mRNA_H-paniculata_contig1861.4600.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: D7FQU6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU6_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 4.830e-195 Identity = 577/1535 (37.59%), Postives = 731/1535 (47.62%), Query Frame = 2
Query: 65 RTSTEPLRSELLAMQLAECANEMVDDLRVQVLQPMERVLASRGDIQIAIRERTRAADTLAAAHKDVARAVARYEPATPRIANGDQGKLPAAEMMLLADRVAEASGSFAEAHGRAEEVLSGILEERGRCLREAMASLKAAQTVFFVRAGHCVSSSVGQTPPPEMADNANDLVTEDNSGDDKMGGAVSMIPLPKSAELVDFRHVKKQTSVVSNPTATTKVDSIDKAATLNPAGPLSHDVRNLTSVKIATDVPVLDSVEEAPGVGASAAPRAPLSSLIGGFAAAPTEEQAAPVEGGAEPPRPSCSAEGSDTGDGKAGETGGSTRNFGAFGSPKAGTNKVAGSGIKNGGLNGSGVTLSDAKRKRTSGWLRRISMSFKTGQSKSRSSSDDWEGSLTPLSRSAGAVGEEIGEMLSGNMAAVAATWPPPDSLVHDFAIACVGGRDAPATAFDGDVRSKTQEERGVDVMLSAVDGGDQTSEGDAEVEGGSEVNAIEAGATEGSVGDDGDEVRRNIYVSLFADFAARSHSEDEDGEREQDDVFVDSAEAQRLALAETLKTGASHAGQGMLARDLPVANAGERSEESDSDETGSNSTEGFGPETAGTLFDGSGGRESVLFPRSPIIFGTSGSAWGGDVAR-----PEGTENGDGDGDDGGCSCGDGGDAKMVGGMATLTDVPEAIEGEEGEGGDIVEEREELLGSTESLKQQGMG--------AAEEKQTPFPVAESERDDPLPMTVA----KVDTVR--------LAHYGDE--EETTIDPPSTPPNVSMRPRPHI------ERPPALASVLPCTPDNSTTMESPISRTA-EAMVTPNGGQTSLATPKDMSPTVSEESSTRGTPRSPRSWRLSGWWARASDRHRPPPPGGDENDFPGVGNSLAASLAXXXXXXXXXXXXXXXXXXXXXXXXXSGGDGRPAVADDVIEGLGEKGASSTVGTLLEEQAXXXXXXAVAEEK--RAWSQSRRRRLATSWLSADRLVDHSARPFEAAREFLDVTELSRVCGVCRGWAERLGGEGGGREWRRCVRLAGGVPESWRARFYLHVLYDQPSWLPKGHERRRITSPRQDLYRKCLLEAETEDEARRTAAAAAESWDEEREGVDRADSQ---------RRREGLLQAPGDDYGRAFSPPPVAKCYKWLEEIDTDVLRTCPAD-------AKTISNEIRTPTTGTAAHDGPNTGGIVDSG--PGIKGKAVAGTEWLVTDASPPSWMTVL-------GRKKEDQEREEGRGIGKAPSDAGGPVAEESAEDSTGMIMWSG-------SPTGGGTRDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQLFGLRRDGTGRHVVGATFEEAAQGSLCESIRAGQIVDHALRLYATEETLERYLTDYRGQEVELEPGSD 4465
R S E +R++LLA+QL ECANEM + LRVQV++P+ RVL R D+Q +RER AD LA AH D A++V+RY+ + +G P E+++L DRV AS +FAEAHGRAEEVL+ L ERGRCLREA +SLKAAQ FFVRA CVSSSV P ++ + + T + N T +T D+ A + A P +V ++TD A EGG E + G GS F + + V G K G +G + +KR+R SGW +R++ SF+T + RS+S++ L R + E SG D C+ R P +S + + GG+ +G++ + RN + A AA + S D D A D ETGSN+TEGFG + AG L+DG R +++ P F + + + PE NGD +GG SCG G G EE EG +++ +G E+ K++G A++ T P AE++ +V +VD R + GD E + S+P V R P++ PP++ VLP +E P+ A E TP+ A SP +S+ SS + SPR+WRLS WWA+ASDRH P XXXXXXXXXXXXXXX PAV D GEK AS + L+ A A +E + R W+Q RR + WLS D+L D R EAA E+LDV L++ VCR W E L GE G + W RCVRLA GVPE+ RA FYLH+LYDQP W+ K H + PR +Y++CL +AE D+ AA + EE E RA R GL G G +P P +C+KWLEEI+TDVLRTCP D + + T AA DG G I D+G P + V + + S S TV G ED +GR AP E E G SG S TGGG RDKLRRVLRAFAV+NRRVSYCQGMNFVALALL+AC GDDE AFWIL+GMC+ LEL GLWCQGLERLD CFF+L+RLL HCPSLRQHL+DEGV+L+MFTSRWFVTLF DVFGRGTSRKILDMFLVE WP++FK+SLGVLLEMRPLLEPADMEGILK+TKFPRA LFGLRRDG+GRH+ GA+FEEA QGSLCESIRAGQ+V+HAL L+ + ETLE++ +YR Q+ PGSD
Sbjct: 143 RASGESMRAKLLALQLTECANEMEEHLRVQVVKPVARVLEGRNDVQAVLRERLLIADRLAEAHSDYAKSVSRYQSSIFDNVSGG----PPPEVVVLGDRVVGASDAFAEAHGRAEEVLTKRLAERGRCLREAASSLKAAQAGFFVRASRCVSSSVVWESPDDV--------------------------------------LSRATGDLQNTTRSTAEDTRKPPAASHVAKP--------KAVVVSTD---------------------------------------AAFEGGKEE---------------RDGGAAGSQAKSAVFSTGIHDRDTVKGKWKKGGDYDG--LRNDSSKRRRNSGWFKRLASSFQTNRP--RSASEE----LLEEERMPSPFNDNADEYDSGG---------------DDDKKLCL--RSIPRATASSSAKSPKGK---------LLFGGEDFWDGNSSL--------------------------RNGNTAELATEAAATSSPDAGS-----DASATGAVXXXXXXXXXXXXXXXXXXXXXXXXDTDY-------------ETGSNTTEGFGSDDAGDLWDGR--RSTLMAPLDRTSFMPNDNGHKSEEEEEWHVPPEXESNGDEP--EGGDSCGKGAAGSPSG-------------AEEEEGVELMPGAHPEVGVAETSKEEGGASRSGIISPASDVDGTVPPAAENDGAPESARSVKGGRDRVDEERDGGRGGGLVKDSGDSVAEGAKAEDISSP--VPTRRSPYLVHCSPSRAPPSILPVLPEPGPKEDGVEDPLPPVAIEQRRTPSPLCKITA-----SPAISDGSSCK---ESPRAWRLS-WWAKASDRHPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAGGAFAPSRNAGDAPAVMDG-----GEKKAS--LEEALKSAATETVADAASERRSRRRWTQRRREK---PWLSKDKLADPQTRALEAASEYLDVVALAKAVVVCRAWREPLAGEEGRQRWMRCVRLADGVPENRRAMFYLHILYDQPCWVQKAHGSKSSERPRPGVYQECLEKAEA-DQEETVAAKEMQRILEEEERNGRASPSAGARAAALFRDSGGLRAVAGGCDGDGDTPAPPPRCHKWLEEIETDVLRTCPGDDAAGEDAVNEFDSVLSKNTAAAAASDG---GEIGDTGTPPANESSRVRFSVSFSSFGSSNSSSTVKAVANRSSGAVAEDL-GSDGRRSSTAPVQGRDSAPTEGEEVVAGGRGGSGAIVRNKFSATGGGMRDKLRRVLRAFAVYNRRVSYCQGMNFVALALLEACEGDDENAFWILAGMCENLELGGLWCQGLERLDLCFFSLERLLRRHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTDVFGRGTSRKILDMFLVEGWPLLFKMSLGVLLEMRPLLEPADMEGILKVTKFPRAHLFGLRRDGSGRHIAGASFEEATQGSLCESIRAGQMVEHALLLHISGETLEQHQREYRLQK-HAAPGSD 1451
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A836C7P9_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7P9_9STRA) HSP 1 Score: 213 bits (543), Expect = 8.900e-52 Identity = 144/435 (33.10%), Postives = 191/435 (43.91%), Query Frame = 2
Query: 2972 FLDVTELSRVCGVCRGWAERLGGEGGGREWRRCVRLAGGVPESWRARFYLHVLYDQPSWLPKGHERRRITSPRQDLYRKCLLEAETEDEARRTAAAAAESWDEEREGVDRADSQRRREGLLQAPGDDYGRAFSPPPVAKCYKWLEEIDTDVLRTCPA-DAKTISNEIRTPTTGTAAHDGPNTGGIVDSGPGIKGKAVAGTEWLVTDASPPSWMTVLGRKKEDQEREEGRGIGKAPSDAGGPVAEESAEDSTGMIMWSGSPTGGGTRDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQLFGL 4273
++D +L RV VC W E L +RR +R P RA YLH+L+D+P+WL +G R A A AE+ + + I+ D+ RT PA A NE G G G D G ++EE A+ + SP R +LRR+LRAFA+H RRVSYCQGMNFVALALL+A D+E+AFW L + +RL +EG+WC GL RL+F FAL+RLL+ H P L H+ GV + MF SRWFVTLF C+D FG + ++LD+F+VERWP + +V++ VL + P L P D+EGIL PRA LFG+
Sbjct: 810 YMDAADLCRVQSVCSRWRELLACAAAAPLFRRVLRGPRAAPPRKRAALYLHILHDRPAWLGRGGGRXXXXXXXXXXXXXXXPALSGRGAAGAYARLCAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARAEQRLAASFRVIEADLERTWPAVSASYKCNEYA-----------------------------------------------------------GGGDGDDGYDDAGALSEEDADGEA--VAGVASPRSVELRGRLRRMLRAFALHARRVSYCQGMNFVALALLEASGEDEEEAFWALVALSERLAMEGVWCPGLHRLEFALFALERLLKQHVPELAAHMEASGVSVGMFASRWFVTLFQCHDTFGCSAAARVLDLFVVERWPALLRVAVAVLAALAPRLLPLDLEGILSAMHRPRAALFGV 1183
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A7S3XYH7_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYH7_HETAK) HSP 1 Score: 162 bits (411), Expect = 1.280e-38 Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 2
Query: 3770 KLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQL 4264
KL+RVL AFA++++RV+YCQGMNFVA LL+AC G++E AFW+L G+ + + +W GL RL+FCFFAL RLL P+L H E V + MF +RWFVTLFA G ++ D FLVE+W ++F+ +L +L L D EGIL + + P A L
Sbjct: 230 KLQRVLCAFAMYHQRVAYCQGMNFVAARLLEACGGEEEPAFWVLVGVAQQFAMGEVWSPGLRRLNFCFFALGRLLRDRAPALHAHFQAEEVAVGMFAARWFVTLFAGGRALGPRAQLRLWDAFLVEKWAVVFQTALALLQHFEARLLTLDFEGILHLLRTPLAHL 394
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A4D9CZ65_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ65_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.130e-28 Identity = 139/478 (29.08%), Postives = 199/478 (41.63%), Query Frame = 2
Query: 2960 AAREFLDVTELSRVCGVCRGWAERLGGEGGGRE-WRRCVRLAGGVPESWRARFYLHVLYDQPS--WLPKGHERRRITSPRQDLYRKCLLEAETEDEARRTAAAAAESWDEEREGVDRADSQRRREGLLQAPGDDYGRAFSPP--PVAKCYKWLEEIDTDVLRTCPADAKTISNEIRTPTTGTAAHDGPN-----------TGGIVDSGPGIKGKAVAGTEWLVTDAS-----------PPSWMTVLGRKKEDQEREEGRGIGKAPSDAGGP-VAEESAEDSTGMIMWSGSPTGGGT-----RDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQLFGL---RRDG 4285
A FLDV L+ V + W L + G E WR+ VR GGVPE RARF+ ++LY PS W P RR T+ + +A A + +D D E A G GR S P PV Y+ L + +R + + A N + G+ G G +G +AGT PP M + Q R I + D V E + + S +P+ G R +L RVL+A+A+++ R+ YCQGMN LL D+E AFW+L G+ + + +W +G+ RL CF DRLL P L H + GV + MF+S+WFVTL+A D ++ D+FLVE W +IF V++ ++ + L D+E IL++ + PRA L R DG
Sbjct: 691 AGIRFLDVVGLAEASCVSKEWERLLRRDARGHEAWRQAVR-GGGVPEGVRARFWHYLLYS-PSIPWRPYFPLRRG-----------------TDSNGKSKSAPDAWAGSSPVHTLDLKD-----EATTGAHG---GRTLSGPHRPVPGLYQSLVARAQEQIRQYQEAGRMAGSGSPEGVLDEAGGGSANERRDEQKPQQASSGLSREGKGDEGGEMAGTGRCGGGGGARGLEPREPHHPPPRMPLARADTYGQYRS--NWINEIAVDVQRTYVVEPDGDARESLCPRSPTPSEGPCTPERQRPRLSRVLQAYAMYHPRLKYCQGMNTCVALLLMVTKNDEEAAFWLLVGLAEECGMREVWMEGMPRLKACFAVFDRLLRIRTPGLHAHFVETGVHVAMFSSKWFVTLYANLDTLPPQAVLRVWDVFLVEGWSVIFGVAVSLIEMLEGQLRDLDLEDILRLVQDPRAALLACSTTRADG 1139
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A2D4BZI8_PYTIN (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZI8_PYTIN) HSP 1 Score: 121 bits (303), Expect = 7.070e-27 Identity = 67/195 (34.36%), Postives = 106/195 (54.36%), Query Frame = 2
Query: 3764 RDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQLFGL---RRDGTGRHVVGATFEEAAQGSL 4339
+D++RRVLRA+ ++N RV YCQGMNF+ L++ D+ FW+ G+ + L+ GL L F + P L H EGV + F +RWF+T F+ + FG ++LD+F+++ W +IF ++L VL E+ L +DME IL++ + PRA+L L RR +H + + A S+
Sbjct: 22 QDRIRRVLRAYVMYNPRVGYCQGMNFLVRLLMEVT-DDEADCFWLFVGLSEPELDRNLYEPGLTVLQPLFVRFEAFFSRQKPELFAHFQREGVPVAAFAARWFLTFFSTFETFGPTLVIRLLDLFVIDGWRVIFSMALVVLDELEHELLASDMEAILRLLQLPRARLVELTPQRRRELLQHALAFSITRAMGSSM 215
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: M4B4F2_HYAAE (Rab-GAP TBC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F2_HYAAE) HSP 1 Score: 118 bits (296), Expect = 1.300e-25 Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 2
Query: 3770 KLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRA 4258
K+RRVLRA+AV+N RV YCQGM F+ + LL D+ FW+ G + + L+ G+ L + L H P L H EGV + F +RWF+T F+ + ++LD+F+++ W I+F VSL +L E++ L DMEGIL+I +FPR+
Sbjct: 60 KMRRVLRAYAVYNPRVGYCQGMGFL-VRLLAEVADDEADIFWLFVGFSEPENNQNLYEPGMIVLQPYLSKFELLFSTHMPKLYSHFMAEGVHVATFCTRWFLTFFSSFETLAPTLVIRLLDIFIIDGWRIMFSVSLVILDELQQQLLKHDMEGILRILQFPRS 221
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A2D4C8C0_PYTIN (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8C0_PYTIN) HSP 1 Score: 120 bits (302), Expect = 5.400e-25 Identity = 66/182 (36.26%), Postives = 102/182 (56.04%), Query Frame = 2
Query: 3764 RDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQLFGLRRDGTGRHVVGA 4309
+D++RRVLRA+ ++N RV YCQGMNF+ L++ D+ FW+ G+ + L+ GL L F + P L H EGV + F +RWF+T F+ + FG ++LD+F+++ W +IF ++L VL E+ L +DME IL++ + PRA+L RR+ VGA
Sbjct: 224 QDRIRRVLRAYVMYNPRVGYCQGMNFLVRLLMEVT-DDEADCFWLFVGLSEPELDRNLYEPGLTVLQPLFVRFEAFFSRQKPELFAHFQREGVPVAAFAARWFLTFFSTFETFGPTLVIRLLDLFVIDGWRVIFSMALVVLDELEHELLASDMEAILRLLQLPRARLHQ-RRESEKECEVGA 403
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A0W8DLX5_PHYNI (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DLX5_PHYNI) HSP 1 Score: 119 bits (299), Expect = 6.970e-24 Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 2
Query: 3770 KLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQL---FGLRRDGTGRHVVGATFEEA 4324
KLRRVLRA+ V+N RV YCQGM F+ + LL D+ FW+ G + L+ G+ L + L H P L H +EGV + F +RWF+T F+ + ++LD+F+++ W I+F VSL +L E++ L +DMEGIL++ +FPR + +R+ RH + + A
Sbjct: 342 KLRRVLRAYVVYNPRVGYCQGMGFL-VRLLAEVAEDEADIFWLFVGFSEPENDRNLYEPGMAVLQPYLSKFEVLFSTHMPELYTHFQNEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKSDMEGILRVLQFPRCYMPEPDQIRQRQLARHALAFSISRA 528
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: A0A329SFX5_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SFX5_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.160e-23 Identity = 94/313 (30.03%), Postives = 139/313 (44.41%), Query Frame = 2
Query: 3398 WLEEIDTDVLRTCPADAKTISNEIRTPTTGTAAHDGPNTGGIVDSGPGIKGKAVAGTEWLVTDASPPSWMTVLGRKKEDQEREEGRGIGKAPSDAGGPVAEESAEDSTGMIMWSGSPT-GGGTRDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQL---FGLRRDGTGRHVVGATFEEA 4324
W EID DV+RTC I TTG A++ T + + + + D S ++L + ER EG EDS +G+ T KLRRVLRA+ V+N RV YCQGM F+ + LL D+ FW+ G + L+ G+ L + L H P L H EGV + F +RWF+T F+ + ++LD+F+++ W I+F VSL +L E++ L +DMEGIL++ +FPR + LR+ RH + + A
Sbjct: 605 WFREIDVDVVRTC-------HRSIYARTTGIASNTTSET-------------STSDADNAIND----SVASILNEMVDTIERREGE------------------EDSVSNNYATGTKTLDPDLEAKLRRVLRAYVVYNPRVGYCQGMGFL-VRLLAEVAEDEADIFWLFVGFSEPENDRNLYEPGMAVLQPYLSKFEVLFSTHMPELYTHFQTEGVHVATFCTRWFLTFFSSFETLTPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKSDMEGILRVLQFPRCYMPEPDQLRQRQLVRHALAFSISRA 874
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Match: V9F9L7_PHYPR (Rab-GAP TBC domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=V9F9L7_PHYPR) HSP 1 Score: 120 bits (302), Expect = 1.520e-23 Identity = 90/312 (28.85%), Postives = 134/312 (42.95%), Query Frame = 2
Query: 3398 WLEEIDTDVLRTCPADAKTISNEIRTPTTGTAAHDGPNTGGIVDSGPGIKGKAVAGTEWLVTDASPPSWMTVLGRKKEDQEREEGRGIGKAPSDAGGPVAEESAEDSTGMIMWSGSPTGGGTRDKLRRVLRAFAVHNRRVSYCQGMNFVALALLDACCGDDEQAFWILSGMCDRLELEGLWCQGLERLDFCFFALDRLLEHHCPSLRQHLADEGVQLNMFTSRWFVTLFACNDVFGRGTSRKILDMFLVERWPIIFKVSLGVLLEMRPLLEPADMEGILKITKFPRAQL---FGLRRDGTGRHVVGATFEEA 4324
W EID DV+RTC + T T+ VD+G G S +VL + R EG G + S+ + E KLRRVLRA+ V+N RV YCQGM F+ + LL D+ FW+ G + L+ G+ L + L H P L H +EGV + F +RWF+T F+ + ++LD+F+++ W I+F VSL +L E++ L +DMEGIL++ +FPR + +R+ RH + + A
Sbjct: 604 WFREIDVDVVRTCHRSIHARKTRVVAKATTTSD---------VDNGIG------------------DSVASVLNEMVDTIVRTEGEGNSASTSEPSTTAVDPELEA------------------KLRRVLRAYVVYNPRVGYCQGMGFL-VRLLAEVAEDEADIFWLFVGFSEPENDRNLYEPGMAVLQPYLSKFEVLFSTHMPELYTHFQNEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKSDMEGILRVLQFPRCYMPEPDQIRQRQLARHALAFSISRA 869 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1861.4600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1861.4600.1 >prot_H-paniculata_contig1861.4600.1 ID=prot_H-paniculata_contig1861.4600.1|Name=mRNA_H-paniculata_contig1861.4600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1455bp MQLAECANEMVDDLRVQVLQPMERVLASRGDIQIAIRERTRAADTLAAAHback to top mRNA from alignment at H-paniculata_contig1861:6045..20637+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1861.4600.1 ID=mRNA_H-paniculata_contig1861.4600.1|Name=mRNA_H-paniculata_contig1861.4600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14593bp|location=Sequence derived from alignment at H-paniculata_contig1861:6045..20637+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1861:6045..20637+ >mRNA_H-paniculata_contig1861.4600.1 ID=mRNA_H-paniculata_contig1861.4600.1|Name=mRNA_H-paniculata_contig1861.4600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8730bp|location=Sequence derived from alignment at H-paniculata_contig1861:6045..20637+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |