prot_H-paniculata_contig19165.4812.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19165.4812.1
Unique Nameprot_H-paniculata_contig19165.4812.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length139
Homology
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A4S4K9S3_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K9S3_9APHY)

HSP 1 Score: 104 bits (260), Expect = 2.150e-23
Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 0
Query:    1 MQAHFRYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQ------LEAEFRMQEDHN------------------------ILEDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALS 136
            M+  +RYL    D  I++  + +  DL G+VDADWA DV  R+S TGY+F L GGAISW S KQ        EAE+    D +                        +++++SAI L   +  H RTKHI + +H IR+    G + ++Y  TGDQ+AD +TKAL+
Sbjct: 1265 MKCVYRYLRGTSDYRIVYSSERHS-DLIGYVDADWAADVSSRRSITGYVFLLAGGAISWSSKKQSSTALSTTEAEYMAASDASKEAIWLRGLLHEFVCLNSSYSVPLMIDNQSAIALVKNAEFHSRTKHIAIRYHFIRKIHDRGDILVEYCPTGDQVADIMTKALA 1429          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: UPI001E1BA19B (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA19B)

HSP 1 Score: 99.8 bits (247), Expect = 3.940e-23
Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    7 YLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQ--------------------------LEAEFRMQEDHNI---LEDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALS 136
            YL+   + G+ F G S+   L GF DAD+A DV  R+STTGY+F LHGG ++WC  +Q+                          L  E  +QE + I    +++SA+ L     +H RTKHI + +H IR+    G + + YV T +QLAD LTK L+
Sbjct:   63 YLSGTRNYGLCFSGSSSS-TLTGFTDADYAGDVETRRSTTGYVFLLHGGPVAWCCKRQKCTSLSTTESEYIAACESTREAVWLKRLLIELGLQETNPIPLLCDNQSAVRLVRNPDSHQRTKHIDIKYHYIRDQQEGGEINISYVDTNNQLADILTKPLA 220          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A2N9GSE9_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GSE9_FAGSY)

HSP 1 Score: 101 bits (251), Expect = 3.520e-22
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGH-DLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFRMQEDHNILE------------------------DESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALST 137
            RYL S P  G+MF    +GH ++EG+ DADWA  +  RKST+GY   + G  ++WCS KQ +      EAE+R    H + E                        +++AI+++     H RTKH+ V+ H I+E L +GI+++ +V++ DQLAD LTKA+S+
Sbjct: 1231 RYLKSAPGKGLMFS--KHGHLEVEGYTDADWAGSITDRKSTSGYFTFVGGNLVTWCSKKQNVVARSSAEAEYRAM-SHGVCELLWLRILMGELGFNLEKPVNLYCDNKAAISIAHNPVQHDRTKHVEVDRHFIKEKLTDGIISVPFVKSEDQLADILTKAVSS 1390          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: UPI001929C8C1 (secreted RxLR effector protein 161-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929C8C1)

HSP 1 Score: 97.1 bits (240), Expect = 3.720e-22
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFR---------------MQEDHNILE-------DESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALST 137
            RYL    D GI++  K  G  + G+ DAD+A D   R+STTGYIF L  G +SWCS +Q        EAE+R               M++ H  +E       + SA+ L+     H RTKHI V++H +RE + +G + +K + T  Q+AD  TK LST
Sbjct:   46 RYLKGTTDYGILYH-KGEGCQVTGYCDADYAGDCNTRRSTTGYIFSLGSGVVSWCSKRQPTVSLSTTEAEYRAVAMAAQESTWLMQLMRDLHQPIEQATIHCDNRSAVCLAENPMFHARTKHIEVHYHFLREKVLQGKIHMKLMTTKKQVADIFTKGLST 204          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: UPI001CC51485 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC51485)

HSP 1 Score: 97.8 bits (242), Expect = 4.050e-22
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFRMQEDHNILEDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALS 136
            RY+ +    GIM+  +  G  L G+ DAD+A D   R+STTGY+F L  GAISWCS +Q        EAE+R      +   ES I L+     H RTKH+ V++H IRE + +  + LK+V+T +Q AD  TK LS
Sbjct:  113 RYVKNTLGYGIMYK-RGGGCKLVGYCDADYAGDYDTRRSTTGYVFMLGSGAISWCSKRQPTMSLSTTEAEYRAAA---MAAQESTICLAENPVFHARTKHVEVHYHFIREKVLQEEIELKHVRTENQAADLFTKGLS 245          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A151RDW4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RDW4_CAJCA)

HSP 1 Score: 100 bits (248), Expect = 5.380e-22
Identity = 67/160 (41.88%), Postives = 86/160 (53.75%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGH-DLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEF----------------------RMQEDHNIL-EDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKAL 135
            RYL    DLGI +  K  G  DL  + D+D+A D   RKST+GY+F L  GAISW S KQ +      EAEF                      +++E  +IL ++ SAI LS     H R+KHI V +H +R   +EGI+ LKY  T +QLAD LTKAL
Sbjct:  286 RYLRGTTDLGIHY--KRQGKTDLTSYCDSDYAGDQDDRKSTSGYVFLLSSGAISWSSRKQPIVTLSTTEAEFVAAAYCVCQGIWIKRILEELGVKLEESLSILCDNSSAIKLSKNPVMHGRSKHIDVRFHFLRNLCKEGIIELKYCTTEEQLADVLTKAL 443          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 96.7 bits (239), Expect = 8.150e-22
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEF-----------------------RMQEDHNILEDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKAL 135
            RYL    DLGI +    +   + GF D+D+A DV  RKSTTGY+F +  GAI+WCS +QQ       EAE+                        ++     ++++SAI L      H RTKHI V +H I+E  + G + ++YV++ DQLAD LTK L
Sbjct:   82 RYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPL 238          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A251TA88_HELAN (Putative ribonuclease H-like domain-containing protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TA88_HELAN)

HSP 1 Score: 99.8 bits (247), Expect = 1.190e-21
Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGH-DLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFR-----------------------MQEDHNILEDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALS 136
            RYL      GI+F  KSNGH +++ + DADWA D G R+ST+GY   + G  ++W S KQ++      EAEFR                             + ++++AI +S     H RTKH+ V+ H I+E L EGI+ L YVQ+ DQLAD LTKA++
Sbjct:  936 RYLKGTAGHGILF--KSNGHLEIQAYTDADWAGDKGTRRSTSGYFTMVGGNLVTWRSKKQKVVALSSAEAEFRGVARGLAEILWIRKLLTEIGFLPTTATKIMCDNKAAIQISENPVQHDRTKHVEVDRHFIKEKLEEGIIELPYVQSKDQLADILTKAVN 1094          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 99.8 bits (247), Expect = 1.200e-21
Identity = 63/159 (39.62%), Postives = 84/159 (52.83%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFRMQED--------HNILED---------------ESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKAL 135
            RY+    DLGI +  +    +L GFVD+D+A DV  RKST+GY+F L GGAI+W S KQ +      EAEF              N+LE+                S I LS     H R+KHI V +H +RE ++EG + L Y  T DQ+AD +TKA+
Sbjct: 1158 RYVQGTLDLGIQYE-RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAV 1315          
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A0L9VUJ5_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VUJ5_PHAAN)

HSP 1 Score: 95.5 bits (236), Expect = 1.280e-21
Identity = 56/160 (35.00%), Postives = 85/160 (53.12%), Query Frame = 0
Query:    6 RYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQL------EAEFRMQED--------HNILED--------------ESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALST 137
            RY+    D+ + FGG      + G+VD+D+A D+  RKSTTGY+FKL GG +SW S  Q +      EAE+               +LE+              +SA++++     H RTKHIGV +H +RE + +G + L+ + T D LAD +TK ++T
Sbjct:   53 RYIKGTSDVALCFGGSK--FIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQNKITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEKGDVDLEKICTKDNLADVMTKPVNT 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4K9S3_9APHY2.150e-2337.35Integrase catalytic domain-containing protein n=1 ... [more]
UPI001E1BA19B3.940e-2336.48secreted RxLR effector protein 161-like n=2 Tax=Da... [more]
A0A2N9GSE9_FAGSY3.520e-2236.81Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
UPI001929C8C13.720e-2237.50secreted RxLR effector protein 161-like n=1 Tax=Di... [more]
UPI001CC514854.050e-2242.34uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A151RDW4_CAJCA5.380e-2241.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1N3K4_PHOPY8.150e-2237.11Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A251TA88_HELAN1.190e-2138.51Putative ribonuclease H-like domain-containing pro... [more]
Q9C7Y1_ARATH1.200e-2139.62Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
A0A0L9VUJ5_PHAAN1.280e-2135.00Uncharacterized protein n=1 Tax=Phaseolus angulari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..70
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19165contigH-paniculata_contig19165:3314..3795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19165.4812.1mRNA_H-paniculata_contig19165.4812.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19165 1018..3795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19165.4812.1 ID=prot_H-paniculata_contig19165.4812.1|Name=mRNA_H-paniculata_contig19165.4812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
MQAHFRYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIF
KLHGGAISWCSSKQQLEAEFRMQEDHNILEDESAINLSMGSGAHCRTKHI
GVNWHGIREWLREGILALKYVQTGDQLADSLTKALSTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like