mRNA_H-paniculata_contig18826.4689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A6H5K8W7_9PHAE (EGF-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8W7_9PHAE) HSP 1 Score: 419 bits (1077), Expect = 2.650e-144 Identity = 182/222 (81.98%), Postives = 206/222 (92.79%), Query Frame = 1
Query: 1 RW-MLPTAIGAVMLGVSLFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQVQC 663
RW +LP + V++ +S+FLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEE ETGDC+DRTCPYEIAW+D+PD++GAHHTYAECANKG CDRT GECVCFEGYEGK C+RM+CPNDCSGHGRCM+AD+LPYGVN+GS+Y+DQ+N TD++GELG TNGNDAVTF Y+GWDEGKTRMC+CDPGYEGVDCSYRSCP+GNDVMVERLNRVASVKYQKQ C
Sbjct: 4 RWTLLPATLFGVLVSLSVFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEEFFETGDCSDRTCPYEIAWSDFPDDSGAHHTYAECANKGTCDRTTGECVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAIC 225
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A835ZF98_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA) HSP 1 Score: 271 bits (694), Expect = 8.340e-84 Identity = 128/215 (59.53%), Postives = 155/215 (72.09%), Query Frame = 1
Query: 19 AIGAVMLGVSLFLPSAEAGCCPNACSGHGTCTV--DDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCP-----NDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGE-LGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASV 639
A+ A +LG++ + +A GCCPNACSGHG+C+ AC CY NWQ+GE + E GDCA+RTCPYEIAW D P G HH YAECANKGICDRT GEC CF GYEGKAC RM+CP NDCSGHGRC++A+++PYGVNVGS AT + LG +NGNDA TFTYY WD +TR+C CD +EGVDC RSCP+G+DVM ++V S+
Sbjct: 9 ALAAAILGINTVVLAAG-GCCPNACSGHGSCSAGASAACYCYPNWQSGEMAGEAGDCAERTCPYEIAWADAPGSGGEHHQYAECANKGICDRTSGECNCFAGYEGKACGRMSCPMDKDGNDCSGHGRCLFANDVPYGVNVGS-------ATQLLDTFLGDSNGNDAETFTYYNWDNERTRLCVCDAEWEGVDCGKRSCPKGDDVMDTNGDQVQSI 215
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: F0YDW6_AURAN (EGF-like domain-containing protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDW6_AURAN) HSP 1 Score: 226 bits (577), Expect = 2.130e-69 Identity = 104/198 (52.53%), Postives = 129/198 (65.15%), Query Frame = 1
Query: 34 MLGVSLFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYY-GWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLN 624
+L ++L L A A C PN+CSGHGTC DD C CY +W G++ E GDC+DR CPY++AW+ PD G HTYAECA GICDR+ G+C CFEGY GK C TCPNDCSGHG C YA++ P+G G YY + N+ +G D VT WD GK ++C C+PGY +DCS R CP+GNDV+ ERLN
Sbjct: 3 LLSLALALGLAAASC-PNSCSGHGTCGSDDTCTCYQDWVMGDQ--EGGDCSDRKCPYQVAWSASPDRDGNIHTYAECAGVGICDRSTGDCECFEGYTGKGCGIQTCPNDCSGHGACTYAEDAPFGTVWGDYYTAKSNSLTGLGT-------DPVTLAQAPAWDSGKVKLCVCEPGYTDIDCSRRMCPKGNDVLDERLN 190
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A7S3JQM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQM4_9STRA) HSP 1 Score: 227 bits (578), Expect = 7.040e-69 Identity = 108/202 (53.47%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 49 LFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQ 654
+ +P + CPN+CSGHGTC DD C CY+NW G++ E GDC+DR CPY+IAW ++ G HTYAECA GICDRT GEC CFEG+ GK C MTCPNDCSGHG C Y ++ YGV G YY D + + LG + AV W GK R+C+CD GY +DCS R CP+GNDV+ ERLN V ++KYQKQ
Sbjct: 7 VLVPGSVLAACPNSCSGHGTCGSDDTCTCYANWLMGDQ--EGGDCSDRACPYQIAWATATNKGGNVHTYAECAGVGICDRTKGECDCFEGFTGKGCGVMTCPNDCSGHGTCEYLEDYGYGVVWGDYY---DGSIATLTGLGT---DAAVIPQPPDWATGKMRICRCDAGYTDLDCSRRMCPKGNDVLDERLNLVTALKYQKQ 200
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A482T0D4_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0D4_9ARCH) HSP 1 Score: 216 bits (551), Expect = 5.910e-68 Identity = 100/190 (52.63%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 79 CPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQ 648
C N CSGHGTC DD C CY NW G S ++GDC+DR CP+E+AW D PD+TGA H YAECAN+G+C+R IGECVCF+GYEGK C R TCPNDCSGHG C Y ++L + N Y + Y E D TF Y+ WD+ K+R C CD Y +DCS R CP GNDV+ + + ++ KYQ
Sbjct: 20 CDNNCSGHGTCMTDDVCQCYDNWGVGL-SHDSGDCSDRICPFELAWVDTPDQTGAFHKYAECANRGVCNREIGECVCFDGYEGKGCQRTTCPNDCSGHGTCEYVEDLYFAANWHDY------SEKYFIE-------DPKTFPYHHWDQRKSRACVCDATYGDIDCSKRLCPYGNDVL-DVQDDLSITKYQ 194
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A8J2SH41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH41_9STRA) HSP 1 Score: 226 bits (577), Expect = 3.400e-67 Identity = 104/193 (53.89%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 79 CPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYY-GWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQ 654
CPN+CSGHGTC DD C CY +W G++ GDC+DR CPY++AW+ PD+TG HTYAECA GICDR G+C CFEGY G+ C TCPNDCSGHG C+YA+++ +G G Y N G LG AV WD GK RMC CDPGY +DCS R CP+GNDVM ERL+ V ++KY +Q
Sbjct: 86 CPNSCSGHGTCGADDTCTCYQDWVMGDQDG--GDCSDRRCPYQVAWSAGPDKTGNIHTYAECAGVGICDRGSGDCECFEGYTGRGCGLQTCPNDCSGHGECVYAEDVTFGTVYGDY-----NVDAPSGGLGVG----AVKIPQKPNWDSGKVRMCVCDPGYTDIDCSRRMCPKGNDVMDERLDLVTALKYHRQ 267
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A8J2X3H4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3H4_9STRA) HSP 1 Score: 221 bits (564), Expect = 4.340e-66 Identity = 102/192 (53.12%), Postives = 124/192 (64.58%), Query Frame = 1
Query: 79 CPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQ 654
CPN+CSGHGTC DD C CY +W G++ GDC+DR CPY++AW+ PD+TG HTYAECA GICDR G+C CFEGY G+ C TC NDCSGHG C+YA+++ +G G Y D D + G G V WD GK RMC C+PGY +DCS R CP+GNDVM ERL+ S+KYQ Q
Sbjct: 17 CPNSCSGHGTCGADDTCTCYQDWVMGDQDG--GDCSDRRCPYQVAWSAGPDKTGNIHTYAECAGVGICDRGSGDCECFEGYTGRGCGLQTCQNDCSGHGECVYAEDVTFGTVYGDYAGVPDANGDIVAS-GVGVGASKVP-QKPNWDSGKVRMCVCEPGYTDIDCSRRMCPKGNDVMDERLDLTTSLKYQTQ 204
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: C4B7Q7_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q7_OCHDN) HSP 1 Score: 216 bits (550), Expect = 1.280e-65 Identity = 102/198 (51.52%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 79 CPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQVQCSAV 672
C N CSGHGTC+ DD C CY NW G S ++GDC+DR CPYE+AW D PD T A H YAECAN+GIC+R GEC CF+GYEGK C R TCPN CSGHG C Y +EL +G Y + Y E D TF Y+GWD K R C CDP Y VDCS R CP GNDV+ + N + + +Q++ A+
Sbjct: 20 CDNNCSGHGTCSTDDVCECYDNWGVGL-SHDSGDCSDRICPYELAWVDTPDNTVAFHKYAECANRGICNRETGECQCFDGYEGKGCQRSTCPNACSGHGTCEYIEELAFGETWNDY------SKQYFIE-------DPKTFPYHGWDNRKIRTCVCDPTYGDVDCSKRLCPYGNDVLDIQDNSIITNYQIQQIRIKAI 203
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A7S0L985_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L985_9EUKA) HSP 1 Score: 215 bits (547), Expect = 5.030e-65 Identity = 100/207 (48.31%), Postives = 128/207 (61.84%), Query Frame = 1
Query: 34 MLGVSLFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYGWDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQ 654
++ ++ F+ + +A C NACSGHG C C C+ NW G +GDC++R CP+E+AW D PD G HH YAEC+NKGIC+R GEC CF GYEGK C R +CPNDCSGHGRC Y +++P+G Y N ++ + D TF YYGWD KTR C+CDP Y VDCS R C GNDVM +R + + +YQ Q
Sbjct: 5 IIALASFVAAVQAAC-DNACSGHGKCGAKGICDCFDNWGIGL-GHLSGDCSERICPFELAWVDTPDSVGNHHRYAECSNKGICNRGSGECECFPGYEGKGCQRTSCPNDCSGHGRCKYIEDMPFGQVQADYQNAVTGIDSFLPQ-------DPHTFPYYGWDSYKTRGCECDPEYGDVDCSKRLCQHGNDVMDQRDDLLDPHQYQVQ 202
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Match: A0A8J2T0B3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0B3_9STRA) HSP 1 Score: 217 bits (552), Expect = 3.520e-63 Identity = 101/201 (50.25%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 79 CPNACSGHGTCTVDDACVCYSNWQNGEESSETGDCADRTCPYEIAWTDYPDETGAHHTYAECANKGICDRTIGECVCFEGYEGKACSRMTCPNDCSGHGRCMYADELPYGVNVGSYYNDQDNATDYMGELGQTNGNDAVTFTYYG---------WDEGKTRMCKCDPGYEGVDCSYRSCPEGNDVMVERLNRVASVKYQKQ 654
CPN+CSGHGTC DD C CY +W G++ GDC+DR CPY++AW+ PD+TG HTYAECA G+CDR G+C CFEGY G+ C TCPNDCSGHG+C+YA+++ +G G DY G + NGN G WD GK RMC C+PGY +DCS R CP+GNDVM ER N + K Q Q
Sbjct: 17 CPNSCSGHGTCGADDTCTCYQDWVMGDQDG--GDCSDRRCPYQVAWSAGPDKTGNIHTYAECAGVGVCDRGSGDCECFEGYAGRGCGLQTCPNDCSGHGKCVYAEDVTFGTVYG----------DYAG-VPDANGNIVANGIGVGAAKVPQMPNWDSGKVRMCVCEPGYTDIDCSRRMCPQGNDVMDERNNLDQARKNQTQ 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18826.4689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18826.4689.1 >prot_H-paniculata_contig18826.4689.1 ID=prot_H-paniculata_contig18826.4689.1|Name=mRNA_H-paniculata_contig18826.4689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp MLPTAIGAVMLGVSLFLPSAEAGCCPNACSGHGTCTVDDACVCYSNWQNGback to top mRNA from alignment at H-paniculata_contig18826:237..2626- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18826.4689.1 ID=mRNA_H-paniculata_contig18826.4689.1|Name=mRNA_H-paniculata_contig18826.4689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2390bp|location=Sequence derived from alignment at H-paniculata_contig18826:237..2626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18826:237..2626- >mRNA_H-paniculata_contig18826.4689.1 ID=mRNA_H-paniculata_contig18826.4689.1|Name=mRNA_H-paniculata_contig18826.4689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig18826:237..2626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |