prot_H-paniculata_contig1957.4957.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1957.4957.1
Unique Nameprot_H-paniculata_contig1957.4957.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length423
Homology
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: D8LH45_ECTSI (Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH45_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 9.130e-114
Identity = 228/359 (63.51%), Postives = 248/359 (69.08%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLKAAAARREK------GAAAGSVSFDDAMIAKIQFGGEPTVRRLSDGEDSDNEALEKMSRNLGDPLTVARGKGNAKGNKHAKGKGIVVDGSSLSSLFATGVSTASGNPRLKEGLALSNGGEGGAPVPSQAGGXXXXXXXXXXXXXXXXXXTPGSLLVSGIEAAARREAEKSKPGAEGSIGTKILAK 353
            MGERKVL KYFPPDFDPKKVPRLKRDP KQIGVRMMIPFSMQCNTCGEFMY RGKKFNSLKEDCIGEDY+ I++FRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATE+ HK+ REEEEKSDNMKQLENRTLDSKIE+EIMDALDEIKAVNRRHETV+T +VLKA+AARR K      GA AG  +  DAMIA IQFGG   VRRL D ++ +++         GD  T A G      +K  KG                                                 XXXXXXXXXXXXXX    + GS LVS IEA ARREAE  K    GS+GTK++ K
Sbjct:    1 MGERKVLCKYFPPDFDPKKVPRLKRDPEKQIGVRMMIPFSMQCNTCGEFMY-RGKKFNSLKEDCIGEDYLTIRRFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEKEHKEAREEEEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHETVNTEDVLKASAARRNKSVGDKGGAGAGENAEVDAMIANIQFGGSK-VRRLVDADEDNSDGA-------GDTATEANGTNPP--SKSFKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXKKADSAGSALVSAIEAQARREAEAMKAAVAGSVGTKVVVK 338          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A835Z1Z4_9STRA (Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z4_9STRA)

HSP 1 Score: 249 bits (637), Expect = 4.000e-76
Identity = 138/235 (58.72%), Postives = 164/235 (69.79%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLKAAAARREKGAAAGSVSFDD-----------AMIAKIQFG----GEPTVRRLSDGEDSDNE 220
            MGERKVLNKYFPPDFDP K+PR++R    Q+ VRMM+PF++QC  C EFMY RGKKFNS KEDC GEDY GI+KFRFYIKC+ C+QEITFKTDPE  DYELE GA+RNFESW + +A E      R  E+K+D MK LENRTLDSKIEM+I+DALDEI+AVN+RHE VDTA +L++ A  +                        A+I  I+FG    G   VRRLSD E S +E
Sbjct:    1 MGERKVLNKYFPPDFDPSKIPRMRRGKNHQVEVRMMLPFTIQCTVCSEFMY-RGKKFNSKKEDCEGEDYKGIRKFRFYIKCITCNQEITFKTDPEHADYELEVGATRNFESWRETEAAETKAVAARAAEDKNDPMKALENRTLDSKIEMDILDALDEIRAVNKRHERVDTAAILESRARSQXXXXXXXXXXXXXXXXXXXXXXXXALIKSIKFGARTAGAAAVRRLSDSEGSGDE 234          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A1W0A1I0_9STRA (Splicing factor YJU2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1I0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.430e-72
Identity = 122/174 (70.11%), Postives = 140/174 (80.46%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVL 174
            MGERKVLNKYFPPDFDP K+PR K+   KQI VRMM+PFS+QC TCGE+MY RGKKFNS KED + EDY GIK FRFYI+CV C+ EITFKTDP+ GDY  E G  RNFE W + +A +E   KEREEEEK D+MKQLENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPSKIPRRKQPKNKQIEVRMMLPFSIQCATCGEYMY-RGKKFNSRKEDVLEEDYHGIKIFRFYIRCVTCASEITFKTDPQHGDYVAEHGCQRNFEPWRENEANDEKMLKEREEEEKGDSMKQLENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A024UUI7_9STRA (Splicing factor YJU2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUI7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.290e-71
Identity = 121/174 (69.54%), Postives = 140/174 (80.46%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVL 174
            MGERKVLNKYFPPDFDP+ +PR K    KQI VRMM+PFS+QCNTCGEFMY +GKKFNS KED + EDY G+K FRFYI+C +CS EITFKTDP+ GDY  E G  RNFE W +++A E A  KEREEEEK D+MK LENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNTCGEFMY-QGKKFNSRKEDVLDEDYFGVKIFRFYIRCSMCSSEITFKTDPKNGDYATEHGCKRNFEQWREREADEAAILKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDAIL 173          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A2D4C0T0_PYTIN (Splicing factor YJU2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0T0_PYTIN)

HSP 1 Score: 236 bits (601), Expect = 1.760e-71
Identity = 121/175 (69.14%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLK 175
            MGERKVLNKYFPPDFDP  VPR KR   +QI VRMM+PFS+QC TCGE+MY RGKKFNS KED + E+Y+GI+ FRFYIKCV CS EITFKTDP+ GDY  E G  RNFE W +K+A EEA  K+RE+EEK D MK LENRTLDSK EM+I+DALDEIKA+N+RH  +DT ++L+
Sbjct:    1 MGERKVLNKYFPPDFDPSIVPRRKRPKNQQIEVRMMLPFSIQCATCGEYMY-RGKKFNSRKEDVVEENYLGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKEAAEEAAMKQREDEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKIDTDQLLQ 174          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A485KX06_9STRA (Splicing factor YJU2 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KX06_9STRA)

HSP 1 Score: 234 bits (597), Expect = 5.440e-71
Identity = 120/175 (68.57%), Postives = 141/175 (80.57%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLK 175
            MGERKVLNKYFPPDFDP+ +PR K    KQI VRMM+PFS+QCN CGEFMY +GKKFNS KED + EDY G+K FRFYI+C +CS EITFKTDP+ GDY  E G  RNFE+W D++A  +A  KEREEEEK D+MK LENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L+
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNACGEFMY-QGKKFNSRKEDVLDEDYFGVKIFRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEAWRDREADAQAVLKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDALLQ 174          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: W4H735_9STRA (Splicing factor YJU2 n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H735_9STRA)

HSP 1 Score: 233 bits (595), Expect = 8.990e-71
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVL 174
            MGERKVLNKYFPPDFDP+ +PR K    KQI VRMM+PFS+QCN CGEFMY +GKKFNS KED + EDY G+K FRFYI+C +CS EITFKTDP+ GDY  E G  RNFE W +++A E A  KEREEEEK D+MK LENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNACGEFMY-QGKKFNSRKEDVMDEDYFGVKIFRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEQWREREADEAAILKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDAIL 173          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A1V9Y4X5_9STRA (Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4X5_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.780e-70
Identity = 120/174 (68.97%), Postives = 138/174 (79.31%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVL 174
            MGERKVLNKYFPPDFDP  +PR K+    QI VRMM+PFS+QC+TCGE+MY RGKKFNS KED + EDY GIK FRFYI+C+ C+ EITFKTDP+ GDY  E G  RNFE W +K A EE   KEREEEEK D+MK LENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKQPKNMQIEVRMMLPFSIQCSTCGEYMY-RGKKFNSRKEDVLEEDYHGIKIFRFYIRCITCASEITFKTDPQHGDYVAEHGCQRNFEPWREKDADEEKMLKEREEEEKGDSMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A8K1C367_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C367_PYTOL)

HSP 1 Score: 233 bits (593), Expect = 2.940e-70
Identity = 120/175 (68.57%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLK 175
            MGERKVLNKYFPPDFDP  +PR KR   +QI VRMM+PFS+QC TCGE+MY RGKKFNS KED + EDY GI+ FRFYIKCV CS EITFKTDP+ GDY  E G  RNFE W +K A EEA  K++E+EEK D MK LENRTLDSK EM+I+DALDEIKA+N+RH  +DT  +L+
Sbjct:    1 MGERKVLNKYFPPDFDPSIIPRRKRPKNQQIEVRMMLPFSIQCATCGEYMY-RGKKFNSRKEDVVEEDYFGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKDAEEEAALKQKEDEEKGDAMKVLENRTLDSKREMDILDALDEIKAINQRHSKIDTDALLQ 174          
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Match: A0A067CXR5_SAPPC (Splicing factor YJU2 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A067CXR5_SAPPC)

HSP 1 Score: 229 bits (583), Expect = 2.250e-69
Identity = 121/183 (66.12%), Postives = 141/183 (77.05%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFMYSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEMEIMDALDEIKAVNRRHETVDTAEVLKAAAARREK 183
            MGERKVLNKYFPPDFDP  +PR K+    QI VRMM+PFS+QC+TCGE+MY RGKKFNS KED + EDY GIK FRFYI+C+ C+ EITFKTDP+ GDY  E G  RNFE W +  A E A  KEREEEEK D+MK LENRTLDSK EM+I+DALDEIKA+N+RH  VDT  +L   A+  E+
Sbjct:    1 MGERKVLNKYFPPDFDPALMPRRKQPKNMQIEVRMMLPFSIQCSTCGEYMY-RGKKFNSRKEDVLEEDYHGIKIFRFYIRCITCASEITFKTDPQHGDYAAEHGCQRNFEPWRETDADEAAVLKEREEEEKGDSMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDALLAKVASSGEQ 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1957.4957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH45_ECTSI9.130e-11463.51Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z1Z4_9STRA4.000e-7658.72Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID... [more]
A0A1W0A1I0_9STRA4.430e-7270.11Splicing factor YJU2 n=1 Tax=Thraustotheca clavata... [more]
A0A024UUI7_9STRA1.290e-7169.54Splicing factor YJU2 n=1 Tax=Aphanomyces invadans ... [more]
A0A2D4C0T0_PYTIN1.760e-7169.14Splicing factor YJU2 n=2 Tax=Pythium insidiosum Ta... [more]
A0A485KX06_9STRA5.440e-7168.57Splicing factor YJU2 n=2 Tax=Aphanomyces TaxID=100... [more]
W4H735_9STRA8.990e-7168.97Splicing factor YJU2 n=5 Tax=Aphanomyces astaci Ta... [more]
A0A1V9Y4X5_9STRA2.780e-7068.97Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID... [more]
A0A8K1C367_PYTOL2.940e-7068.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CXR5_SAPPC2.250e-6966.12Splicing factor YJU2 n=3 Tax=Eukaryota TaxID=2759 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availablePANTHERPTHR12111:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 94coord: 1..385
IPR007590Saf4/Yju2 proteinPFAMPF04502DUF572coord: 9..411
e-value: 2.3E-74
score: 251.0
IPR007590Saf4/Yju2 proteinPANTHERPTHR12111CELL CYCLE CONTROL PROTEIN CWF16-RELATEDcoord: 1..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1957contigH-paniculata_contig1957:3186..19782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1957.4957.1mRNA_H-paniculata_contig1957.4957.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1957 3031..19782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1957.4957.1 ID=prot_H-paniculata_contig1957.4957.1|Name=mRNA_H-paniculata_contig1957.4957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=423bp
MGERKVLNKYFPPDFDPKKVPRLKRDPLKQIGVRMMIPFSMQCNTCGEFM
YSRGKKFNSLKEDCIGEDYVGIKKFRFYIKCVICSQEITFKTDPEKGDYE
LETGASRNFESWTDKQATEEAHKKEREEEEKSDNMKQLENRTLDSKIEME
IMDALDEIKAVNRRHETVDTAEVLKAAAARREKGAAAGSVSFDDAMIAKI
QFGGEPTVRRLSDGEDSDNEALEKMSRNLGDPLTVARGKGNAKGNKHAKG
KGIVVDGSSLSSLFATGVSTASGNPRLKEGLALSNGGEGGAPVPSQAGGG
AEDSKGDASSGGGGDSSTPGSLLVSGIEAAARREAEKSKPGAEGSIGTKI
LAKRKKLDKPNDRKKKHKKSKNKSKIKGKDGSKEKSASAGEVASGSGGGL
GSLLGFYASSSSSSDADEESKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007590Saf4/Yju2