prot_H-paniculata_contig19205.4838.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19205.4838.1
Unique Nameprot_H-paniculata_contig19205.4838.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length41
Homology
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: D7FHI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI1_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 4.050e-18
Identity = 35/40 (87.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    2 VRIHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +R++QFDKLGGGGGFGLFHPNGNEV+VDEGVWDLRTHRL+
Sbjct:  208 LRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLL 247          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.170e-18
Identity = 35/40 (87.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    2 VRIHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +R++QFDKLGGGGGFGLFHPNGNEV+VDEGVWDLRTHRL+
Sbjct: 2105 LRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLL 2144          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: F0VZP7_9STRA (Uncharacterized protein AlNc14C3G376 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZP7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.290e-8
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 KVRIHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            K  +H+FDKL   G  G FHPNGNEV+++  VWDLRT+RL+
Sbjct: 1531 KTAVHKFDKLSNAGN-GFFHPNGNEVVINAAVWDLRTYRLL 1570          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A024G1Q1_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1Q1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.770e-8
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 KVRIHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            K  +H+FDKL   G  G FHPNGNEV+++  VWDLRT+RL+
Sbjct: 1538 KTALHKFDKLSNAGN-GFFHPNGNEVVINAAVWDLRTYRLL 1577          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A662Y0Y0_9STRA (LisH domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0Y0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.580e-7
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G +G FHPNGNEV+V+  VWDLRT+RL+
Sbjct: 1423 LYKFDKLSNVG-YGFFHPNGNEVIVNSAVWDLRTYRLL 1459          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A3R7MTZ6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MTZ6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.160e-7
Identity = 22/38 (57.89%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G +G FHPNGNEV+++  VWDLRT+RL+
Sbjct:  175 LYKFDKLSNVG-YGFFHPNGNEVIINSAVWDLRTYRLL 211          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A6G0LG48_9STRA (LisH domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LG48_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.570e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G  G FHPNGNEV+V+  VWDLRT+RL+
Sbjct: 1427 LYKFDKLSNVG-CGFFHPNGNEVIVNSAVWDLRTYRLL 1463          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A3M6VCW5_9STRA (LisH domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW5_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.580e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G  G FHPNGNEV+V+  VWDLRT+RL+
Sbjct: 1412 LYKFDKLSNVG-CGFFHPNGNEVIVNSAVWDLRTYRLL 1448          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: G5A448_PHYSP (LisH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A448_PHYSP)

HSP 1 Score: 52.8 bits (125), Expect = 7.580e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G  G FHPNGNEV+V+  VWDLRT+RL+
Sbjct: 1425 LYKFDKLSNVG-CGFFHPNGNEVIVNSAVWDLRTYRLL 1461          
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Match: A0A225WHN8_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHN8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.580e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 IHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV 41
            +++FDKL   G  G FHPNGNEV+V+  VWDLRT+RL+
Sbjct: 1407 LYKFDKLSNFG-CGFFHPNGNEVIVNSAVWDLRTYRLL 1443          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19205.4838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FHI1_ECTSI4.050e-1887.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDL7_9PHAE4.170e-1887.50LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
F0VZP7_9STRA1.290e-858.54Uncharacterized protein AlNc14C3G376 n=1 Tax=Albug... [more]
A0A024G1Q1_9STRA1.770e-858.54LisH domain-containing protein n=1 Tax=Albugo cand... [more]
A0A662Y0Y0_9STRA1.580e-760.53LisH domain-containing protein n=2 Tax=Nothophytop... [more]
A0A3R7MTZ6_9STRA2.160e-757.89Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6G0LG48_9STRA7.570e-760.53LisH domain-containing protein n=4 Tax=Phytophthor... [more]
A0A3M6VCW5_9STRA7.580e-760.53LisH domain-containing protein n=2 Tax=Peronospora... [more]
G5A448_PHYSP7.580e-760.53LisH domain-containing protein n=1 Tax=Phytophthor... [more]
A0A225WHN8_9STRA7.580e-760.53LisH domain-containing protein n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..41
e-value: 1.0E-10
score: 43.0
IPR033270VPRBP/DCAF1 familyPANTHERPTHR13129VPRBP PROTEIN-RELATEDcoord: 3..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19205contigH-paniculata_contig19205:630..752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19205.4838.1mRNA_H-paniculata_contig19205.4838.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19205 630..752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19205.4838.1 ID=prot_H-paniculata_contig19205.4838.1|Name=mRNA_H-paniculata_contig19205.4838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
KVRIHQFDKLGGGGGFGLFHPNGNEVLVDEGVWDLRTHRLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR033270VPRBP/DCAF1