mRNA_H-paniculata_contig19106.4792.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 171 bits (433), Expect = 2.450e-44 Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 2
Query: 356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
Q+L R + A + S +T + FH FC+ F ELY + LP G DL++VM YD +GF G +GS D+T ++WG P + AR+YTGKE PT+A+++ VDHSGRVL+VT+G G+ DK I+R DKA++++R D Y ++ L DG K ++++D GYHKWR LI P K P ++++ RL+S RKDV
Sbjct: 89 QILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY---------------DKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 289
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 169 bits (428), Expect = 8.850e-44 Identity = 89/201 (44.28%), Postives = 117/201 (58.21%), Query Frame = 2
Query: 389 MSAKTA*TFFHAFCEKFVHELYGT*IKLPD--GGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
MSAKT T FH FC+ F E+Y I LP G+L VM YD LGF+G MGS D+T + W P + AR YTGKE +PT+ Y++ V+H+GR ++VT+G S DK V D + K+R D Y F + N DGT TT K ++++D GYHKW+IL+ P K P S IL++ RL+SVRKDV
Sbjct: 121 MSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTV---------------CWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDV 306
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.520e-43 Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 2
Query: 356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
Q+L R + A + S +T + FH FC+ F ELY + LP G DL++VM YD +GF G +GS D+T ++WG P + AR+YTGKE PT+A+++ VDHSGRVL+VT+G G+ DK I+R DKA++++R D Y ++ L DG K ++++D GYHKWR LI P K P ++++ RL+S RKDV
Sbjct: 180 QILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY---------------DKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDV 380
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.280e-42 Identity = 89/201 (44.28%), Postives = 118/201 (58.71%), Query Frame = 2
Query: 389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
MS T FH FCE F E+Y I LP + G+L RVM Y+ LGF G MGS D+T + W P + R YTGKE PT+ Y++ V+H+GRVL+VT+G GS DK I+ D+A+ ++R D+ Y FT+ DGT T K ++I+D GYHKWR+LI P K P S +L++ RL+SVRKDV
Sbjct: 150 MSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTII---------------CCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDV 335
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 164 bits (415), Expect = 3.890e-41 Identity = 92/216 (42.59%), Postives = 122/216 (56.48%), Query Frame = 2
Query: 356 QLLRRRDAAAGM------SAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
Q+L R + A + S +TA FH F F E+Y I LP G K+VM YD LGF+G GS D+T + WG P + AR YTGKE PT+AY++ VDH+ RVL+VT G GS DK+I+R D A++K+R+D Y EFT+ ADGT K ++++D GYHKW LI P K P + ++ RL+SVRKDV
Sbjct: 164 QILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRY---------------DTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDV 364
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.610e-39 Identity = 94/257 (36.58%), Postives = 130/257 (50.58%), Query Frame = 2
Query: 389 MSAKTA*TFFHAFCEKFVHELYGT*IKLPD--GGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDVGVSMAF*NADSRF*-TRHPISEKRADRQCHVDVLHSTQHATQVRQHGGDGRELGMG 1150
MSA T FH FC+ F E+Y I LP G+L VM YD LGF+G MGS D+T + W P + R YTGKE +PT+ Y++ V+H+GR +VT+G GS DK IV D A+ K+R D+ Y F + N DGT TT K ++++D GYHKW+IL+ + P E + G+ + + RH + A RQ + VLH QHA +R++G G + MG
Sbjct: 148 MSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIV---------------CWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHAAHLRRNGRAGGKHAMG 389
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.520e-38 Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 2
Query: 389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYV----------------------------STEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
MSAKT FH FC F E+Y I LP + G L VM YD LGF G +GS D+T + W P + AR YTGKE PT+AY++ VDH+GR ++VT+G GS DK IV D A+ K+ D+ Y F + N DGT TT K ++++D GYHKW+ILI P K P S +L++ RL+SVRKDV
Sbjct: 108 MSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIV---------------CWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 321
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 149 bits (377), Expect = 1.500e-37 Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 2
Query: 449 LYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
+Y I LP + G L V+ YD LGF G MGS D+T + W P + AR YTGKE PT+ Y++ VDH+GR ++VT+G GS DK V D A+ K+R D+ Y F + N DGT TT K ++++D GYHKW+ILI P K P S +L++ RL+SVRKDV
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTV---------------CWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDV 166
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.270e-34 Identity = 84/201 (41.79%), Postives = 106/201 (52.74%), Query Frame = 2
Query: 389 MSAKTA*TFFHAFCEKFVHELYGT*IKLP--DGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
MSAKT FH FC F E+Y I LP + G L VM YD LG P + AR YTGK+ PT+AY++ VDH+ R ++VT+G GS DK IV D A+ K+R D+ Y F L N DGT TT K + + D GYHKW+ILI P K P S + +L++ RL+SVRKDV
Sbjct: 43 MSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIV---------------CWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDV 211
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 135 bits (339), Expect = 4.840e-31 Identity = 78/223 (34.98%), Postives = 114/223 (51.12%), Query Frame = 2
Query: 335 LASVGERQLLRRRDAAAG------MSAKTA*TFFHAFCEKFVHELYGT*IKLPDGGDLKRVMAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDHSGRVLSVTKGCEGSQIDKAIVRLXXXXXXXXXXXXXXLDKAISKVRKDEPYVSTEFTLINADGTMTTHKDVFIIIDEGYHKWRILIYPMKSPGSAEAILWTHRLDSVRKDV 985
L +G Q+L R + A MS +TA FH FC+ F L+ + LP+G LK+V Y +G G + S D T + W P S + GKE TL YE DHSGR+LS TKG G++ DK +V+ D ++ ++R++EP+ S +F L + +G T H ++I+D GYH+ LI P K S W+ R +S+RKD+
Sbjct: 111 LKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKR---------------DLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDI 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19106.4792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19106.4792.1 >prot_H-paniculata_contig19106.4792.1 ID=prot_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp MAVYDGLGFAGGMGSADITSVHWGCAPVSHARLYTGKEKIPTLAYEMIVDback to top mRNA from alignment at H-paniculata_contig19106:1103..3864- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19106.4792.1 ID=mRNA_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2762bp|location=Sequence derived from alignment at H-paniculata_contig19106:1103..3864- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19106:1103..3864- >mRNA_H-paniculata_contig19106.4792.1 ID=mRNA_H-paniculata_contig19106.4792.1|Name=mRNA_H-paniculata_contig19106.4792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig19106:1103..3864- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |