prot_H-paniculata_contig18616.4602.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18616.4602.1
Unique Nameprot_H-paniculata_contig18616.4602.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
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BLAST of mRNA_H-paniculata_contig18616.4602.1 vs. uniprot
Match: A0A6H5K1V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V3_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.430e-15
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0 
Query:    3 QILVGSLLLDWATLSSIPANPQQCGQCGRFDSDRFPSALLVAWRLPSQNPPRPLSLSRSGTANPAVGAFNPMTTYFTALRRVSSPPRDITNPGNV 97
            + L GSL L W  L ++PA+P++CG      S+R+PSA L   R+     PRPLS+S  G +NPAV  FNPM T+FTA+R++ +  R     G V
Sbjct:  245 RALWGSLTLTWDNLMAVPASPRKCGVFSGLQSERYPSAFLAVRRV-CPPLPRPLSMSPRGVSNPAVEKFNPMVTFFTAIRQLVNGVRGGVGAGGV 338
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BLAST of mRNA_H-paniculata_contig18616.4602.1 vs. uniprot
Match: D7FU46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU46_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.120e-14
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0 
Query:    3 QILVGSLLLDWATLSSIPANPQQCGQCGRFDSDRFPSALLVAWRLPSQNPPRPLSLSRSGTANPAVGAFNPMTTYFTALRRVS 85
            + L GSL L W  L ++P  P++CG      S+R+P+A L   R+    P RPLS+S  G +NPAV  FNPM T+FTA+RRV+
Sbjct:  242 RALWGSLTLSWDNLMAVPTGPRKCGVFSGLQSERYPTAFLAVRRVYPPLP-RPLSMSPRGVSNPAVEKFNPMVTFFTAIRRVT 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18616.4602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1V3_9PHAE5.430e-1544.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU46_ECTSI1.120e-1446.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..137
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18616contigH-paniculata_contig18616:1466..4831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18616.4602.1mRNA_H-paniculata_contig18616.4602.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18616 1466..4831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18616.4602.1 ID=prot_H-paniculata_contig18616.4602.1|Name=mRNA_H-paniculata_contig18616.4602.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
MCQILVGSLLLDWATLSSIPANPQQCGQCGRFDSDRFPSALLVAWRLPSQ
NPPRPLSLSRSGTANPAVGAFNPMTTYFTALRRVSSPPRDITNPGNVLKN
DDDDYTSGSNNNSKNGLILRGWDGGGSGEVVGGRVAG
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