mRNA_H-paniculata_contig1882.4685.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1882.4685.1
Unique NamemRNA_H-paniculata_contig1882.4685.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1882.4685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1882contigH-paniculata_contig1882:9291..21384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-15_003010.1
Exons4
Model size3048
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1882.4685.1prot_H-paniculata_contig1882.4685.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1882 11269..13899 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929448.131271-UTR-H-paniculata_contig1882:9290..112681622929448.131271-UTR-H-paniculata_contig1882:9290..11268Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 9291..11268 -
1691480865.51727-UTR-H-paniculata_contig1882:9290..112681691480865.51727-UTR-H-paniculata_contig1882:9290..11268Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 9291..11268 -
1622929448.2021918-UTR-H-paniculata_contig1882:13899..139691622929448.2021918-UTR-H-paniculata_contig1882:13899..13969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 13900..13969 -
1691480865.5569532-UTR-H-paniculata_contig1882:13899..139691691480865.5569532-UTR-H-paniculata_contig1882:13899..13969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 13900..13969 -
1622929448.2183273-UTR-H-paniculata_contig1882:21083..213841622929448.2183273-UTR-H-paniculata_contig1882:21083..21384Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 21084..21384 -
1691480865.5659924-UTR-H-paniculata_contig1882:21083..213841691480865.5659924-UTR-H-paniculata_contig1882:21083..21384Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1882 21084..21384 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929448.1477616-CDS-H-paniculata_contig1882:11268..115681622929448.1477616-CDS-H-paniculata_contig1882:11268..11568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 11269..11568 -
1691480865.5278943-CDS-H-paniculata_contig1882:11268..115681691480865.5278943-CDS-H-paniculata_contig1882:11268..11568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 11269..11568 -
1622929448.1630375-CDS-H-paniculata_contig1882:12211..123671622929448.1630375-CDS-H-paniculata_contig1882:12211..12367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 12212..12367 -
1691480865.53769-CDS-H-paniculata_contig1882:12211..123671691480865.53769-CDS-H-paniculata_contig1882:12211..12367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 12212..12367 -
1622929448.1863708-CDS-H-paniculata_contig1882:13656..138991622929448.1863708-CDS-H-paniculata_contig1882:13656..13899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 13657..13899 -
1691480865.5478098-CDS-H-paniculata_contig1882:13656..138991691480865.5478098-CDS-H-paniculata_contig1882:13656..13899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1882 13657..13899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1882.4685.1

>prot_H-paniculata_contig1882.4685.1 ID=prot_H-paniculata_contig1882.4685.1|Name=mRNA_H-paniculata_contig1882.4685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MLGGIATIALTISSVVNGVAASQHLNQPTAAAATATAVNESAQRLRVGAE
RKLLLSTSECSVEFTTCSSDLDCVHCTSDSEVNTTECLDVYPHDPAGTTS
YFCHLIASTFCCALMYLSHVDAETCMTEGEPALDYWTCSLEDNGCSIEDM
PCYGEAASFYFAPTPSPVSAVAEEGNSEAMTGDDGNSFEKVEAEERTSTA
AGTIRAFDTSKAGLWVCGAASGLVAAVAAFAW*
back to top

mRNA from alignment at H-paniculata_contig1882:9291..21384-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1882.4685.1 ID=mRNA_H-paniculata_contig1882.4685.1|Name=mRNA_H-paniculata_contig1882.4685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12094bp|location=Sequence derived from alignment at H-paniculata_contig1882:9291..21384- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAATTCATGACACCAAGGGTTGTGTGCTTTGTGGAGAAACCTACTTGA GAACGGGGATGAACGGACAAGTACTTCCGCTGTATGGACAACCATCACTC GTTTTCAGCAGCGTCTTCGCACCACTTCTCTGCTAGCAGCACGGAGGGGC GTCGAGTTTCAAAATATCTATCTCCTCTCCTGCTAGGGGTCAGTCAGAGT GTGTACAACTGCTCAACCACAACAAACTGTTTTTCAGGATTTGCTGGTCG GAAGGATACCTTTTTCGCGGGCTCGTGGTGTTTCCAGCTATAGGGGTGGA GGTGAGAGATGTGTTGATCCGTCTCTACGATACATAGGAGTGCGGTTGAA GGATTACCAGCATGTGCTACCCATCTTTTCAGATATGGTGTAGGGAGGTT AAACGGAGTGACGATGTCCACAACTCCACGCAGAAACAAAACAGTCCAAC AGCAATGCTGTTCCCGTGTGACCATACTGAAATCAAAGAATACGCTCGAG ATGTCACATCCTGCGCCTGGCTCTCTACTTTATGGTCTCCACTGTGCGTG CATGAATGTTTGGCAAGAAAATACAACAGCAGCAATGGCGATACTCTTGT TGTTTAAAAGGCAGCGACAGTCAGTATGCCATCACTGCTGCAGAATGAAA GTCACGTTGTAGGCGTGCACGCGCTGAACTCCCTGCTCATGGGGGGGATT TTGAGTGTGCGAGGTCTACTGCGCACGATACAGTGTGCAACATATTTACT GCTTCGAGTTCAGTAACCTAGGACACCATCTGTGAATAGAAATAGCGAAT GGCGAGTTATATTCGATGCTGTGCTTCTTCAAGGGCTACCTCTCGCCCAC TTCATATATGATAAAACAGTGTAATATCTCCCAGCTGGGATTGCTGCTGC TCATGTGATAATGAGCTGCTGTGAGCATACATACGTGAAGATCTCCCGGT ACCCAAAGCCGTGCATTCTGTAAACTGTAGTTCAGACTGTATGCAGGAGA TCAACGATGCGATCAGAAACCTCTGCGGCACACTCGGACTGTATCTTATC TGGACACTTGAACTTTGAACCAGTTTGAAATCGTGGAATAAAACGATTTG AATCAGTTCCGCAGCTGTTCCATTTGGTCGAGTCTTTCTACGACGAAGGG TTGGAACTACATATTGCAAAAAGAACACATATGATGTATGTAGAGTTCTA GAGCTCCAGGAATAGAGCTCTAGGCTTGGTACTTGGGTCTGTCTTTTGAT GTGTCCGTCACACGGACGCTGTATAATAGCGAACGTGAATGTTTACGGCG GCAACAGCTAGAGGGTATCTTGCGCATATCCTGTGTAGTTGCTGCTGTGG GAGAGACCGATGTCATGAATCATTCAACGGCCGCGGGTGTTGCACAAGTG CTGATGTGTGTGGTAAGGCTGGATCATGTACAGTAAACCATCGTGTACTT CCTAAAACAGCGACAGCACGGAAAATCATACCAACTGGGAGCTCGACTTC TCTGTCCAGAATGCTCTTGGGCCGAGTCCGTTGACATGCCCAATAGTTTA GCACGTCCAGATATCAGCAATATAATACGAAACATCAAGGGCTAGCCTAA CCGTGTATCCAAGTGAAAAGATACGTAATTACACATCATACGCGGAGCGA CCTTGCAGATTGATGTGCTCGCGTGCCCGCACCACTCCCACCCTACCGAC TTTTGGTAAGGCCGTGGGGGGTACCCTCAATTAATATGGCGGGGTACCCC TGTTATACTATACTGAAACCAGATTATTTGTTCTCGTATTGGTATCAACC GTTTAGAGGAGGTGATGGGTTGCGTGTTTTGCAGTGGTGCGCAGACTTCT ACATGCTTCACCACAACGAGCAAGGGCAAAACAGAAGGGCACCCTCATGG CTGACCACGTCGAAATACTGTGTATACACCAGTACAAATCCCAAACATAC CGGGTATCTCCTATAAACATTCCAGTATTACTCAGTATAGTACCACCATT TTTTACTCTCGAAATACTGATGGTATATTGCAGAATTGCGGTCGAAACAT GTCTGTATGTTTTGCGCTTCATGCATAGTTTACTGTATTTATAACGCAGC CTAAACGTACCAGGACAGCGGATATGGAGCGTGCCAGAGTTTGGGGAAGA GCATGGTGAAGATTTGCAAATGTAAGACAGATAAATATCAACATGTCACT TCGCTGCATTTTTTGCTGTATCAAAAGGTGCTTATTTGCGCATGTGTGAC TCCACAGAGTGGGATTCATTCCTGTATGGTTGGTTGCAGATGAACGATAT TGTGAGGGAGAATTTTCTGACTTCACCTACCGTTGGCGCTGTAGATTCTC TCACAGTGGTATCCCAACAGATCCTCGGGTGCCATTGTATGACCGTCGGG TCTCGTACTATTACAGAGGGACATTGTTATTGGACCAAATTGTTGCTCTT TCGCACCATTTGCCTTGATTCAACTTGGTGTATCTCCACGATTACGAGCT CAAATGGAAAACCGAGAAGTGGGTGCACACCGCGTGATTGAGATGGTTTC ACAAGTATCCGTTCCGCATGTTGGGTTGGGTCGGTGGAATGATTTAAGAC TTTATCTCCCCGATGAAAACAGCTGCTGAGGTTGTTGTGCCTGAACATAC TGAACAATGAACCGTTTTTTGTTTTTTTTTTAGGTTTAGAAGACTTTCGC GCGGTATAACCGAATTCAGCTTGACGTATCTCCACAATCTGGGGGCTAAA TCGAAAACCGAAACGTAGGGGCATCCCGCATGATTGAGACGGTTCCACAC ACATCGGTTCCGCATGTTGGTTCAGTGGAACGAGATTAGACTTTGCTCCC CAATAGGTCAACATTTTGGTCCTATCAACAATGTGCCTCCGTAATAGTAC AACATCGTCAAGGCTTGCAGATGAACCTACTGACATGATTCTATGGGAAA ACTTCATCAGATTGCGAGAGATAGTGTTGTCTGCTATCCGACGAACGCCA CGACACGAGAACATCGAACGTGATTGTTTATTTCTACCTCATGCGACAAT CGGGCACAGATAGGTGAGGAGAAAGTCGGACTTGAAGCTGTGCCATAGCC CAGATTGCATTTGAAATGTCACTAGGATATCCACAAAGACAGGATTTTCT GAACAGGCCTTGCTCCCAATCGCTGTTTTCGATAACGATGGATAACTCAA TAGTAGGTTTTGTCCTATTCGTCAAAAACGATTCGACAGCTCTACAACTG TACCATCACTGTGCTTCGAAGGTACCTCGACGTAAAAAATCAAGGCTGGG CACAGTAAGGATTTCGATAACGGGGTGGAACGGTAACGGTAACGCAAACA CACTAATTAATGGCACGGTAAATGGTAATCATTTTTTCCACGGTAAAAAT TGGGTGGAGCGCCATCTCTACGGTAATTAACGGTACCGTAAATTTTCCGC TGTAAAATTTGGGTGGAGCGCTATCTTGACGATAATTACTGGAGTGGAAT AGGAAAAGCGCTTTTTCACGGCAACGAAACAGTACATCCTAGCCTGAACG GTATGAAACGGTAAATTGGTCGCCAGCACAGTTATACACTACTGAAAATC TGTTGGCGGCACGGGGAAGTTTGGGGCAACAGTTTTTGAGGCCAAGAGAT AGGAGCGGTGTCGTTGTGGCAGTCCACAAAAATGAGTAGCTGGATAAAAA AACGACCATGTTGACGCCTGATGGCAGTAGTACCTGGCGTATATTCGTCG TACATTGTTGACACTCAACGAGGTGTTCGCTTGTTTCCTATTTCTTGTGT CGATTCAAGATTAAATCTTCCAATCCTAGTTTGGTAAAGTCCACACCACT ACGGTGGTACTCAAAACCAGCTCATTTTTAGTTTCAACTGTTGTATTGAA TCCAATTCCACCGGGTACAAATGAAGATTTCATAAAGACGCGCAATATAT AACACATATTTCTCAACAACCACTTGATCGCCTTAACTAGATAATGGTCT AGAATTAAATAGTAACACATCGTCACAGTCGCGCCCGCATATTCTCAGGA GATATTAATCTCCACGCTGAACCAGGTGTACCGAATTTTACTCGACCATT CATACGCTGCTGAAAGATACTTCCCAAAAAATTTGAAGATTCACCCCGCC CCTGATGGCACTCCTGAGGAGGCCACTCAACAATCGTATCGGTTTCCAAG GGTACTCAGATTGCTACTTCCAAAGACTGGCCAGCTGAAGTCGTTTGGAA TTGTTCAACAGCCTCCTTCGCTTCAAGAGCCAACGCCTGCCGCTTGCGCA TGATCGCCTTGAGAGCCTGAACCTCAGGGATGCTCTTCTGGTTAAGCCGG AGGGACATCATCTTCTCGACTTTGGTAGCCGACATGCTCGCACGCAAGCT GCCGAGGCAGAGAAACAGAGAAGAGAGGTTCCTCTCCGCCTGGCAGCTTG TAGCACAAACCAAGTGGTAGAGGCGGACGACTAGCGCAAGATGCGGCGAT TTAGCTGACACAGTGGCGTCGTTCGTGCTTGTCGCTATTGTCGTAGAAGA TCTGCGGGCCCAGAAGTGGAGAAGAGAAGAGTCTTCTGTCTCCGCCGCAG GGCTCTCGGCGATGTAAGATGCCAGCTCTAATCTGAAGAGGTCGCCGTGC TTCACCTCCTCACGGCTTGCTCCACCGCCTCTACTAGCAGGCCCATCCCT AGTTACACCATGTAGACGATCCTGGGGTCACTGTTCCATCTTGCTCAGCT TGGCTTTCTTCGCGGCAAGAGGTCGTACGCTTCCGCTGCCGCTGCCACCG TCGCCGCTGTCGGCTAGGCCAGATTCTGGCAAAGTGAGCGGGGACTTTAC GGTGACTACGTGGGCTGCGATATCGTCCCTCGCTGCTGCCATGCACTCCG CCTTGACGTTTTCCCCCCACCTACGCACACTTGCTTTGAACAGAGTTTGT ATCGTGGGTCAAGAAGCGGGGTAACGCGCTCGATAGAACTGGACACCAAA CCAAGTTTCTTTGTCATTATCTCAGTAAGCACCTCCCTCGTCGTTTGTGC CTCACTTTGCAGTTCGTCCACCTCTATGGCATCCGTTATGGGGATACCAC GTACTCTTCTGTGCGAATGTCTTGCACGGGCTCGTTCAGCAGTGACAGCA GCTCTTGCATGAGGAACGTCGTATGGCTTAGGAAGCGGCCCGCCCCGCCC TGAATCGTAGTCGTCACTTCGGCCACAGGATCAAGCAAGCTGTAAACCTC TTCGGTGATCCACCACTCGTTGGTGCTCAGCTTCTGGGTGTTTGGGTGGG ATCTGAAGAACTCCACGATGGCATTTTTGAACTTCAGGAGCCGATCCATC ATATTTCTCGGGGACGTCCACCCGTGCAAGCGGGAAGGGAAACACAATAC ATTGCTGAGGCGAAGAGCAACAAAAGCTGAATGAGTGAGACTAGCATCCA TACTGTAGTCGCAATGCCTCATGCCACTGTAGTACAGTGTGGGCAGAATC AATCGAGCACATACTGTACACAAAATTGTTGCACTCATGTACTGTAAAAC GATACTGTAATGCTTCGACTTACTCTTACCGGTTGAAGGTACTGCTACAG GCAACCGACAGCAGGCAAGGATGCCCATTGAAAATGGTTCACGTTGCGAT ACAGCCTCTTTTCGCTTTTCCTTCCCTGCTGGTGTGGTGGCGGTGTTGAC TGATTGCTCTCCAGATAGCACGGTGCGCCTTCATCATGTGACCTGTCATG CACAATGTTCCATTCGCTGCGATCCACTTCGCTGTGTACTCGCACAGCTG AAGCTTGCCATACTTCCCTACCTCGACCGTGCACACTACGGTTTTGCCGC TCGACATGGGCGGAGAGAATTCCTTGAACACTTGGCAGCATGCTGCCGGC TTCGCGCGAATTCCCGCCAGAGGTTGGACTACTGTAACAGTTGCCTCTCT CTGCGTCAGCACGTCGGCTAACGATGGCACGGTTGTGTCGCGGTCAGGGG TTGTGCACCACACTACAGTCACTTCATCTGCCGCATCAGGCGCTCTGTCA TCACTCGTACTCATCCTCTTGTCTATGTGATGTGCGCCGATCGCGACCAT TCGTCTGTGCACGGTGCCTACTTGCTGTGAGTTGGAGCACAAGCACTCTC AACTCTCAACTCTTAAACCACACATAACCTAGAATTGTTTTTGGGGACAA CTGGAGATCCGAATATATTTTTTTAATGCGGTAACAGAGAGAAGTTGAAT TTGAATTTAGGTTCAACCTGGGCACAGGATTTTGAGTTTACAATTGTAGG TACCCTCCATGGCATGGAAATATGGTGCCAGCGTGGTAATTAATGGACGG TAAGCCGGCGGTACGGTAACAAATTGTAACTGTAAACGGTAAGCGAATTA TCAGAGTAACAGAAAGAGGGTAACCCGCCAGCACGATAGAAAATGGCAAT AACAAATGGTAACAGTAAACGCTAAGCAAATTATCACTGTAACAAATGGA CGTTGAGTCGCCAGCACGATAGCAAATGGTAATAACAAATGGTAACAGTA AACGGTAAGCAAATTATCACTGTAACAAATGGACGTTGAGTCGCCAGCAT GGTAGAAAATGGTAACGATAAATGGTAAGCAAATTATCACAGTAAATCCT ACGGTAATAACGGTAATCGTGCCCAGCCCTGTAAAAAGTCGGAATAGTAT CTCCGAGATCCCTCGTGCATAAACCCATGGAAACCACGTCATGTTCGGTA TCTACCCTGACGTACTCTCCAGGATCCAGAACCCACGACCACCCTCTCCG CCGGGCACTTGAGATACCTAAGGACCATGAAAACGTGCACGTGTTCCACG ATTGAGAAAATGCACAGACTAATTTTTATGCGCGTCCTCCTGGTAAACCG GCGGCAGGGCGCAACCGTGACCCGAACAATTAGGAATGCAGGCCTTGGTA ATCAACCTTTAGTGATTTATTTCGTTACAGGCAAGGGCAACTCATGAGAA TAAAAGAAAGAAAGAAAAAAAGAGAACAAGATGCTCGTATCTACATTTCC ATGACCTACTTCTTCCTTTTGGTTTGGGCCCAAATCGATCTTTTATTTGT ATTTTTAAACCTTTAATTTTATATAATGTTTTTAAAGAATTAAAGCCTTG CTTCAATTTTTTTTTTTTTAATTCTGAATTCTTTCGTCTACGGCTACGGC TACGTATATTTTCTCGTATAAAAGTAGCTAAACTTAAAGCGTTTGTTTTT GACTGAAATACTAAATTTATAAGTTGCATGCCTGATCTAGCATAACTAAA TTTCGTTTTGCTAACTACCGACGGATCGTTGGCGGAAACTCCAATATTTT TCCCGATGTCTGACACCCCTCCCTCCCTTCCGTCCTCCCTTCCCGTCCTC CTTGGCACTACCCAGGCGTATCTCCCCTGTTCTGTATGCGCAAAAAACAA AGCCCGTCCCGTCTACCGGAGCAGTCAGCGACAGCATGCTGGGCGGAATC GCGACGATCGCTCTCACGATCTCCTCTGTAGTGAACGGTGTAGCTGCGTC TCAGCACCTAAACCAACCGACGGCAGCCGCCGCCACCGCCACCGCCGTCA ACGAGTCGGCCCAGCGGCTGCGGGTCGGGGCGGAGCGAAAATTGCTGCTC TCGACCTCGGAATGCTCGGTCGAGTTTACGACTTGCAGTTCGGATTTAGA CTGCGTACACTGCACCTCGGATTCTGAGGTCAGGATCTTGAGGCCTGATC GTTGACGATATTTTTGGTTATCGGGTGTATTCGTTGTTTCTCAGGTATAA GGAGCCCAAGGGTTGGTAGTACATGGATTTTCGCTTGGGAGCGAGAGTGG AGGGATGGGGTGGGGTGAGGGTATATAGTTTGTGCTGTCGAGTCGCACTA TTCTGCGCGAATAACTGGGATCTACTCAACTTGGAAGTTCTCTACGTAAT TGATGTAAGACCTGGATAGTTTTTGGTGAGTTTGCCGGCCACTACGCAGT CAAATCCATCATGTTGGGATGGGTTGAGACATGATTCAAGACGCGAAGTT TTAAACTTAGCTTCACCATCCCCGTGTGCTGGCAAAAGCCATACACCGAT GTATGAAAAGAGAGCACCACATGCCTGGGCAATGAACGCGAGTTTATCGC GTTCAAAGGCTGTCCGCCTTGCCCGCACCCCACCCCACCCCCCGGTTGTA TGCCTCCCTAGCACTAAAAGTAAAAGGCTTCAAATGACAAGTTTCGTCGC GCGACGACGGGACCGTTCTCTCATTACTCTCAACATGGCCCTACGTTTAT ATATCTCTGTCTGGCGTATTGTGCTATTTTGGCGTCCAAACTCCGACTTT TGTTGTGCCTGGTGTGTTGATGGGACACGGAGTTTGTGCATGTTCCCTGG CGGCCGCGTACTGATTTACTACCACGCTCTTGTTTCTCAGGGTGCGTAAA AGATGCCAGCACCCCTGTAGTCTTACGAACATATCTTCTCTAGGGAGCTG GGCGTTGTTGGTTGAAGAATACGATGTACTTCTTATAGGAGGCGGCATCG TCTAACACATTCACTTGTGTGTCTATATTTTCGTTTTCGAAGCGAGTAAA GTGCCGGTGTGGTGCGTCAGTATTCAGCACCTTTGCTTCCGTTTGCTTTG TGTTTGGGCGCGGAGTGGGGGGTCAAACAAATCCGGAGAGGAGATTGAGG GTAGCATCCGTCATCCGGACTGGGCCAAAGCATATGGCCTGTTGTTGGCC CATTTAGTTGCGTGGGTTGGGCTCTGCTTGGTGCGCGTTGCGTTGCCTAT GTGCGCATCCGTGATAGATACGCTCATTGTCTGTGTAGTCTTCAAGCATT AGCTTTTCCCGTGTTTGTTGGCGAGGCTTGATCGGTCTTCGTGAAAACTG AACAAAACGAAGCAGACCTTCGTTCTGGACTGTGGAAATCTCGCGAACCT TATTTTTCTTTGTTGTGATTTTCCATTTGCTTGTGTCGCTTGCAACTGAC GACGCCGTTTCCTCCAGGTAAACACGACGGAGTGCCTGGATGTGTATCCT CACGACCCTGCTGGAACCACTTCATATTTCTGCCACTTGATCGCTTCAAC GTTTTGCTGTGCTCTCATGTACCTGAGTCACGTGGACGCGGAAACTTGTA TGACTGAAGGTGAACCTGCCCTGGTGAGGTTTTTATAGGGATATGATGTT ATGGTATGTACCCAGAGTTAACCTCCACCTCGTTACGGTCTTGCTATTTG CGGCTGAGGAAGTCGTGATATAAAAAATCAAGCTGTCTAGGGCATATGGA CCGCAAATAGACCGCTCGCGGTTATAGCGTTCAACCACGCTTTTACCTCG AGCTGGCAGTAGTCCTTGAGTGTGAGACCTTCTTCCCTACTGAAGCACAA CAGCAACTATCATTGTTCAAGACAAAAGGGCTTTTCAATTTTGTCGACTA CGAAGTTATTTACCGTATTCTTCAATACAGATGAACGCCGTTGGCGGTGA TTTCGGTTGGTCACGCTGAAACTAGGTCTTGTTCATCCTGTACTCTTCCC AAACAGAGGGAAGCTTTCCAGCGGGAATCCCAGCAAAGGAGTGAGACTGG TGCTCTGAAAGCAGGTCAATCCTAGTGCGCCTTTACGCGTCTACATATTT TGAATAAACAAAAATACTGTATTGCACAGTAGTACCCCCACCGTACGATA CATTCTGTGTCGTATGCGTGGCAGAACAAACATTTTCACATTAGACCAAA GCGCCCATGGGCTCCAATGAACAAAACTGCTCTGGACGCACCTTAATTTC TTCCTAAAATTTCCAGGATTACTGGACGTGCAGTCTGGAAGATAATGGGT GCTCGATCGAAGACATGCCCTGCTACGGCGAGGCCGCGTCGTTCTACTTT GCGCCGACGCCATCGCCTGTGAGTGCAGTCGCAGAAGAAGGGAACAGTGA AGCGATGACGGGCGATGACGGCAATTCCTTTGAAAAAGTCGAAGCCGAGG AAAGAACGAGTACTGCTGCCGGTACAATCAGAGCCTTTGATACCTCCAAG GCGGGGTTATGGGTATGCGGTGCTGCATCAGGGCTTGTCGCAGCTGTTGC CGCTTTCGCTTGGTAGCGTGTGCGTGCATATGTATTTTATGTGATCTATA TTATATGCCTGGTTTGCTCTTGCTCCGGAAGTTCACACGCGACGGTATTT AAAGTAATACTTGTCACCACATTTTAGATGTGTTAGTAGGTTTTGGTCCT AGAGTCGATATAACTGCTTTGTGCAAGTCGCACGAAGCAGCTGTGCTGAT TTGCGTGTTTGATTTTTATTTTATTGCTATTCTAGCGCCGTACGAGAGCT CTTGGAATCTCGGGACTTGTGTTGAGTAACAGCGGAGCGTTTCTGTGCGA TTTTCTCCGCGCTCTTGGCAAACTTCGTCATTCGAAAGGACGTCGTGTGG GGCGGTTCATGAATATTCGGTGTTGTGGCGACAAATATGTGAATGGAACG AGAATGGTGCTAGTAAGTGGTGCAATGTTGTAAACTCTTCTTAGGTTAGC ATGTCTGAGAATTCCTCTTATTTGGAGGTGAGCAATGTCAGTTTGCGACT GCATGTTAAACGTGTGACGATTATGATTTGTTTTTGTCGAGTATACCAGA ATTTTGAGTTGGTATTTTTGATGTGTCGTGTCCAGAGGGCCAGACGTGAA ACATGCTCTAGTATACGCCGGGACAGAGCGAGTGCACATGTATCTCTTCC GGCAGGGTTTGCGTTGTTTTCGGTCTTACAAAAATTCCGTTGCAGTTAAC TAAGTCGAATACCCATTCCGTTTCCTGTGTACATCGTTGATTTCAGTCCC ACCCTTTTAGTAGCGGTGACTTCACAGCAGTGACTAAGGATTGCCCGCCG CAGCCATGAATTTCTCATGGCTGCGATTTTCTTTATGCTTTCATATTTAC ATTCCTGAGACACGGTGGTTGGAGGTCGCTCTCAATGCGGTAGATATTGC AGGATATATGGCACGTATTCCAATCCCGTGTCCATGCAACGAGTACGTTC AGACTTTTGGACGTCAAACGATTTATGGGGCTGTGGAGTTATAGCCAGGG TAAGGTGAAAGTGTTTGTGCGGGATATGTAGCGCGTCGTCGACAGAGACG GCTTGTTTGTTTGGTCTACGTTTCTCAGGTAGGTTATGGTTTGGGCTTGC TTGTGTTTTGCTTGTGTGGGGTACTGTCTTTTTTGTTGCTGCTTTTCTTA TCGTGGATAAAAAATGGGGAAAGGGTGCGCTGTTTTTTTTTGCTGTAGAC TAACCATTATTCCCCCCCCCCAAGGATTACAGTGCAGTGAGTATGTTATT GATAAATTAAGTTGTTGGTCAAGGGGAACTTCTGAAGGAAGTACGGCGGT GTGGCCACCAGTTTAGACTGCTGTAGCTAGCGAGGCGAGAATGAAGTATC GGAAACAGCCGATTTTTGATCGATGGCTTGTTGTTATTATAGCAAGAGTC GCAAAATAACGTTTTGCGGATGCGTGATATTCGTGCAATGCGTCTCTAGC CTTTTGTTTTCGTATCTCTGTGTGTACATATACTGGATAAGCGCAACATG TTAAGTTTACTTGGCAACCACCCATTCCCTCCCTCTAGCCAAAGATTACT GATGCAGGTTAATTGGCAATGATTATGATATGTCATGTATGATGAACCGA ATGGTGTTGATTTGTTCTGGTCAAATGCATATAAATTAACATGCAAAGTG CACTACAATCTTTCTTGGCTGTGTGTACTACTGTAGTGCTGTACCAATAA TGTCGCGCAGAGATACCCCAAACGGGAGCACGGACGTGGTTGATCACGTC GAAGAGTAGAGAGAGGGTTCGTGCATCATTTGGTTATAACGTGCTTTTGG TACAAGGGGGGCTAGTGGTTGGGGGTGCGCTGGACAGGATCTCGGGGTGC CATGTTACAGATATAGTACTATTTGGTTTGGGTTGTTTGCTTACGACCTT GTTTTCGTTCTGTACGGGAAAGATTTTTTGTCATGAATAGAGAGTGACAT ACGCCACAGTAATCAAAGAGACCGGCCGAGCGCTTCGCGAATGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1882:9291..21384-

>mRNA_H-paniculata_contig1882.4685.1 ID=mRNA_H-paniculata_contig1882.4685.1|Name=mRNA_H-paniculata_contig1882.4685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig1882:9291..21384- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGGCGGAATCGCGACGATCGCTCTCACGATCTCCTCTGTAGTGAA
CGGTGTAGCTGCGTCTCAGCACCTAAACCAACCGACGGCAGCCGCCGCCA
CCGCCACCGCCGTCAACGAGTCGGCCCAGCGGCTGCGGGTCGGGGCGGAG
CGAAAATTGCTGCTCTCGACCTCGGAATGCTCGGTCGAGTTTACGACTTG
CAGTTCGGATTTAGACTGCGTACACTGCACCTCGGATTCTGAGATGCTGG
GCGGAATCGCGACGATCGCTCTCACGATCTCCTCTGTAGTGAACGGTGTA
GCTGCGTCTCAGCACCTAAACCAACCGACGGCAGCCGCCGCCACCGCCAC
CGCCGTCAACGAGTCGGCCCAGCGGCTGCGGGTCGGGGCGGAGCGAAAAT
TGCTGCTCTCGACCTCGGAATGCTCGGTCGAGTTTACGACTTGCAGTTCG
GATTTAGACTGCGTACACTGCACCTCGGATTCTGAGGTAAACACGACGGA
GTGCCTGGATGTGTATCCTCACGACCCTGCTGGAACCACTTCATATTTCT
GCCACTTGATCGCTTCAACGTTTTGCTGTGCTCTCATGTACCTGAGTCAC
GTGGACGCGGAAACTTGTATGACTGAAGGTGAACCTGCCCTGGTAAACAC
GACGGAGTGCCTGGATGTGTATCCTCACGACCCTGCTGGAACCACTTCAT
ATTTCTGCCACTTGATCGCTTCAACGTTTTGCTGTGCTCTCATGTACCTG
AGTCACGTGGACGCGGAAACTTGTATGACTGAAGGTGAACCTGCCCTGGA
TTACTGGACGTGCAGTCTGGAAGATAATGGGTGCTCGATCGAAGACATGC
CCTGCTACGGCGAGGCCGCGTCGTTCTACTTTGCGCCGACGCCATCGCCT
GTGAGTGCAGTCGCAGAAGAAGGGAACAGTGAAGCGATGACGGGCGATGA
CGGCAATTCCTTTGAAAAAGTCGAAGCCGAGGAAAGAACGAGTACTGCTG
CCGGTACAATCAGAGCCTTTGATACCTCCAAGGCGGGGTTATGGGTATGC
GGTGCTGCATCAGGGCTTGTCGCAGCTGTTGCCGCTTTCGCTTGGTAGGA
TTACTGGACGTGCAGTCTGGAAGATAATGGGTGCTCGATCGAAGACATGC
CCTGCTACGGCGAGGCCGCGTCGTTCTACTTTGCGCCGACGCCATCGCCT
GTGAGTGCAGTCGCAGAAGAAGGGAACAGTGAAGCGATGACGGGCGATGA
CGGCAATTCCTTTGAAAAAGTCGAAGCCGAGGAAAGAACGAGTACTGCTG
CCGGTACAATCAGAGCCTTTGATACCTCCAAGGCGGGGTTATGGGTATGC
GGTGCTGCATCAGGGCTTGTCGCAGCTGTTGCCGCTTTCGCTTGGTAG
back to top