mRNA_H-paniculata_contig18749.4651.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 158 bits (399), Expect = 4.120e-41 Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 2
Query: 497 AMPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
++PNGQVPVL++DG+ L QS+AILRYVG+L GL P+DDL AAKCDAIMDC +L +RP+ EKDE KK+ MR L+ + P WL +M K L + GT+F K+++ADI I L M+ LD + + +P+L A+ V EPK+AAF+AKHAK
Sbjct: 46 SLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFD-KMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE) HSP 1 Score: 142 bits (358), Expect = 2.340e-35 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 2
Query: 497 AMPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKKLDHMD-PELL--TPHPTLAALVKTVTEEPKIAAFIAKHAK 973
++PNGQ+PVL VDGY LPQS+ ILRYVG+L GL+P+DDL+AAKCDA++D V+ VRP EKD+ K++ M L+ + P WL ++ K L A G YF K+S+ADI I L ++ ++ P + + +P L AL ++ EPKIAAFIAKH K
Sbjct: 46 SLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAE-KMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 133 bits (334), Expect = 4.740e-32 Identity = 67/156 (42.95%), Postives = 106/156 (67.95%), Query Frame = 2
Query: 497 AMPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFI 958
++P Q+P L V G ++PQSLA +RY+G++ GLY D ++AA DA M+ +++ +RPT+ E+D KK+ MRK ++++ P WLG++ + L+AAGG+YF GGKLSI DI +VA L +K+ LD + ++ P L+ALV++V E KI ++
Sbjct: 46 SLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYL 201
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 130 bits (328), Expect = 3.260e-31 Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = 2
Query: 500 MPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
+P Q+PVL VDG ++PQSLAILRYVG++ LYPTD + AA D+ D ++ +R +FEKD +KK +RK L E P WL ++ K L+ AGG YF G KLSI DIA+VA L + + + LL P +++LV+ V EP+I A++ + K
Sbjct: 46 LPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPK 205
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO) HSP 1 Score: 129 bits (324), Expect = 1.120e-30 Identity = 69/160 (43.12%), Postives = 102/160 (63.75%), Query Frame = 2
Query: 503 PNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGT-YFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
P G VP LT+ + QS AILRY G+L GLYPTD ++A D I+D ++ V+PT+ E+DE+KK+ MRK L+E+T P WLG+ +KH+E G + Y G L+IAD+ + ++G++ LD + + P P + AL++ V + K+ AF AKHAK
Sbjct: 46 PYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFEAKHAK 205
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 122 bits (307), Expect = 2.490e-28 Identity = 73/178 (41.01%), Postives = 101/178 (56.74%), Query Frame = 2
Query: 461 WSDVSLAF----LLVVAMPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK--LDHMDPE-LLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
W D + F L +P Q+PVL VDG ++PQ+ AILRYVG++ LYPTD + AA D+ D ++ +R FEKD + K + K L E P WL ++ K L+ AGG YF G KLSI DIA+VA L + D P +L P L++LV+ V EP+I A++ + K
Sbjct: 29 WIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPK 206
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.890e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2
Query: 518 PVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
PVL VDG ++PQS+AILRYVG++ LYP D + AA D+ +D ++ +R +FEKD + K +RK L E P WL + K L+ AGG YF G KLSI DIA+VA L + + + LL P L++LV+ + EP+I A++ K
Sbjct: 2 PVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPK 155
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI) HSP 1 Score: 117 bits (292), Expect = 5.390e-26 Identity = 53/121 (43.80%), Postives = 86/121 (71.07%), Query Frame = 2
Query: 500 MPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGTYFCGGKLSIADIAIVAMLGVMKK 862
+P Q+P+LTVD + PQS AILRY G++ GLYP+D + AAK DA++DC ++ A +RP+++E + ++K++MRK LSE T P WL ++ + LE AG T+F G +++I D+ I + +++
Sbjct: 46 LPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRR 166
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: A0A2E7BV08_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E7BV08_9DELT) HSP 1 Score: 114 bits (286), Expect = 1.940e-25 Identity = 61/158 (38.61%), Postives = 99/158 (62.66%), Query Frame = 2
Query: 500 MPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGT-YFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAK 964
+P GQ+PVL VD + QS+AI RY G+++GLYP+D L AA+CD ++D +++ + P+M KD E+K +R++L++ P WLG + LEA G +F G L++AD+ I +LG ++ LD + +LL P P L +TV + P + A++ +
Sbjct: 50 LPYGQLPVLDVDDVRIAQSVAIARYCGKVSGLYPSDALQAARCDELLDTATQITQDLGPSMRSKDPEEKARLRQNLAQKIFPRWLGMLEARLEANGDNGFFVGESLTMADLIIWRLLGWLRGGILDGIPTDLLDPFPGLLGHQETVGQHPGVVAWMTR 207
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Match: A0A382FZV4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382FZV4_9ZZZZ) HSP 1 Score: 111 bits (278), Expect = 9.500e-25 Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = 2
Query: 503 PNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTD-DLDAAKCDAIMDCGVELSAKVRPTMFEKDEEKKVAMRKHLSEDTAPAWLGHMSKHLEAAGGT-YFCGGKLSIADIAIVAMLGVMKK--LDHMDPELLTPHPTLAALVKTVTEEPKIAAFIAKHAK 973
P GQ PVL VDG + Q+ AI R+ G+L+GLYPT+ D AAK D ++D +++ K+RP + EKD EK++ MR+ LSE P WLG M LE G T YF L++AD+A + G + +D + +L+ P L A ++ PK+A ++ K+ K
Sbjct: 17 PFGQFPVLQVDGKTIAQTGAIARFCGKLSGLYPTENDFYAAKVDEVIDLATDITVKIRPALIEKDPEKRMEMRRELSETVLPHWLGFMETLLENNGKTGYFVDDSLTVADLAAWRLCGWISGGIIDGIPETILSAFPLLNAHQNHISNLPKVAEWLEKNRK 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18749.4651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18749.4651.1 >prot_H-paniculata_contig18749.4651.1 ID=prot_H-paniculata_contig18749.4651.1|Name=mRNA_H-paniculata_contig18749.4651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp MPNGQVPVLTVDGYMLPQSLAILRYVGRLTGLYPTDDLDAAKCDAIMDCGback to top mRNA from alignment at H-paniculata_contig18749:532..4316+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18749.4651.1 ID=mRNA_H-paniculata_contig18749.4651.1|Name=mRNA_H-paniculata_contig18749.4651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3785bp|location=Sequence derived from alignment at H-paniculata_contig18749:532..4316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18749:532..4316+ >mRNA_H-paniculata_contig18749.4651.1 ID=mRNA_H-paniculata_contig18749.4651.1|Name=mRNA_H-paniculata_contig18749.4651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig18749:532..4316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |