mRNA_H-paniculata_contig1891.4723.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1891.4723.1
Unique NamemRNA_H-paniculata_contig1891.4723.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: D8LEG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG7_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.180e-72
Identity = 341/1107 (30.80%), Postives = 435/1107 (39.30%), Query Frame = 1
Query:  880 SERQKANSQRSLGELTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDERDRVRRAKQLTRAREDILRWKEESAKAEREKNETAGRRHRLELATL----LQRRFRSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARR----------------------YRQAQQQKDRA----MASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLSSL------------KITSAPSTRDDGDQRSSEQSISDPSEKQLSVRDLNDSISQDKEDTTAAPWEKWAERSPLVKAEGLDM-----THYLNERDVRPRTAAAAVESKPLPIQMPISSATRHPAGMMTVKVKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDSRVMHGESIPALGEITGATTAGRCQTPVVPASTTQESF-----LHFD------ETPAVQGIADVLPMVFPLTGTA-PEHAETLNPVGVPGTLNPGGVASDKSMTHNNHPDAQPILPVPPV--ATMARRNPLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFMEDSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQ-GEDGRWRRRXXXXXXXAATRRRNFFLNMPSH------------APNVPDSGGRGHAAVNGDDCEERRENQRGVGAHHIDTGERM------LKFRYACCASQIQHTYQNFRHRQYLRDWALALVSERTLSAGFVYPTRLSFFAI*GNGKLRVLGVTKSQQTKFPNLL*Q*VNN*TSSYPYLAQMICVRKNVLQ*TYSQRTTRTRSFDHKMTT*AT*TPLPNAIH*VPHMGSVLVSCG*TSLGRAATVSLQPTPPVRFLEQLRRWLLCRVTARRFSLLRLRQGRAAVCLQSAERARSARARVRTLLDARVRLWLERSYALH-RRERPIRPSPVGEQLW--RERSDHPATRNPGGFWSTSEDFAAASAAAPAACAS-EANLSGDTRPRNDRAKSRALAEALAPTMGAPPPGCPDPLDVDWGTWGRELELEFPRTP 3948
            ++  +ANSQRSL ++TRDWRNDP STPARRRRLINDVCKVIVR+Y HASV+RVV  R++   AT++QA  RM  AR  + AK+ ARR  AAL LQL WLS  AR R+ VLR+ RD  RR +                                          LQRRFR+ QE       + + +A   L  A R+R E  R      +                          ++ +D+A    +AS+RL Q AWR+ KA  +L+   R  L       S+               TS  S     D +  + +IS  S +Q    D+N+          A+ W+ W+    +  +   ++     T      +VRP T+  A ES   P                 V V+ G EETSLVTPIV+TE      S  E  +    R++  G A     D  V+   S   LG      T  R  T    A    E+       H D      E P    ++        +T  A P   +  +   V G ++     +   + +        ++PV PV   T A        T       P E +  DV    V  +   FMED+QVYLGC  CGVK+LVEAVD  + +S QGQPTPEVLYLCTTCG TLR  GE+GRW+RR       AA RRR    ++                P    +G R  A V      E  +      A H   G R        + RYA CA  IQH YQNFRHRQYLRDWA +LV  R                               ++ K                       C+R                                                                              CR              RA V LQSA RA SAR R  TL  AR+RLW +R  A++        PSPV  +L    ER   P  R PG     S   A+  AA   A     AN++        R++ RALAEALAP M  PPPGCP  LDVDWG WG  L L FP +P
Sbjct:   16 AQHHRANSQRSLQDMTRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMSWARRLFCAKLEARRVNAALVLQLGWLSCAARRRVRVLREARDHDRRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRFRARQE-----LLVALTQARRRLTQAQRLRDEQHREATAMMQATXXXXXXXXXXXXXXXXXXXXXXXQRRARDKAAVERLASARL-QQAWRRYKAANELNRRRRRELETSGLRSSTTDEDATEHRTEGASSTSLCSNEGHPDPKDEDPNISKKSVRQEMSGDVNEG---------ASGWDNWSSAFGVNSSLAAEIAREGETDNAAAENVRPWTSTGAAESPAPPRSRXXXXXXXXXXXXXXVTVRRGSEETSLVTPIVLTE------SGGEEMDAETTRKSEVGTALAT-ADVTVVTAFSS-TLGSDESGGTRPRAATVADKAVRVAEAKGAAPPAHADAPKARREQPERTKLSASATAASEITKPANPAPNQDADDAAVAGKISQILSTTAPQIANEEATAVPAMVPVAPVMKGTAASEGDPPMMTVSTPMTEPAEEAARDV---VVKPTEQLFMEDTQVYLGCGMCGVKYLVEAVDPGVSKSTQGQPTPEVLYLCTTCGATLRNNGENGRWKRRRRPSSAPAAGRRRGSAFSVGGRDGGARANNEYGPPPGNGWNGDRAAALVESPSVVESLQQ-----ALHTGGGRRQGENDSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLVQSR-------------------------------RRAKH----------------------CLR------------------------------------------------------------------------------CR--------------RATVMLQSAARAMSARRRCSTLRAARLRLWTDRVAAVYVNGGDEYSPSPVAAELLCELERLTTPLPRPPG----LSPTLASQPAAVVKARGGLRANVACG------RSRGRALAEALAPRMERPPPGCPAALDVDWGEWGVGLRLAFPSSP 936          
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: A0A6H5JBQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ7_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.330e-67
Identity = 331/1082 (30.59%), Postives = 440/1082 (40.67%), Query Frame = 1
Query:  922 LTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDERDRVRRAKQLTRARED----ILRWKEESAKAEREKNETAGRRHRLELATLLQRRFRSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARRYRQAQQQKDRAMASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLS---SLKITSAPSTRDDGD------QRSSEQSIS------DPSEKQ--LSVRDLNDSISQDKEDTTAAPWEKWAERSPLVKAEGLDMTHYLNERD-----VRPRTAAAAVESKPLPIQMPISSATRH-------PAGMMTVKVKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDSRVM----HGESIP---ALGEITGATTAGRCQTPVVPASTTQESFLHFDETPAVQGIADVLPMVFPLTGTAPEHAETLNPVG----VPGTLNPGGVASDKSMTHNNHPDAQPILPVPPVATMARRN-------PLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFMEDSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQ-GEDGRWRRRXXXXXXX----------------AATRRRNFFLNMPSHAPNVPDSGGRGHAAVNGDDCEERREN--QRGVGAHHIDTGERMLKFRYACCASQIQHTYQNFRHRQYLRDWALALVSERTLSAGFVYPTRLSFFAI*GNGKLRVLGVTKSQQTKFPNLL*Q*VNN*TSSYPYLAQMICVRKNVLQ*TYSQRTTRTRSFDHKMTT*AT*TPLPNAIH*VPHMGSVLVSCG*TSLGRAATVSLQPTPPVRFLEQLRRWLLCRVTARRFSLLRLRQGRAAVCLQSAERARSARARVRTLLDARVRLWLERSYALHRRERP-IRPSPVGEQLW--RERSDHPATRNPGGFWSTSEDFAAASAAAPAACASEANLSGDTRPRNDRAKSRALAEALAPTMGAPPPGCPDPLDVDWGTWGRELELEFPRTP 3948
            ++RDWRNDP STPARRRRLINDVCKVIVR+Y HASV+RVV  R++   AT++QA  RM + R  + AK+ AR   AA  LQL WLS  A+ R+ VLR+ RD  RR ++  R R +                            LE A +LQRRFR+                                                                                          L+ +  PS+  D D      + +S +S+       DP ++   +S + +   +S D  +  A+ W+ W+    +  +   ++     E D     VRP T+  A ES       P  S +RH       PAGMMTV V+ G EETSLVTPIV+TE+   ++    + E      ++         DS ++     G + P   A+ + T      +   P   A T +      + T           +  P      + A+     G    +P T  P  +A++         +A+ +  + PVA + +         P+  +T + E   P E +  DV    V  +   FMED+QVYLGC  CGVK+LVEAVD  + +S QGQPTPEVLYLCTTCG TLR  GEDGRW+R XXXXXXX                   R  N +   P +  N    G R  A V      E  +   Q G G    +  +   + RYA CA  IQH YQNFRHRQYLRDWA +L S+  L   F  P             L +LG                                                                                  G T L  +          + F  QLRRWL+ ++ + R +   LR  RA V LQSA RA SAR R  TL  AR+RLW +R  A++        PSPV  +L    ER   P  R PG     S   A+     PA   +   L  +      R++ RALAEALAP+M  PPPGCP  LDVDWG WG  L LEFP +P
Sbjct:    1 MSRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMISTRRLFCAKLEAR-VSAASVLQLGWLSWAAQRRVRVLRETRDHDRRVEEGRRKRREDXXXXXXXXXXXXXXXXXXXXXXXXXXXLESAVVLQRRFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRELETSGLPSSTTDEDAMEHRTEGASSRSLCSNEGHPDPKDEDPDISKKGVRQDMSGDV-NKGASGWDNWSSAFGVNSSLAAEIARE-GETDNAAENVRPWTSTGAAES-------PAPSRSRHHHPKDPPPAGMMTVTVRRGSEETSLVTPIVLTESGGEDMDAETTRESEIGTASATAGVSVVTADSSILGSDESGGTRPRAVAVADKTVRVAEAKGAAPPAHADTPKSRRKQAERTKTPASAIAASEVAKPANPAPKQDADDAAVAGKISQIPSTTAPQ-IANE---------EAKGVSAMVPVALLRKGTAASEGDPPMTVSTPMTE---PAEEAARDV----VEPTEQLFMEDTQVYLGCGMCGVKYLVEAVDPGVSKSAQGQPTPEVLYLCTTCGATLRNNGEDGRWKRXXXXXXXXXXXXXXXSAFSVGGRDGGARANNEYGPPPGNGWN----GDRATALVESPSVVESLQQALQTGGGKRQGEN-DSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLASKPPLK--FFLP-------------LLMLG----------------------------------------------------------------------------------GGTDLAFS----------IPFSSQLRRWLVRQMQSWRRAKHCLRCRRATVTLQSAARAMSARRRCSTLRAARLRLWTDRVAAVYGNGGDEYSPSPVAAELLCELERLTTPLPRPPG----LSPTLASQP---PAVVKARGGLRANVA--CGRSRGRALAEALAPSMERPPPGCPAALDVDWGEWGVGLRLEFPCSP 934          
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: A0A835ZEY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.630e-11
Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  808 LFDRDHIMGVRKRDIEFIVSSGPRSERQKAN------SQRSLGELTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAW 1173
            L+DR H++    R I F   SG  +            S  +L  + +DW NDP STPARRRRLI++V +VIV SY+ A+  RV  FR + A AT +QA AR R A   Y A +  R+ +A + +QL W
Sbjct:   31 LYDRRHVLAQTARSIVFRRGSGSAAATDATTAAHTRLSHVALEVVAKDWINDPYSTPARRRRLIHEVSRVIVFSYKRAAAERVAAFRVECAAATVIQAHARRRFAAVIYTAALHERQVQACVRVQLWW 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEG7_ECTSI1.180e-7230.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBQ7_9PHAE3.330e-6730.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEY7_9STRA3.630e-1141.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1891contigH-paniculata_contig1891:2091..8410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_004760.1
Exons4
Model size5668
Cds size2925
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1891.4723.1prot_H-paniculata_contig1891.4723.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1891 2262..5838 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929453.0960555-UTR-H-paniculata_contig1891:2090..22611622929453.0960555-UTR-H-paniculata_contig1891:2090..2261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1891 2091..2261 +
1691480867.8180072-UTR-H-paniculata_contig1891:2090..22611691480867.8180072-UTR-H-paniculata_contig1891:2090..2261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1891 2091..2261 +
1622929453.1615403-UTR-H-paniculata_contig1891:5838..84101622929453.1615403-UTR-H-paniculata_contig1891:5838..8410Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1891 5839..8410 +
1691480867.8688595-UTR-H-paniculata_contig1891:5838..84101691480867.8688595-UTR-H-paniculata_contig1891:5838..8410Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1891 5839..8410 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929453.1119046-CDS-H-paniculata_contig1891:2261..26731622929453.1119046-CDS-H-paniculata_contig1891:2261..2673Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 2262..2673 +
1691480867.8272238-CDS-H-paniculata_contig1891:2261..26731691480867.8272238-CDS-H-paniculata_contig1891:2261..2673Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 2262..2673 +
1622929453.1225443-CDS-H-paniculata_contig1891:2775..35751622929453.1225443-CDS-H-paniculata_contig1891:2775..3575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 2776..3575 +
1691480867.8367486-CDS-H-paniculata_contig1891:2775..35751691480867.8367486-CDS-H-paniculata_contig1891:2775..3575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 2776..3575 +
1622929453.1351495-CDS-H-paniculata_contig1891:3753..50291622929453.1351495-CDS-H-paniculata_contig1891:3753..5029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 3754..5029 +
1691480867.8476458-CDS-H-paniculata_contig1891:3753..50291691480867.8476458-CDS-H-paniculata_contig1891:3753..5029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 3754..5029 +
1622929453.146999-CDS-H-paniculata_contig1891:5401..58381622929453.146999-CDS-H-paniculata_contig1891:5401..5838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 5402..5838 +
1691480867.8585222-CDS-H-paniculata_contig1891:5401..58381691480867.8585222-CDS-H-paniculata_contig1891:5401..5838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1891 5402..5838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1891.4723.1

>prot_H-paniculata_contig1891.4723.1 ID=prot_H-paniculata_contig1891.4723.1|Name=mRNA_H-paniculata_contig1891.4723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=975bp
MEGLTVVDVVDGSVAARHGGVVPGMFLVGVNKRSFAGFTQEAIMQVMQGI
ARQPRILSLARVGRNNAPAHGYNLATNICSARVRGAEALRAKTHDRVGPE
ANVHSIATPELWQENPNSQHLSRPSRSSSRIISTLSIELSTWDSDDEAWS
TGNFVTNCSSSPSNIPLFATWAQGSGRALSSKSDAVGRQENFFKQQDRIL
PLRFIGSRRNTSLFDRDHIMGVRKRDIEFIVSSGPRSERQKANSQRSLGE
LTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVAT
KLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDER
DRVRRAKQLTRAREDILRWKEESAKAEREKNETAGRRHRLELATLLQRRF
RSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARRYRQAQQQKD
RAMASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLSSLKITSAPSTRD
DGDQRSSEQSISDPSEKQLSVRDLNDSISQDKEDTTAAPWEKWAERSPLV
KAEGLDMTHYLNERDVRPRTAAAAVESKPLPIQMPISSATRHPAGMMTVK
VKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDS
RVMHGESIPALGEITGATTAGRCQTPVVPASTTQESFLHFDETPAVQGIA
DVLPMVFPLTGTAPEHAETLNPVGVPGTLNPGGVASDKSMTHNNHPDAQP
ILPVPPVATMARRNPLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFME
DSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQG
EDGRWRRRRRPSSAPAATRRRNFFLNMPSHAPNVPDSGGRGHAAVNGDDC
EERRENQRGVGAHHIDTGERMLKFRYACCASQIQHTYQNFRHRQYLRDWA
LALVSERTLSAGFVYPTRLSFFAI*
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mRNA from alignment at H-paniculata_contig1891:2091..8410+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1891.4723.1 ID=mRNA_H-paniculata_contig1891.4723.1|Name=mRNA_H-paniculata_contig1891.4723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6320bp|location=Sequence derived from alignment at H-paniculata_contig1891:2091..8410+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAATAAGCTGCGGCGAATCTCTACCTTCCAATTCTTTTGGTGCGTTCAA GCCACCGCCTGGCATTGAACCTGATGGAGATCCGAAAGCTGGTGGGGCCC CCACGGCTGATGTTATCATTAATACATACGAACCAGCTGGAATCACGTTC AAGTGGACGAAAACTTCAACAATGGAAGGGCTTACCGTTGTAGATGTTGT TGATGGATCCGTAGCAGCAAGGCATGGTGGAGTGGTTCCTGGTATGTTTT TGGTGGGGGTTAACAAGAGGTCGTTCGCAGGGTTTACCCAAGAGGCCATT ATGCAGGTTATGCAAGGCATCGCCAGGCAACCGCGTATATTGTCTCTTGC GCGCGTAGGCCGAAATAATGCACCTGCTCATGGTTATAATCTCGCTACAA ACATTTGTAGCGCAAGGGTTCGTGGTGCAGAAGCACTACGCGCGAAAACT CATGACAGGGTGGGACCTGAAGCAAACGTGCACAGTATTGCCACTCCCGA GCTGTGGCAAGAGAACCCAAACTCCCAACACCTTTCTAGACCATCACGCT CTTCGTCGAGAATTATATCCACCTTGTCTATAGGTGCTGCGACTACCTTG CAGCCACGTATAGATAGCTCATCTTACCTGTACCGCCGGCCAGCACCTGG CGAATCTTCAGGACGACTGCGGGCGGGCTCTGCAGAACTCTCTACCTGGG ACAGCGATGATGAAGCTTGGTCAACCGGCAATTTTGTGACCAACTGCTCA TCTTCACCCAGTAATATCCCTTTATTTGCTACGTGGGCACAAGGCAGCGG CAGAGCGTTGTCTTCTAAAAGCGACGCCGTTGGACGCCAAGAAAACTTCT TCAAACAACAAGACAGGATTCTGCCTCTGCGGTTTATCGGTAGCCGAAGG AATACTTCTTTGTTCGACAGAGATCACATTATGGGCGTGAGAAAACGCGA CATCGAGTTTATAGTGTCTAGTGGGCCGCGTTCGGAAAGGCAAAAGGCAA ACAGTCAGCGGAGTCTGGGGGAACTTACTAGAGACTGGAGAAACGACCCT TGCTCAACGCCGGCTCGACGTCGCCGACTTATCAATGACGTTTGTAAAGT TATTGTGAGAAGCTATGAGCATGCTTCCGTTATCCGAGTCGTGGACTTTA GACAACAAACAGCTGTGGCAACCAAACTCCAGGCGATCGCAAGGATGCGC GCTGCGCGAACACGGTATGCTGCAAAGATTTCCGCGCGTCGAGCCCGCGC AGCCTTGTGTCTACAGCTTGCATGGCTATCTCATATTGCCAGGAATCGAC TGTGGGTTCTCAGGGACGAAAGAGACCGAGTGAGAAGGGCAAAGCAACTG ACTCGTGCTCGGGAGGACATTCTTCGATGGAAAGAGGAGAGTGCAAAGGC AGAAAGGGAGAAAAACGAGACTGCAGGGAGACGACATAGGCTCGAGTTGG CCACGTTGCTGCAGAGACGGTTCAGGAGTCTACAGGTAACAACAACCGTG AAGACATTGATATGCTTTCGTAGAAAGTAAAGCAGAACCTCAATCTTCAT TAATTGTGTTACTTTTGGTCACTTTCAAGAGAACGCGCGACCAACAGTTG ACTTCCGAAAGCATGCAATAGTCACGAGTGCCTCATCCCATTCGCCGTTG CAACATCGTTCAGGAGCGTCGACGTCGGCAACGTGAACTAGATGTAGCAA AAGCTGCAATCATTCTGCAGACGGCGCTTCGAATACGTCGTGAGAGCATT CGATTTGGAAAATGTGCAAGAAGGTATCGGCAGGCGCAGCAACAGAAGGA TCGCGCCATGGCTAGCTCTCGTCTTATTCAGGTTGCTTGGAGACAACAGA AAGCAAAATACAAACTAAGCGGAAATGGCCGAGCCGCTTTGTCAGTGCTC TACCCAAACCTCAGTTCTCTCAAAATAACGAGCGCACCTTCCACGAGAGA TGATGGGGACCAACGATCCTCCGAGCAATCAATCTCGGATCCCTCAGAAA AACAATTGAGTGTACGGGACCTGAATGATTCAATATCTCAAGACAAAGAA GATACAACTGCAGCTCCATGGGAAAAATGGGCCGAACGAAGCCCTCTAGT TAAGGCAGAAGGGTTGGACATGACGCACTATTTAAATGAGAGGGATGTGA GACCACGAACTGCGGCAGCAGCAGTGGAGTCGAAACCGTTGCCGATTCAG ATGCCGATATCGTCAGCCACTCGACATCCTGCCGGCATGATGACTGTGAA GGTCAAGATTGGGAAGGAGGAAACCAGTTTGGTAACGCCGATCGTTGTGA CTGAAAACGACGATACTGAGGTGAGTGTGTCAGAGTCGGCAGAGAGAAGA GGTCCAAGAGAAAACAGTCATGGCTTCGCCAAACAAAACGATACTGACAG TCGTGTAATGCACGGAGAAAGCATTCCAGCTCTGGGCGAAATTACCGGTG CTACTACCGCAGGCAGATGCCAGACACCCGTTGTACCAGCGAGCACCACC CAGGAGTCGTTCTTGCATTTTGATGAAACACCGGCGGTGCAAGGGATTGC TGACGTTCTTCCGATGGTTTTTCCTTTGACCGGAACGGCACCTGAGCACG CGGAGACCTTGAACCCCGTAGGTGTACCCGGGACGTTGAACCCTGGCGGG GTTGCCAGCGACAAGTCGATGACGCACAACAACCACCCCGACGCACAACC GATTTTACCCGTTCCGCCTGTGGCAACGATGGCCAGGCGAAACCCCTTGC GAGCGACGACCAAAATCAACGAGAGAATATATCCTGTTGAAGGCAGCGAA GTTGATGTTCACCCGAGGCAAGTGGTTACGTCTGTAGACAGCTTCATGGA GGACAGCCAGGTGTATCTCGGGTGCTCGTTTTGCGGGGTCAAGTTTTTGG TGGAGGCGGTTGACGCTCGGCTTCCGGAGTCGGTGCAAGGTGCGTAACGT TTTCGCGAAAAACATCGCGCTTGACTTATGTTCTCTAACTGTTTTTTTGT GCCCAAAGAAAGTGTAAGCAGCTATTTACCTGCTACGGGAGACCACAGTG ATCGAGTGAAATAGTTCCATAGGTTTTAGAAATATGGCCAGCGAGCTACA GGTACTGTACCCATGGGATTTAAATGAAGCCACACCGACTGGTGTATCCC ACGCGAGACTTATCTACCCATCTTCCTCATATACGACTTCTAGCCTACTT TGTGTCCGGTACTTCCGACGGATCATCTGTCCTCATGATTTTCAACTCTA TATAACACCAAAAATACCAAAATGGCTGGTTTATCGTGAACAACATCTGC TGTTCTTTCAGGCCAACCTACACCAGAAGTGCTGTACCTCTGCACAACGT GCGGCGGCACGTTGAGGCAAGGTGAGGACGGCCGCTGGCGCCGCCGCCGC CGACCGAGCAGCGCACCGGCTGCAACCCGACGGAGAAATTTCTTCCTCAA TATGCCCTCGCACGCACCAAATGTACCCGATTCCGGGGGCAGGGGACATG CGGCCGTCAATGGTGACGATTGTGAGGAACGGCGAGAAAATCAGCGTGGT GTTGGTGCTCATCACATCGATACAGGCGAGAGGATGTTGAAATTTAGGTA CGCCTGCTGCGCAAGCCAAATACAGCACACGTATCAGAACTTTCGACATC GACAGTATCTGCGGGACTGGGCGTTGGCCTTGGTGAGTGAACGAACGTTG TCGGCAGGGTTCGTGTATCCGACTAGACTTTCGTTTTTTGCCATTTGAGG GAATGGTAAACTTCGCGTACTTGGAGTCACAAAAAGTCAGCAAACTAAAT TTCCCAACCTCTTGTAGCAGTAGGTCAACAATTAAACCTCTTCTTACCCA TATCTAGCACAAATGATTTGTGTGCGCAAAAACGTACTGCAATGAACATA TTCACAGCGGACAACGCGTACACGCAGCTTTGACCACAAAATGACCACAT AAGCTACCTGAACGCCGCTGCCGAACGCCATTCATTGAGTGCCACATATG GGGAGTGTTTTGGTAAGCTGCGGATGAACCAGTTTAGGGCGCGCTGCTAC AGTCTCGTTGCAACCTACCCCCCCTGTCCGTTTCCTCGAACAGCTGCGGC GCTGGCTCCTTTGTCGAGTGACAGCTCGACGTTTCTCACTCCTCCGCCTT CGGCAGGGGCGAGCAGCGGTATGTCTCCAATCCGCCGAGCGTGCGCGCTC CGCACGTGCCCGTGTCCGGACACTCCTTGACGCCAGGGTTCGCCTGTGGC TGGAGCGCTCATACGCGCTTCACAGACGAGAACGTCCTATCCGCCCTTCA CCGGTGGGTGAGCAGCTTTGGAGGGAGCGAAGTGATCACCCTGCCACGCG AAATCCTGGAGGATTTTGGTCAACGTCCGAAGACTTTGCAGCAGCATCTG CCGCAGCACCTGCAGCGTGTGCAAGCGAGGCCAATCTTAGTGGGGATACT CGTCCACGCAATGACCGTGCCAAAAGTAGAGCTCTGGCGGAGGCCCTTGC TCCTACAATGGGGGCTCCACCACCTGGGTGCCCCGATCCGCTTGATGTGG ACTGGGGCACATGGGGTCGTGAACTTGAGCTTGAATTTCCGCGCACGCCG TCTTCGCCCTTCGATATTGGGGGGCAATTAGGGCAACCCGGGCCGCCGGT GGGATTGAAGGGGGGTAAAAGGAGTTAGTTGTTGAAGCGTTCCAACATGT GATTACATACACGGCGCTGACCGAACTGATTCATCCGCACATGCTATCTG GCTATTCGGACAGTGGAAAGTTGAGGAAGCTGCGTTTCCGCCGTCCAGGA AGGACTCGAATACATGTCATGCGCATGCGGCTTGTTGTGCGGCTGGTCAT ACTACTAGAGCCTACTACACTTCTCGTACCCGTTGGCTAAACCTGGTGCA AACACAGGCAATTGGTATCCCGACAAAAACATACCGGTATCGGAGCGTCA TCGATCTCACACATTTATCTCTGATTCCGTCCCATGCGGACTACAGGCGT GGTCTGTTGGATCTAAGCGCGAAAGAGGCTGGTTCGTCGTACACGACACG TCATGTCATCACAATGGGGGGACGCAACAGATCTCAGGGGCAGTAAACTA TCATTAGGATTGGCACAATGGCAGTGATGCTTCCCTTTTGCTTCCCGTGA CGTCACCTGTACCTACACTACAGCAAGCTCATATCCACCCAAAAACAAGA TCTCAGATACACTGTTTTTACCACCCCCACCTCCAACTTTTCACAACGCC GTCGTTCCCCCATCAGCAATTACATCACTGGCCACGCAAAGAGTCCTCGC AATAAGCATCGCGAGCGGGAGAAAATACAAACACCTCACGTAAAAAACAT CCATTGCTGCATGCGGTTCTCGACCCAACCGAAGAGCAGTCGTGCGCCTG TCCTTTTAAATCGTGATCTACACAACACATACTTCTTTGAGTACATTAGA TACGCCCGGAGTGATTGAGCAGCTGTAGGTGTTTGTAGAATGCGAATCAC GCACATCAGTACACATATTTCCATACAAAAATTGGGGCAACTAAAACACT GCACACGCTCTTGCTAGGCCAATCGTATGCCCAATAAAAATGGTTTTGTC TGTACACGATCCACTTTCTCACAGAACTACTTACTCGGCAACCTTACGGC GTCAGTACCCAATAACCAACCCCCCCCTCCCTTAATAAAAGTCAAGCATA AGAGTAAAGTGACCATCTAAGAGACTCCTTCCTTTAGGGCACCATGCGAC AAATCTCCACGAAAAACAACGGACACACACATACCCAACAAAGGTTCAAC ACCGAACAGACTATACCCAGCAACGAGTGGCACCTAGAAAATACGCACAA AAATATACCCGAACACGACCAGAGAAATCACGCCGTACACGCGCGCACAT ATATTGGCACTGACAACGTAAAGAAAGAACCCCTCCCCCGAAAGAACTCT AGAGATAGAACCAAGAGTAAAAAAAATCACCCCACAATGTTTCGACACAG CAGGATCGTCTAGTACAAAGCCCTCAACCAAAACCATGACCAGCCTCTAT GCACAAACCCACGCAACTCGAAAAGGACCTCATAATTCTAGTCCACAATA CCATAATGCGATGCTGCGGTGCGTCCTCTTGGGCGGGTTGCATACGAACC AATCCCAGCAGATTCACTTTCCGCTGTTCGTTCTTTCCCTTCCAGGAACA CTCTCGTCCCTTTTATCAAGCAAATTCGGACACATGAATACATACAGCCC CTAGGCAATTTTCACCCCACCCCCCTTCCCTTCTTCCCAACCAAACGCGT AGCTATGACATCGACAACAC
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Coding sequence (CDS) from alignment at H-paniculata_contig1891:2091..8410+

>mRNA_H-paniculata_contig1891.4723.1 ID=mRNA_H-paniculata_contig1891.4723.1|Name=mRNA_H-paniculata_contig1891.4723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5850bp|location=Sequence derived from alignment at H-paniculata_contig1891:2091..8410+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGGGCTTACCGTTGTAGATGTTGTTGATGGATCCGTAGCAGCAAG
GCATGGTGGAGTGGTTCCTGGTATGTTTTTGGTGGGGGTTAACAAGAGGT
CGTTCGCAGGGTTTACCCAAGAGGCCATTATGCAGGTTATGCAAGGCATC
GCCAGGCAACCGCGTATATTGTCTCTTGCGCGCGTAGGCCGAAATAATGC
ACCTGCTCATGGTTATAATCTCGCTACAAACATTTGTAGCGCAAGGGTTC
GTGGTGCAGAAGCACTACGCGCGAAAACTCATGACAGGGTGGGACCTGAA
GCAAACGTGCACAGTATTGCCACTCCCGAGCTGTGGCAAGAGAACCCAAA
CTCCCAACACCTTTCTAGACCATCACGCTCTTCGTCGAGAATTATATCCA
CCTTGTCTATAGATGGAAGGGCTTACCGTTGTAGATGTTGTTGATGGATC
CGTAGCAGCAAGGCATGGTGGAGTGGTTCCTGGTATGTTTTTGGTGGGGG
TTAACAAGAGGTCGTTCGCAGGGTTTACCCAAGAGGCCATTATGCAGGTT
ATGCAAGGCATCGCCAGGCAACCGCGTATATTGTCTCTTGCGCGCGTAGG
CCGAAATAATGCACCTGCTCATGGTTATAATCTCGCTACAAACATTTGTA
GCGCAAGGGTTCGTGGTGCAGAAGCACTACGCGCGAAAACTCATGACAGG
GTGGGACCTGAAGCAAACGTGCACAGTATTGCCACTCCCGAGCTGTGGCA
AGAGAACCCAAACTCCCAACACCTTTCTAGACCATCACGCTCTTCGTCGA
GAATTATATCCACCTTGTCTATAGAACTCTCTACCTGGGACAGCGATGAT
GAAGCTTGGTCAACCGGCAATTTTGTGACCAACTGCTCATCTTCACCCAG
TAATATCCCTTTATTTGCTACGTGGGCACAAGGCAGCGGCAGAGCGTTGT
CTTCTAAAAGCGACGCCGTTGGACGCCAAGAAAACTTCTTCAAACAACAA
GACAGGATTCTGCCTCTGCGGTTTATCGGTAGCCGAAGGAATACTTCTTT
GTTCGACAGAGATCACATTATGGGCGTGAGAAAACGCGACATCGAGTTTA
TAGTGTCTAGTGGGCCGCGTTCGGAAAGGCAAAAGGCAAACAGTCAGCGG
AGTCTGGGGGAACTTACTAGAGACTGGAGAAACGACCCTTGCTCAACGCC
GGCTCGACGTCGCCGACTTATCAATGACGTTTGTAAAGTTATTGTGAGAA
GCTATGAGCATGCTTCCGTTATCCGAGTCGTGGACTTTAGACAACAAACA
GCTGTGGCAACCAAACTCCAGGCGATCGCAAGGATGCGCGCTGCGCGAAC
ACGGTATGCTGCAAAGATTTCCGCGCGTCGAGCCCGCGCAGCCTTGTGTC
TACAGCTTGCATGGCTATCTCATATTGCCAGGAATCGACTGTGGGTTCTC
AGGGACGAAAGAGACCGAGTGAGAAGGGCAAAGCAACTGACTCGTGCTCG
GGAGGACATTCTTCGATGGAAAGAGGAGAGTGCAAAGGCAGAAAGGGAGA
AAAACGAGACTGCAGGGAGACGACATAGGCTCGAGTTGGCCACGTTGCTG
CAGAGACGGTTCAGGAGTCTACAGAACTCTCTACCTGGGACAGCGATGAT
GAAGCTTGGTCAACCGGCAATTTTGTGACCAACTGCTCATCTTCACCCAG
TAATATCCCTTTATTTGCTACGTGGGCACAAGGCAGCGGCAGAGCGTTGT
CTTCTAAAAGCGACGCCGTTGGACGCCAAGAAAACTTCTTCAAACAACAA
GACAGGATTCTGCCTCTGCGGTTTATCGGTAGCCGAAGGAATACTTCTTT
GTTCGACAGAGATCACATTATGGGCGTGAGAAAACGCGACATCGAGTTTA
TAGTGTCTAGTGGGCCGCGTTCGGAAAGGCAAAAGGCAAACAGTCAGCGG
AGTCTGGGGGAACTTACTAGAGACTGGAGAAACGACCCTTGCTCAACGCC
GGCTCGACGTCGCCGACTTATCAATGACGTTTGTAAAGTTATTGTGAGAA
GCTATGAGCATGCTTCCGTTATCCGAGTCGTGGACTTTAGACAACAAACA
GCTGTGGCAACCAAACTCCAGGCGATCGCAAGGATGCGCGCTGCGCGAAC
ACGGTATGCTGCAAAGATTTCCGCGCGTCGAGCCCGCGCAGCCTTGTGTC
TACAGCTTGCATGGCTATCTCATATTGCCAGGAATCGACTGTGGGTTCTC
AGGGACGAAAGAGACCGAGTGAGAAGGGCAAAGCAACTGACTCGTGCTCG
GGAGGACATTCTTCGATGGAAAGAGGAGAGTGCAAAGGCAGAAAGGGAGA
AAAACGAGACTGCAGGGAGACGACATAGGCTCGAGTTGGCCACGTTGCTG
CAGAGACGGTTCAGGAGTCTACAGGAGCGTCGACGTCGGCAACGTGAACT
AGATGTAGCAAAAGCTGCAATCATTCTGCAGACGGCGCTTCGAATACGTC
GTGAGAGCATTCGATTTGGAAAATGTGCAAGAAGGTATCGGCAGGCGCAG
CAACAGAAGGATCGCGCCATGGCTAGCTCTCGTCTTATTCAGGTTGCTTG
GAGACAACAGAAAGCAAAATACAAACTAAGCGGAAATGGCCGAGCCGCTT
TGTCAGTGCTCTACCCAAACCTCAGTTCTCTCAAAATAACGAGCGCACCT
TCCACGAGAGATGATGGGGACCAACGATCCTCCGAGCAATCAATCTCGGA
TCCCTCAGAAAAACAATTGAGTGTACGGGACCTGAATGATTCAATATCTC
AAGACAAAGAAGATACAACTGCAGCTCCATGGGAAAAATGGGCCGAACGA
AGCCCTCTAGTTAAGGCAGAAGGGTTGGACATGACGCACTATTTAAATGA
GAGGGATGTGAGACCACGAACTGCGGCAGCAGCAGTGGAGTCGAAACCGT
TGCCGATTCAGATGCCGATATCGTCAGCCACTCGACATCCTGCCGGCATG
ATGACTGTGAAGGTCAAGATTGGGAAGGAGGAAACCAGTTTGGTAACGCC
GATCGTTGTGACTGAAAACGACGATACTGAGGTGAGTGTGTCAGAGTCGG
CAGAGAGAAGAGGTCCAAGAGAAAACAGTCATGGCTTCGCCAAACAAAAC
GATACTGACAGTCGTGTAATGCACGGAGAAAGCATTCCAGCTCTGGGCGA
AATTACCGGTGCTACTACCGCAGGCAGATGCCAGACACCCGTTGTACCAG
CGAGCACCACCCAGGAGTCGTTCTTGCATTTTGATGAAACACCGGCGGTG
CAAGGGATTGCTGACGTTCTTCCGATGGTTTTTCCTTTGACCGGAACGGC
ACCTGAGCACGCGGAGACCTTGAACCCCGTAGGTGTACCCGGGACGTTGA
ACCCTGGCGGGGTTGCCAGCGACAAGTCGATGACGCACAACAACCACCCC
GACGCACAACCGATTTTACCCGTTCCGCCTGTGGCAACGATGGCCAGGCG
AAACCCCTTGCGAGCGACGACCAAAATCAACGAGAGAATATATCCTGTTG
AAGGCAGCGAAGTTGATGTTCACCCGAGGCAAGTGGTTACGTCTGTAGAC
AGCTTCATGGAGGACAGCCAGGTGTATCTCGGGTGCTCGTTTTGCGGGGT
CAAGTTTTTGGTGGAGGCGGTTGACGCTCGGCTTCCGGAGTCGGTGCAAG
GAGCGTCGACGTCGGCAACGTGAACTAGATGTAGCAAAAGCTGCAATCAT
TCTGCAGACGGCGCTTCGAATACGTCGTGAGAGCATTCGATTTGGAAAAT
GTGCAAGAAGGTATCGGCAGGCGCAGCAACAGAAGGATCGCGCCATGGCT
AGCTCTCGTCTTATTCAGGTTGCTTGGAGACAACAGAAAGCAAAATACAA
ACTAAGCGGAAATGGCCGAGCCGCTTTGTCAGTGCTCTACCCAAACCTCA
GTTCTCTCAAAATAACGAGCGCACCTTCCACGAGAGATGATGGGGACCAA
CGATCCTCCGAGCAATCAATCTCGGATCCCTCAGAAAAACAATTGAGTGT
ACGGGACCTGAATGATTCAATATCTCAAGACAAAGAAGATACAACTGCAG
CTCCATGGGAAAAATGGGCCGAACGAAGCCCTCTAGTTAAGGCAGAAGGG
TTGGACATGACGCACTATTTAAATGAGAGGGATGTGAGACCACGAACTGC
GGCAGCAGCAGTGGAGTCGAAACCGTTGCCGATTCAGATGCCGATATCGT
CAGCCACTCGACATCCTGCCGGCATGATGACTGTGAAGGTCAAGATTGGG
AAGGAGGAAACCAGTTTGGTAACGCCGATCGTTGTGACTGAAAACGACGA
TACTGAGGTGAGTGTGTCAGAGTCGGCAGAGAGAAGAGGTCCAAGAGAAA
ACAGTCATGGCTTCGCCAAACAAAACGATACTGACAGTCGTGTAATGCAC
GGAGAAAGCATTCCAGCTCTGGGCGAAATTACCGGTGCTACTACCGCAGG
CAGATGCCAGACACCCGTTGTACCAGCGAGCACCACCCAGGAGTCGTTCT
TGCATTTTGATGAAACACCGGCGGTGCAAGGGATTGCTGACGTTCTTCCG
ATGGTTTTTCCTTTGACCGGAACGGCACCTGAGCACGCGGAGACCTTGAA
CCCCGTAGGTGTACCCGGGACGTTGAACCCTGGCGGGGTTGCCAGCGACA
AGTCGATGACGCACAACAACCACCCCGACGCACAACCGATTTTACCCGTT
CCGCCTGTGGCAACGATGGCCAGGCGAAACCCCTTGCGAGCGACGACCAA
AATCAACGAGAGAATATATCCTGTTGAAGGCAGCGAAGTTGATGTTCACC
CGAGGCAAGTGGTTACGTCTGTAGACAGCTTCATGGAGGACAGCCAGGTG
TATCTCGGGTGCTCGTTTTGCGGGGTCAAGTTTTTGGTGGAGGCGGTTGA
CGCTCGGCTTCCGGAGTCGGTGCAAGGCCAACCTACACCAGAAGTGCTGT
ACCTCTGCACAACGTGCGGCGGCACGTTGAGGCAAGGTGAGGACGGCCGC
TGGCGCCGCCGCCGCCGACCGAGCAGCGCACCGGCTGCAACCCGACGGAG
AAATTTCTTCCTCAATATGCCCTCGCACGCACCAAATGTACCCGATTCCG
GGGGCAGGGGACATGCGGCCGTCAATGGTGACGATTGTGAGGAACGGCGA
GAAAATCAGCGTGGTGTTGGTGCTCATCACATCGATACAGGCGAGAGGAT
GTTGAAATTTAGGTACGCCTGCTGCGCAAGCCAAATACAGCACACGTATC
AGAACTTTCGACATCGACAGTATCTGCGGGACTGGGCGTTGGCCTTGGTG
AGTGAACGAACGTTGTCGGCAGGGTTCGTGTATCCGACTAGACTTTCGTT
TTTTGCCATTTGAGCCAACCTACACCAGAAGTGCTGTACCTCTGCACAAC
GTGCGGCGGCACGTTGAGGCAAGGTGAGGACGGCCGCTGGCGCCGCCGCC
GCCGACCGAGCAGCGCACCGGCTGCAACCCGACGGAGAAATTTCTTCCTC
AATATGCCCTCGCACGCACCAAATGTACCCGATTCCGGGGGCAGGGGACA
TGCGGCCGTCAATGGTGACGATTGTGAGGAACGGCGAGAAAATCAGCGTG
GTGTTGGTGCTCATCACATCGATACAGGCGAGAGGATGTTGAAATTTAGG
TACGCCTGCTGCGCAAGCCAAATACAGCACACGTATCAGAACTTTCGACA
TCGACAGTATCTGCGGGACTGGGCGTTGGCCTTGGTGAGTGAACGAACGT
TGTCGGCAGGGTTCGTGTATCCGACTAGACTTTCGTTTTTTGCCATTTGA
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