDGKRVYTLKKSNPEGTATVSAHPARFSPDDKFSRQRVTLKKRFGILPTQQPPRE 63          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A5B8MZ39_9CHLO (Nucleolar protein 10 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ39_9CHLO)

HSP 1 Score: 93.2 bits (230), Expect = 9.490e-24
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 MHLMYYSVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPP 60
            M+LMYY+ +GKRVYTLKK TP  + TESAHPARFSPDDK+S  RV  K RFG+LPTQ+PP
Sbjct:    1 MYLMYYTEEGKRVYTLKKVTPGDQPTESAHPARFSPDDKYSRERVTCKKRFGILPTQRPP 60          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A0G4J2C6_PLABS (Nucleolar protein 10 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2C6_PLABS)

HSP 1 Score: 92.8 bits (229), Expect = 1.350e-23
Identity = 44/61 (72.13%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 MHLMYYSVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPPL 61
            MHLMYY  DGKRVYTLKK  P G  T SAHPARFSPDDK+S  RV  K RFG+LPTQQ P+
Sbjct:    1 MHLMYYMEDGKRVYTLKKVDPRGMPTHSAHPARFSPDDKYSRERVTIKKRFGILPTQQAPI 61          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: K3WVP2_GLOUD (Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WVP2_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 5.790e-23
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MHLMYY-SVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQP 59
            MHLMYY   DGKRVYTLKK+ P GK T SAHPARFSPDDKFS  R+  K RFG+LPTQ P
Sbjct:    1 MHLMYYLGEDGKRVYTLKKEDPSGKPTHSAHPARFSPDDKFSKERIITKKRFGLLPTQTP 60          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A1C9ZPH2_9CHLO (Nucleolar protein 10 n=1 Tax=Ulva partita TaxID=1605170 RepID=A0A1C9ZPH2_9CHLO)

HSP 1 Score: 92.4 bits (228), Expect = 6.560e-23
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 MHLMYY-SVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPPLE 62
            M+LMYY   +GKRVYTL K+ PDGK T SAHPARFSPDDKFS  R+  K RFG+LPTQ+PP E
Sbjct:   45 MYLMYYLDAEGKRVYTLNKEAPDGKPTVSAHPARFSPDDKFSRERITLKKRFGILPTQRPPPE 107          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A2D4BWB9_PYTIN (Nucleolar protein 10 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWB9_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 8.640e-23
Identity = 44/60 (73.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MHLMYYS-VDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQP 59
            MHLMYY+  DGKRVYTLKK+ P GK T SAHPARFSPDDKFS  R+  K RFG+LPTQ P
Sbjct:   54 MHLMYYTGADGKRVYTLKKEDPTGKPTHSAHPARFSPDDKFSKERITTKKRFGLLPTQTP 113          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A1S8VWG1_9FUNG (H/ACA ribonucleoprotein complex subunit NOP10 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VWG1_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 1.140e-22
Identity = 46/60 (76.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MHLMYYSV-DGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQP 59
            MHLM+YS  DGKRVYTLKK TP G +T+SAHPARFSPDDKFS  RV  K RFGVL TQQP
Sbjct:    1 MHLMFYSAADGKRVYTLKKLTPTGGVTKSAHPARFSPDDKFSRHRVTLKKRFGVLLTQQP 60          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: D8UKQ0_VOLCA (Nucleolar protein 10 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UKQ0_VOLCA)

HSP 1 Score: 90.5 bits (223), Expect = 1.140e-22
Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    1 MHLMYYSVD-GKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQPPLEL 63
            M+LMYY  + G R+YTLKK  PDG  T+SAHPARFSPDDKFS  RV  K RFG+LPTQQPP EL
Sbjct:    1 MYLMYYEDESGDRIYTLKKIAPDGNPTKSAHPARFSPDDKFSRERVTCKKRFGLLPTQQPPPEL 64          
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Match: A0A3R7JD46_9STRA (Nucleolar protein 10 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JD46_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.170e-22
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MHLMYY-SVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIRFGVLPTQQP 59
            MHLMYY   DGKRVYTLKKQTP G  + SAHPARFSPDDKFS  R+  K RFG+LPTQ P
Sbjct:    1 MHLMYYIGDDGKRVYTLKKQTPTGAPSSSAHPARFSPDDKFSKERITTKKRFGLLPTQTP 60          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig196.4971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK9_ECTSI3.690e-3082.54Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879... [more]
L8H2Y9_ACACA8.320e-2574.60Nucleolar protein 10 n=1 Tax=Acanthamoeba castella... [more]
A0A5B8MZ39_9CHLO9.490e-2471.67Nucleolar protein 10 n=1 Tax=Chloropicon primus Ta... [more]
A0A0G4J2C6_PLABS1.350e-2372.13Nucleolar protein 10 n=1 Tax=Plasmodiophora brassi... [more]
K3WVP2_GLOUD5.790e-2373.33Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782... [more]
A0A1C9ZPH2_9CHLO6.560e-2369.84Nucleolar protein 10 n=1 Tax=Ulva partita TaxID=16... [more]
A0A2D4BWB9_PYTIN8.640e-2373.33Nucleolar protein 10 n=2 Tax=Pythium insidiosum Ta... [more]
A0A1S8VWG1_9FUNG1.140e-2276.67H/ACA ribonucleoprotein complex subunit NOP10 n=1 ... [more]
D8UKQ0_VOLCA1.140e-2270.31Nucleolar protein 10 n=1 Tax=Volvox carteri f. nag... [more]
A0A3R7JD46_9STRA1.170e-2273.33Nucleolar protein 10 n=3 Tax=Phytophthora kernovia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 5..51
e-value: 1.2E-18
score: 66.9
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..61
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilyGENE3D2.20.28.40coord: 6..54
e-value: 2.9E-8
score: 35.4
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig196contigH-paniculata_contig196:17761..21436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig196.4971.1mRNA_H-paniculata_contig196.4971.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig196 17748..22366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig196.4971.1 ID=prot_H-paniculata_contig196.4971.1|Name=mRNA_H-paniculata_contig196.4971.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MHLMYYSVDGKRVYTLKKQTPDGKLTESAHPARFSPDDKFSAARVANKIR
FGVLPTQQPPLEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007264H/ACA_rnp_Nop10
IPR036756H/ACA_rnp_Nop10_sf