prot_H-paniculata_contig18646.4613.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18646.4613.1
Unique Nameprot_H-paniculata_contig18646.4613.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0K273_9PHAE (Ribosomal protein S19 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K273_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.800e-47
Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEKNK 88
            MPRSKWKTPFIDKSLFKRL+FE ENQPTWSRRSTIYPA+VGL+LPI+NGKEMVTRKIT QMVGHKLGEFV TRKSF +K + GG+K K
Sbjct:    1 MPRSKWKTPFIDKSLFKRLDFECENQPTWSRRSTIYPAIVGLQLPIYNGKEMVTRKITSQMVGHKLGEFVPTRKSFIQKKRGGGKKKK 88          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q94Z05_PYLLI (Ribosomal protein S19 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z05_PYLLI)

HSP 1 Score: 132 bits (332), Expect = 1.470e-38
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEK 86
            M RS WKTPFIDKSL KRL  ++E +PTWSRRSTIYPA VGL+LPIHNGK MVTRKI  +MVGHKLGEFVTTRK+F  K+K+G +K
Sbjct:    1 MSRSNWKTPFIDKSLLKRLKPDHEKKPTWSRRSTIYPAAVGLKLPIHNGKNMVTRKIKSEMVGHKLGEFVTTRKTFKPKIKKGLKK 86          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A1I9LWB1_9PHAE (Ribosomal protein S19 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LWB1_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.450e-36
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 82
            MPRS WKTPFIDKSL KRL   +E +PTWSRRSTIYPA +GL+L I+NGK+M+TRKI P+MVGHKLGEFVTTRK+F  K K+
Sbjct:    1 MPRSNWKTPFIDKSLLKRLTPGHEKKPTWSRRSTIYPAAIGLKLNIYNGKDMITRKIKPEMVGHKLGEFVTTRKTFIPKKKK 82          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q8LWZ8_9PHAE (Ribosomal protein S19 n=50 Tax=Phaeophyceae TaxID=2870 RepID=Q8LWZ8_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.940e-36
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFY-KKLKRGGEKNK 88
            M RS WKTPFIDKSL KRL  E+E +PTWSRRSTIYPA VGL+L I+NGK+M++RKI P+MVGHKLGEFVTTRK+F  KK+K+   K K
Sbjct:    1 MSRSNWKTPFIDKSLLKRLTPEHEKKPTWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRKNFIAKKIKKTTTKKK 89          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q2TUF6_9PHAE (Ribosomal protein S19 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUF6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 4.050e-36
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 82
            M RS WKTPFIDKSL KRLN E++ +PTWSRRSTIYPA+VGL+L IHNG++MV RKI P+MVGHKLGEFV TRK+F  K K+
Sbjct:    1 MSRSNWKTPFIDKSLLKRLNPEHDKKPTWSRRSTIYPAVVGLKLRIHNGRDMVDRKIKPEMVGHKLGEFVPTRKTFVPKKKK 82          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A3G5FPQ0_9PHAE (Ribosomal protein S19 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPQ0_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.490e-36
Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 82
            M RS WKTPFIDKSL KRL+ +YE +PTWSRRSTIYPA VGL+L I+NGKEMV RKI P+MVGHKLGEFV TRK+F  K K+
Sbjct:    1 MSRSNWKTPFIDKSLLKRLDPKYEKKPTWSRRSTIYPAAVGLKLQIYNGKEMVYRKIKPEMVGHKLGEFVATRKTFIPKKKK 82          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A4D6E522_9PHAE (Ribosomal protein S19 n=4 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E522_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.270e-35
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 82
            M RS WKTPFIDKSL KRL  ++E +P WSRRSTIYPA VGL+L I+NGK+M+TRKI P+MVGHKLGEFVTTRK+F  K K+
Sbjct:    1 MSRSNWKTPFIDKSLLKRLTPQHEKKPIWSRRSTIYPAAVGLKLQIYNGKDMITRKIKPEMVGHKLGEFVTTRKNFIAKKKK 82          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0FDL3_9PHAE (Ribosomal protein S19 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDL3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.430e-35
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEKNK 88
            M RS WKTPF+DKS  KRL  ++E +PTWSRRSTIYPA VGL+L IHNGKEM++RKI P+MVGHKLGEFV TRK+F  K K+   K K
Sbjct:    1 MARSNWKTPFVDKSFLKRLTPQHERKPTWSRRSTIYPAAVGLKLLIHNGKEMISRKIKPEMVGHKLGEFVPTRKTFIPKKKKTMVKKK 88          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: E6ZER8_ECTSI (Ribosomal protein S19 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER8_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 6.520e-35
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLK 81
            M RS WKTPFIDKSL KRL  E E +PTWSRRSTIYPA VGL++ IHNGK+M+ RKI P+MVGHKLGEFV TRK F  K K
Sbjct:    1 MSRSSWKTPFIDKSLLKRLTRELEKKPTWSRRSTIYPAAVGLKIHIHNGKDMIARKIKPEMVGHKLGEFVATRKPFIPKKK 81          
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0FCH2_9PHAE (Ribosomal protein S19 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FCH2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.440e-34
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 82
            M RS WKTPFIDKSL KRL+  +E +PTWSRRSTIYPA VGL+L I+NGKEM++RKI P+MVGHKLGEFV TRK+F  K K+
Sbjct:    1 MSRSSWKTPFIDKSLLKRLHPMHEKKPTWSRRSTIYPAAVGLKLHIYNGKEMISRKIKPEMVGHKLGEFVMTRKTFIPKKKK 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0K273_9PHAE8.800e-4784.09Ribosomal protein S19 n=1 Tax=Protohalopteris sp. ... [more]
Q94Z05_PYLLI1.470e-3874.42Ribosomal protein S19 n=1 Tax=Pylaiella littoralis... [more]
A0A1I9LWB1_9PHAE1.450e-3673.17Ribosomal protein S19 n=1 Tax=Pleurocladia lacustr... [more]
Q8LWZ8_9PHAE2.940e-3670.79Ribosomal protein S19 n=50 Tax=Phaeophyceae TaxID=... [more]
Q2TUF6_9PHAE4.050e-3673.17Ribosomal protein S19 n=2 Tax=Desmarestia TaxID=31... [more]
A0A3G5FPQ0_9PHAE7.490e-3674.39Ribosomal protein S19 n=1 Tax=Cladosiphon okamuran... [more]
A0A4D6E522_9PHAE2.270e-3571.95Ribosomal protein S19 n=4 Tax=Laminariaceae TaxID=... [more]
A0A8F0FDL3_9PHAE3.430e-3568.18Ribosomal protein S19 n=1 Tax=Analipus japonicus T... [more]
E6ZER8_ECTSI6.520e-3572.84Ribosomal protein S19 n=2 Tax=Ectocarpus siliculos... [more]
A0A8F0FCH2_9PHAE1.440e-3471.95Ribosomal protein S19 n=1 Tax=Chorda asiatica TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 28..47
score: 46.53
coord: 60..75
score: 63.41
coord: 48..60
score: 39.33
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..88
e-value: 7.3E-27
score: 91.3
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 3..76
e-value: 4.8E-22
score: 77.6
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 1..84
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 1..88
score: 19.159
IPR023575Ribosomal protein S19, superfamilyGENE3D3.30.860.10coord: 1..87
e-value: 9.0E-25
score: 88.2
IPR023575Ribosomal protein S19, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 3..76
NoneNo IPR availablePANTHERPTHR11880:SF837S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 1..84
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 48..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18646contigH-paniculata_contig18646:955..1221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18646.4613.1mRNA_H-paniculata_contig18646.4613.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18646 955..1221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18646.4613.1 ID=prot_H-paniculata_contig18646.4613.1|Name=mRNA_H-paniculata_contig18646.4613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGK
EMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEKNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR023575Ribosomal_S19_SF
IPR020934Ribosomal_S19_CS