prot_H-paniculata_contig18835.4695.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18835.4695.1
Unique Nameprot_H-paniculata_contig18835.4695.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.930e-66
Identity = 107/156 (68.59%), Postives = 126/156 (80.77%), Query Frame = 0
Query:    1 RINDGFVEKANSFGEDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFWVTLNAAKTVTALLGGSPVEVKRLP 156
            RINDG VEKA+  G+D+E AKPY  +L+  S +LY GSL AIGAMFHYF GC  N+LV+SLTLI+++ +T +QL+GGEGNLL SAVVT+YATFLCFSAVSKTP  SCNPFVGE N   VLIG+ LT+ SLFWVTLNAA+TVTALLGG   EV+  P
Sbjct:  178 RINDGLVEKASEHGDDSEEAKPYLCALLTASGVLYTGSLCAIGAMFHYFQGCAENELVMSLTLILAVAITALQLLGGEGNLLASAVVTSYATFLCFSAVSKTPTSSCNPFVGESNTTVVLIGIALTVLSLFWVTLNAARTVTALLGGQANEVEEAP 333          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.390e-38
Identity = 74/146 (50.68%), Postives = 103/146 (70.55%), Query Frame = 0
Query:    3 NDGFVEKANSFGEDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGE-ENYASVLIGLGLTIFSLFWVTLNAAKTVTALLGG 147
            ND  V+KA   GED EG K   V+L+  S +L+  +++ +G +F YF GC SND+++SLTLI+ + +TV+QL G EGNLLTSA+V+ Y TFL FSAVSK P  SCNPF+G  +N  S+++GL LT  SL W+  ++  ++T LLGG
Sbjct:  178 NDACVKKAQDLGEDGEGRK-VLVALVCTSLLLFAVAISGVGVLFGYFKGCQSNDIILSLTLIMIVAMTVLQLSGPEGNLLTSALVSVYMTFLGFSAVSKNPDASCNPFIGSSQNLTSIIVGLVLTFLSLLWICASSGTSITKLLGG 322          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.120e-30
Identity = 58/132 (43.94%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    3 NDGFVEKANS--FGEDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFW 132
            N+ +VEKA+     E  +  K +  +++V  AI Y+GS+  I  M+ YF+GC SN+  IS+TL +S++VT +QL G E +LLTSA++ AY+T+LC++AVS+ P D CNP +G+E+   +++G+GL + SL W
Sbjct:  198 NESWVEKADKAELEEGVDQGKKWLAAILVSCAIFYIGSIVVISLMYVYFSGCASNEAFISVTLAMSVIVTAVQLSGEESSLLTSAIIVAYSTYLCYTAVSRNPNDECNPQLGDEDILGIVLGIGLCLLSLTW 329          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7R9WZ09_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ09_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.630e-29
Identity = 53/129 (41.09%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    3 NDGFVEKANSF-GEDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSL 130
            ND +VE++N    E+    + + ++++V +A++++ S    G M HYF GCP N+  I++T+++ +++T  QL GGEG+LL S+++T YAT LC+SAVSK P   CNPF+GE+++  + IG+G T+ +L
Sbjct:  252 NDSWVERSNKAEAEEVGSGRNWLIAIVVSAAMMFITSFVGWGLMIHYFAGCPDNNAFIAITIVLCVIITGAQLSGGEGSLLASSLITLYATSLCYSAVSKNPDRDCNPFLGEDDFLGIFIGVGFTVVAL 380          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A1E7F563_9STRA (Serinc-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F563_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.150e-28
Identity = 59/146 (40.41%), Postives = 100/146 (68.49%), Query Frame = 0
Query:    3 NDGFVEKANSFGEDTEGA-KPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFWVTLNAAKTVTALLGG 147
            NDG+V+++     +  G+ + + +++++ +A L+L S+     +F++F+GC +N   ISLT+I+S++VT  QL G EG+LL S+++TAYAT LC++AV++ P   CNP +G ++  S++IGLGLTI SL +V    + T  + LGG
Sbjct:  187 NDGWVDRSEKADAEESGSGQKWLIAIVISAAFLFLVSIVGWVLLFYFFSGCATNTAFISLTIILSLLVTGTQLSGSEGSLLASSLITAYATMLCYNAVTRNPNSDCNPQLGGDDNLSIIIGLGLTIVSLSYV--GWSTTADSALGG 330          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7S3QC27_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC27_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.210e-28
Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = 0
Query:    2 INDGFVEKANSFGEDT-EGA-KPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFW 132
            +N+ +V K +    D  EGA K +F +L+   A+LYL S  AIG M+++F+GC +N   I++TLIV I+ T +QL G E +L  SA + AY+TFL ++AVSK P D CNP +GEEN   +++G+GLT+  + W
Sbjct:  200 VNESWVAKGDQAELDEGEGAGKKWFGALLATCALLYLASFVAIGLMYYFFSGCGTNTAFITITLIVGIVSTGIQLTGEEASLFASAAIFAYSTFLLYTAVSKNPNDECNPQLGEENVLGIVLGVGLTMIGVLW 332          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7S2E8Y5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E8Y5_TRICV)

HSP 1 Score: 114 bits (285), Expect = 8.090e-27
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    3 NDGFVEKANSFGEDTEGAKPYFVSLIVFSAI-LYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFW 132
            N+ +V++AN    +  G+   ++  IV + + +Y  +LA IG +FHY+ GCP N+ V+SLTLI  +++TV+QL G EG+LLTS+V++AYA +L FS VSK P  +CNP +G  +   +  GL LT  SL W
Sbjct:  195 NESWVDRANECDREEWGSGRAWLRAIVATCVAMYAAALAGIGFLFHYYKGCPENNAVVSLTLIGIVVITVVQLTGTEGSLLTSSVISAYAVYLAFSIVSKNPNGACNPNLGSNDAWGIAAGLFLTAVSLAW 325          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7R9VDP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VDP0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.930e-25
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0
Query:   26 SLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFW 132
            ++I    ++Y  SLA IG ++ +F+GCP N+ V +LTLI  + +TV+QL G EG+LLTS+V++AY T+L +S VSK P   CNP +G  +   + IGL LT  SL W
Sbjct:   11 AIIAMCVVMYSASLAGIGLLYQFFSGCPENNAVTTLTLIGIVAITVVQLSGTEGSLLTSSVISAYVTYLAYSLVSKNPNGQCNPQLGTNDAWGIAIGLVLTAISLAW 117          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7S4QFA3_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFA3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.920e-25
Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = 0
Query:    3 NDGFVEKANSFG--EDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFW 132
            N+ +VEK+N     E     K +  ++I   A+ Y+ S   +G M+H++ GC  N+ +IS+TL+  I VT +QL G EG+LLTS++++ YAT+L FSA+SK P  +CNP +G  +   +++GL LT  SL W
Sbjct:  259 NESWVEKSNECDRVEFYGAGKKWLRAIIAMCALFYIMSFTGVGLMYHFYLGCALNNAIISITLVGIIAVTAIQLTGTEGSLLTSSILSLYATYLAFSAISKNPDATCNPHLGSNDVGGIILGLLLTFMSLAW 390          
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Match: A0A7S2PAW5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAW5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.090e-25
Identity = 59/145 (40.69%), Postives = 97/145 (66.90%), Query Frame = 0
Query:    3 NDGFVEKANSFG-EDTEGAKPYFVSLIVFSAIL-YLGSLAAIGAMFHYFTGCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVSKTPRDSCNPFVGEENYASVLIGLGLTIFSLFWV--TLNAAKTVTA 143
            ND +V  AN+   E+  GA   +++ I+  A+L ++ S+ +IG M+HY+ GC  N+  IS+TLI+ + +T +QL G +G+LLTSA+++AYA +L F+++SK P   CNP +GE N   ++IG+G T+ SL W   +L A K +++
Sbjct:  201 NDAWVINANTADRENGVGAGNKWLAAILGMAVLTFIFSITSIGLMYHYYGGCDINEAFISITLIMIVAITGVQLSGEDGSLLTSAIISAYAAYLAFTSMSKNPDGDCNPRLGENNALGIVIGVGFTLISLTWAGFSLTAEKRLSS 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18835.4695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C2_ECTSI2.930e-6668.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA1.390e-3850.68Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A7S2I2C9_9STRA1.120e-3043.94Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9WZ09_9STRA3.630e-2941.09Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A1E7F563_9STRA5.150e-2840.41Serinc-domain-containing protein n=1 Tax=Fragilari... [more]
A0A7S3QC27_9STRA7.210e-2845.11Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2E8Y5_TRICV8.090e-2744.27Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9VDP0_9STRA1.930e-2546.73Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4QFA3_9STRA3.920e-2540.91Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S2PAW5_9STRA7.090e-2540.69Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 3..140
e-value: 2.0E-28
score: 99.5
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 4..145
IPR029559Membrane protein Tms1-likePANTHERPTHR10383:SF9SERINE INCORPORATOR 3coord: 4..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..118
NoneNo IPR availableTMHMMTMhelixcoord: 57..76
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18835contigH-paniculata_contig18835:2078..4865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18835.4695.1mRNA_H-paniculata_contig18835.4695.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18835 2078..4865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18835.4695.1 ID=prot_H-paniculata_contig18835.4695.1|Name=mRNA_H-paniculata_contig18835.4695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
RINDGFVEKANSFGEDTEGAKPYFVSLIVFSAILYLGSLAAIGAMFHYFT
GCPSNDLVISLTLIVSIMVTVMQLVGGEGNLLTSAVVTAYATFLCFSAVS
KTPRDSCNPFVGEENYASVLIGLGLTIFSLFWVTLNAAKTVTALLGGSPV
EVKRLPSEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS
IPR029559Tms1-like