mRNA_H-paniculata_contig1931.4879.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1931.4879.1
Unique NamemRNA_H-paniculata_contig1931.4879.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A6H5J694_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J694_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.910e-55
Identity = 88/123 (71.54%), Postives = 103/123 (83.74%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WLLE ELQRLVLVIVGTDSG+TLERWTFNVH+EERP L DGSN    + PRKS K I  EI+++IRQIT+SVTFLP+L EPC+FDLLVY   DA VP+ W++SDP+ IKDSSEV LRSF+TK+
Sbjct:   78 WLLEKELQRLVLVIVGTDSGDTLERWTFNVHKEERPALKDGSN-AGDQQPRKSQKAITQEIQNVIRQITSSVTFLPLLDEPCSFDLLVYTGNDATVPSGWDDSDPRCIKDSSEVSLRSFSTKI 199          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A836CIY9_9STRA (DNA-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.710e-45
Identity = 81/124 (65.32%), Postives = 94/124 (75.81%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPV-LTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            W+L  E+QRLVLVI G +SGE LERW F+V  E  P  L + S N    APRKS K I  EI+ IIRQITASVTFLP+LSEPCAFDLLVY N  A VP +WEESDP++I DSS+V+LRSF+TKV
Sbjct:   84 WMLRDEVQRLVLVISGVESGEALERWAFHVQGEPAPAPLKEASGNAP--APRKSQKDICNEIQAIIRQITASVTFLPLLSEPCAFDLLVYTNKSATVPIQWEESDPRYIADSSQVKLRSFSTKV 205          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A5A8DN77_CAFRO (HORMA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN77_CAFRO)

HSP 1 Score: 144 bits (364), Expect = 2.950e-41
Identity = 72/123 (58.54%), Postives = 94/123 (76.42%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WLLE ++Q+LV+VI G DSGETLERW FN+  + +  +T G ++       K +K+IQ EI  IIRQITASV+FLP+LSEPCAFDLLVY + DA VP  WE+SDP++IKD  +++LRSFTT+V
Sbjct:   78 WLLEGKVQKLVVVITGADSGETLERWVFNISPD-KAAVTGGKSSD------KPLKEIQQEIAGIIRQITASVSFLPLLSEPCAFDLLVYTDPDAVVPRAWEDSDPRYIKDGEDMQLRSFTTRV 193          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S4MXW1_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MXW1_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 3.030e-40
Identity = 75/123 (60.98%), Postives = 89/123 (72.36%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WL +  +Q+LVLV+ G DSGETLERW F+V        TD S  P  +A  K  K+I  EI+ IIRQITASVTFLP+L EPC FD+LVY +TD +VP  WEESDPK+I +S EVRLRSFTTKV
Sbjct:   68 WLGQGTVQKLVLVVAGQDSGETLERWVFDVE-------TDKSIGPDGKAE-KPEKEIMSEIQAIIRQITASVTFLPLLDEPCTFDMLVYTDTDIQVPKAWEESDPKYITNSDEVRLRSFTTKV 182          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S1G3K4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3K4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.380e-40
Identity = 74/123 (60.16%), Postives = 87/123 (70.73%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WL   E+Q+LV+VI G DSG+ LERW FNV        TD S   S     KS K+IQ EI+ IIRQITASV+FLP+L EPC FDLLVY + D  VP  WEESDP++I +S+EVRLRSFTTKV
Sbjct:   78 WLSRGEVQKLVVVITGVDSGDVLERWVFNVE-------TDKSITASGGGVEKSAKEIQKEIQAIIRQITASVSFLPLLDEPCTFDLLVYTDADTDVPRSWEESDPQYISNSTEVRLRSFTTKV 193          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A2R5FZ78_9STRA (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZ78_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.920e-40
Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WL+E  +Q+LVLVI G +S E LERW FNV  ++    T    NP  EA +K  K+I  EI+ IIRQITASVTFLP+L+EPC FDLLV+ + D +VP  WEESDP+HI D+++V+LRSFTTK+
Sbjct:   75 WLMEGTVQKLVLVITGVESKEVLERWVFNVEADKSVTAT---GNP-LEAKQKPRKEIMNEIQAIIRQITASVTFLPLLNEPCTFDLLVHTDCDTEVPQTWEESDPRHIADATDVKLRSFTTKI 193          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A6T8FYY7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FYY7_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.050e-40
Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREER-------------PVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WLLE  +QRLV+V+ G DSGETLERW FNV  E +             P  +  S  P+ +  +KS+++I  EI+ IIRQ+TASVTFLP+L+EPC+FDLLVY +  A VPT+W+ESDP++I +S EV+LRSFTT V
Sbjct:   56 WLLEGNVQRLVVVVTGIDSGETLERWQFNVCVENKDDEAGFGKGDENLPQNSSASRKPTDQ--KKSIREIHNEIQAIIRQVTASVTFLPLLNEPCSFDLLVYTDKSAVVPTKWQESDPRYIMNSQEVKLRSFTTTV 189          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A7S2R2B9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2B9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.060e-39
Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVH--REERPVLTDGS----------NNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WL++  +QRLV+V+ G DSGETLERW FNV    +E    +D S          +N +T    KS+K+I  EI+ IIRQITASVTFLP+L+EPC+FDLLVYA+ DA VP +W++SDP++I +S EV+LRSFTT V
Sbjct:   75 WLIDGNVQRLVVVVTGLDSGETLERWQFNVSVDGDETKGASDNSQPGDENSSGVSNVTTNKSGKSIKQIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYADMDAVVPKKWQDSDPQYIMNSQEVKLRSFTTSV 209          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: A0A812XQS1_9DINO (MAD2L1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XQS1_9DINO)

HSP 1 Score: 140 bits (353), Expect = 2.360e-39
Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WL    +Q+LV+VI G +SG+TLERW FN+  + + V  DG   P  E   KS+K+IQ EI+ +IRQITA+VTFLP+L EPCAFDLLVY + +A+VP  WEESDP++I +S+EVRLRSFTTKV
Sbjct:   99 WLTLGSIQKLVVVINGIESGDTLERWVFNIETD-KGVKADG---PGKE---KSLKEIQAEIQAVIRQITATVTFLPLLDEPCAFDLLVYTDKEAEVPKTWEESDPQYIVNSTEVRLRSFTTKV 214          
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Match: M4C3C3_HYAAE (HORMA domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=M4C3C3_HYAAE)

HSP 1 Score: 139 bits (350), Expect = 3.650e-39
Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 1
Query:    1 WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAPRKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEWEESDPKHIKDSSEVRLRSFTTKV 369
            WLL+ E+Q+LVLVI G ++ E +ERW F VH E    +  G    S     KS K+I  EI+ IIRQITASV+FLP+L E CAFDLLVY + +++VP  WEESDP++IKDS+EVRLRSF+TKV
Sbjct:   75 WLLKGEVQKLVLVITGIETQEVVERWAFEVHAENGGTIDSGGAPTS-----KSKKEIMAEIQAIIRQITASVSFLPLLEEQCAFDLLVYTDKNSEVPPLWEESDPRYIKDSAEVRLRSFSTKV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1931.4879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J694_9PHAE5.910e-5571.54HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIY9_9STRA4.710e-4565.32DNA-binding protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A5A8DN77_CAFRO2.950e-4158.54HORMA domain-containing protein n=3 Tax=Cafeteria ... [more]
A0A7S4MXW1_9EUKA3.030e-4060.98Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S1G3K4_9STRA3.380e-4060.16Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5FZ78_9STRA4.920e-4057.72Mitotic spindle assembly checkpoint protein MAD2A ... [more]
A0A6T8FYY7_9STRA6.050e-4053.68Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2R2B9_9STRA1.060e-3954.81Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A812XQS1_9DINO2.360e-3959.35MAD2L1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
M4C3C3_HYAAE3.650e-3957.72HORMA domain-containing protein n=5 Tax=Peronospor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1931contigH-paniculata_contig1931:1077..3222 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.0
Seed ortholog evalue8.7e-44
Seed eggNOG ortholog2880.D8LIH5
Preferred nameMAD2L1
KEGG koko:K02537
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04914,ko05166,map04110,map04111,map04113,map04114,map04914,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000819,GO:0000922,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005816,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007346,GO:0008150,GO:0008152,GO:0008356,GO:0009056,GO:0009057,GO:0009405,GO:0009628,GO:0009790,GO:0009792,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010369,GO:0010498,GO:0010564,GO:0010605,GO:0010639,GO:0010941,GO:0010948,GO:0010965,GO:0010997,GO:0012505,GO:0015630,GO:0016043,GO:0017145,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023052,GO:0030071,GO:0030154,GO:0030163,GO:0030587,GO:0031145,GO:0031156,GO:0031323,GO:0031324,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031570,GO:0031577,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0032954,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033313,GO:0033316,GO:0033554,GO:0033597,GO:0034059,GO:0034399,GO:0034599,GO:0035556,GO:0035690,GO:0036293,GO:0040007,GO:0040020,GO:0042078,GO:0042176,GO:0042177,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043900,GO:0044087,GO:0044092,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044732,GO:0044774,GO:0044779,GO:0044877,GO:0045120,GO:0045595,GO:0045786,GO:0045787,GO:0045835,GO:0045839,GO:0045841,GO:0045930,GO:0045931,GO:0046983,GO:0048133,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051233,GO:0051246,GO:0051248,GO:0051276,GO:0051301,GO:0051302,GO:0051312,GO:0051321,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051445,GO:0051447,GO:0051493,GO:0051494,GO:0051603,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060236,GO:0060255,GO:0060548,GO:0060631,GO:0065007,GO:0065009,GO:0070013,GO:0070482,GO:0070507,GO:0070887,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0072395,GO:0072413,GO:0072416,GO:0072477,GO:0072480,GO:0072486,GO:0072686,GO:0080090,GO:0090068,GO:0090169,GO:0090224,GO:0090231,GO:0090232,GO:0090266,GO:0090267,GO:0090702,GO:0098687,GO:0098722,GO:0098728,GO:0098813,GO:0099080,GO:0099081,GO:0099120,GO:0099134,GO:0099135,GO:0099136,GO:0099139,GO:0099512,GO:0099513,GO:0110020,GO:0110029,GO:0140014,GO:1901261,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1901976,GO:1901978,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1901993,GO:1901994,GO:1902099,GO:1902100,GO:1902102,GO:1902103,GO:1902115,GO:1902412,GO:1902413,GO:1903046,GO:1903047,GO:1903320,GO:1903321,GO:1903436,GO:1903437,GO:1903499,GO:1903500,GO:1903504,GO:1904666,GO:1904667,GO:1905132,GO:1905133,GO:1905318,GO:1905818,GO:1905819,GO:1990047,GO:1990492,GO:1990498,GO:2000241,GO:2000242,GO:2000431,GO:2000432,GO:2000816,GO:2001251
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG3285@1,KOG3285@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons3
Model size371
Cds size369
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1931.4879.1prot_H-paniculata_contig1931.4879.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1931 1077..3222 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929472.7701685-CDS-H-paniculata_contig1931:1076..12011622929472.7701685-CDS-H-paniculata_contig1931:1076..1201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 1077..1201 +
1691480876.5845146-CDS-H-paniculata_contig1931:1076..12011691480876.5845146-CDS-H-paniculata_contig1931:1076..1201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 1077..1201 +
1622929472.7864528-CDS-H-paniculata_contig1931:2366..25201622929472.7864528-CDS-H-paniculata_contig1931:2366..2520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 2367..2520 +
1691480876.5990791-CDS-H-paniculata_contig1931:2366..25201691480876.5990791-CDS-H-paniculata_contig1931:2366..2520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 2367..2520 +
1622929472.8030703-CDS-H-paniculata_contig1931:3132..32221622929472.8030703-CDS-H-paniculata_contig1931:3132..3222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 3133..3222 +
1691480876.6079206-CDS-H-paniculata_contig1931:3132..32221691480876.6079206-CDS-H-paniculata_contig1931:3132..3222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1931 3133..3222 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1931.4879.1

>prot_H-paniculata_contig1931.4879.1 ID=prot_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
WLLESELQRLVLVIVGTDSGETLERWTFNVHREERPVLTDGSNNPSTEAP
RKSMKKIQGEIRDIIRQITASVTFLPVLSEPCAFDLLVYANTDAKVPTEW
EESDPKHIKDSSEVRLRSFTTKV
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mRNA from alignment at H-paniculata_contig1931:1077..3222+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1931.4879.1 ID=mRNA_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2146bp|location=Sequence derived from alignment at H-paniculata_contig1931:1077..3222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTTGTTGGAGAGCGAGCTCCAACGGCTGGTGCTCGTTATCGTCGGTAC TGACTCGGGCGAGACACTTGAACGATGGACTTTCAACGTTCACAGGGAAG AGAGACCTGTCCTCACGGATGGAAGGTGCGCTGTGTTGGTTGTGGCTGTA CGAGTGACAACGACGTGAATTGTTTTGTTTTGTATGATTACAGGAAAATG AAGTGGAGTTTAACGTGAGTGATGAGGGTGTTGGCGAAACAAGTATCCAA TTGATAATTTCAACTTGGTTCTGCATGAGTCATATTGATGGTGCGGTAGA TGATGGACCTCAGGGCACCTCCACCAACGTCTCGTTACAAGACGAGCTTC TTTTCGAAATTCGTGAAGCTCGTAGAACTTGCGAGTTTTGGGAAATTCAT CCTTCTGTACTGGAAAGATGGCGCAGGTAGGCCAGAGTTTAGGAACTAAA GCTCACTATAGTTGAAACTAGCAAAAAGGTAGTTGGAAAATGATCAATGA CGCCCAACCCACAAACGGGTTTTTCAGCTCGTGCTGTTTTTTTTTGGGGG TGTTATTCAATATGGTCTTGAGGGTGTCAATTTCACACACCCTCCCCCAG TGCGATAGACTTTTCTAATTGCATAGAACGTTTCTGCAGTTGATTAATGA GCACATTTTAGTGTTTTTTCACGGTGGAAATCTGTGGTTGGGTCAAACAC AGGAGTTTTTTTGTCATTTTTATTATTTTTTTATCGAACGGAAAAGAAGA GCAAAGAACCAACTACTGCCCCTGTCTGGATTTTTCCGATTCCTTTGACA TAATGCCTTGAGTTTTGTCATAGGAAGGTGCTGAAAAGAAACGAGAGAAA CACTAACGTTGAGGATGACCCTTGCGGGTTGAAACCCTAGATGGTTCTCC GATCAATTTCTCGTGAAAGACTGAAAAAATGATTTTGCGTTATGCAAGTT CCAATCCTCTATTTTATAACTGGCAAAGTGCAAGTACAACGGCTATCCCA CAATATGCCCTAGGTTTATAAGTGATGAACCGAAAGAGGACCGATACGAC AGTATTCCCCGCGTTTTGCGGGGTTCGGAAATCGGGGCTCGGTAATTTTA TCGTGTCGTGGGCTTGAGCTCCTTCCCTCACAACGCTTCCGAGTCGTAAA GGTGATTCTTAACGCTCTGGCGTGGAACGGAAAAGGCAAAGTGCAAGTTT TTCGTTGTATGACACCTTGGTTATCAGGTACCAACTAACTGAACGGATGT CGTCGTTACTTACCGCCCACCTTTGTTTTGCCCAAAGCAGCAACAACCCC AGCACTGAAGCGCCGCGTAAGTCGATGAAGAAGATCCAGGGCGAGATTCG CGACATCATCCGACAGATCACGGCTAGCGTGACATTCTTGCCTGTCCTGA GCGAGCCGTGCGCGTTCGATTTGTTGGTGTATGCCAATACTGATGTGAGC TCCATTTATTTGGGTTGTTACTATTGCTGGTACTGGTGCTCGTGATTTTT ACTGGTATTTGTCCCACATATAACAGTTGTATCAATAGTAGTGACGGTAG TCGTGTATGGTCCGTGGCTACATCCCTGCTGTGTGTGTGTTGGTGGGTTG TGGTTGGCCTACGCAGAACCGGTCCGCTGTTCGTGCACTAGCCAAGAATT GAAATGCAAGTATAGATGTCCCTCAAATGATGGAGTACTTGGTAGATGCT TGCGTAGTTGTAGATGTGTTGGAACAATTGTCTTTAATATGGTCATTTAT TCGTTGAAAGTTATTCACGTACAGAGTTGGAGAGGTGTTGCGGAATGGCG GTGTGCACGGGAACGGGGAGGGTTTCCATAGGATGATACGGTACTGTAAC TATAGTCTATAACATACCCTCCTTCCCGTGACAATGGGTGGGGTGTAAAG ACAGACTTCATCTTGTAGCGAGTGCTAGTGCTAATGCTAGTGCCAGTGAA ATGGAGTTGTGGTTAGGCATTTTTTTTTTTTTTTTCTATCTTTGAGGTTT GTTTCCAACCCAGCTATGCCGTTTGTAATGTTGCTTGTGTGGTAATCCGT ATTCAGGCTAAAGTTCCGACAGAATGGGAAGAGTCGGATCCCAAGCACAT CAAGGATTCGTCAGAAGTTCGCCTGCGGTCGTTCACCACTAAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig1931:1077..3222+

>mRNA_H-paniculata_contig1931.4879.1 ID=mRNA_H-paniculata_contig1931.4879.1|Name=mRNA_H-paniculata_contig1931.4879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig1931:1077..3222+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTTGTTGGAGAGCGAGCTCCAACGGCTGGTGCTCGTTATCGTCGGTAC
TGACTCGGGCGAGACACTTGAACGATGGACTTTCAACGTTCACAGGGAAG
AGAGACCTGTCCTCACGGATGGAAGTGGTTGTTGGAGAGCGAGCTCCAAC
GGCTGGTGCTCGTTATCGTCGGTACTGACTCGGGCGAGACACTTGAACGA
TGGACTTTCAACGTTCACAGGGAAGAGAGACCTGTCCTCACGGATGGAAG
CAACAACCCCAGCACTGAAGCGCCGCGTAAGTCGATGAAGAAGATCCAGG
GCGAGATTCGCGACATCATCCGACAGATCACGGCTAGCGTGACATTCTTG
CCTGTCCTGAGCGAGCCGTGCGCGTTCGATTTGTTGGTGTATGCCAATAC
TGATCAACAACCCCAGCACTGAAGCGCCGCGTAAGTCGATGAAGAAGATC
CAGGGCGAGATTCGCGACATCATCCGACAGATCACGGCTAGCGTGACATT
CTTGCCTGTCCTGAGCGAGCCGTGCGCGTTCGATTTGTTGGTGTATGCCA
ATACTGATGCTAAAGTTCCGACAGAATGGGAAGAGTCGGATCCCAAGCAC
ATCAAGGATTCGTCAGAAGTTCGCCTGCGGTCGTTCACCACTAAGGTGGC
TAAAGTTCCGACAGAATGGGAAGAGTCGGATCCCAAGCACATCAAGGATT
CGTCAGAAGTTCGCCTGCGGTCGTTCACCACTAAGGTG
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