mRNA_H-paniculata_contig18587.4590.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI) HSP 1 Score: 247 bits (631), Expect = 2.330e-78 Identity = 125/148 (84.46%), Postives = 139/148 (93.92%), Query Frame = 1
Query: 1 VVRNAPATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSS-FDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
VVRNA ATVELCGALKNVVALGAAFCDGLG+GGNTKAAIVRTGLAEM++FA+R+R D+S FDATASSRAFLESCGIGDLMTTCYG SRNRKCAE+FARE+GKRSW+QLE EELGGMKLQGPSTA+E F IK++KCA +FPLLTTI+R
Sbjct: 249 VVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASAFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 396
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE) HSP 1 Score: 246 bits (629), Expect = 2.920e-78 Identity = 125/148 (84.46%), Postives = 139/148 (93.92%), Query Frame = 1
Query: 1 VVRNAPATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYD-SSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
VVR+A ATVELCGALKNVVALGAAFCDGLG+GGNTKAAIVRTGLAEM++FA+R+R D SSFDATASSRAFLESCGIGDLMTTCYG SRNRKCAE+FARE+GKRSW+QLE EELGGMKLQGPSTA+E F IK++KCA +FPLLTTI+R
Sbjct: 255 VVRDASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASSFDATASSRAFLESCGIGDLMTTCYGASRNRKCAEMFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 402
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A7S1MNI2_ALECA (Glycerol-3-phosphate dehydrogenase (NAD(+)) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MNI2_ALECA) HSP 1 Score: 149 bits (377), Expect = 2.370e-43 Identity = 79/141 (56.03%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 19 ATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
A VELCGALKNVVALGA FCDGL +GGNTKAA++R GL EM F F FLESCG+ DL+TTC+G RNRKCAE F R G +SWQ++E E LGG KLQG TA E++ +K R PL TTI++
Sbjct: 16 AGVELCGALKNVVALGAGFCDGLDYGGNTKAAVIRIGLEEMTAFIRH------FHPGVKDNTFLESCGVADLITTCFGG-RNRKCAEAFVRGKGAKSWQEIEGELLGGQKLQGTLTAQEIWPVMKEHGLCERLPLFTTIYQ 149
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A813FZ22_POLGL (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FZ22_POLGL) HSP 1 Score: 149 bits (377), Expect = 3.990e-41 Identity = 78/138 (56.52%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 25 VELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIF 438
VELCGALKNVVALGA FCDGL +GGNTKAA++R GL EM++F Y + D+T FLESCG+ DL+TTC+G RNRKCAE F R G +SW Q+E + LGG KLQG TA E++ +K + PL TTI+
Sbjct: 201 VELCGALKNVVALGAGFCDGLDYGGNTKAALIRIGLQEMKIFIRHF-YPDAKDST-----FLESCGVADLITTCFGG-RNRKCAEAFVRSRGSKSWDQIEKDLLGGQKLQGTLTAQEIWPVMKAHGLCQKLPLFTTIY 331
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A024UGT0_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UGT0_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.630e-41 Identity = 81/142 (57.04%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 16 PATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
P VELCGALKNVVALGA FCDGLG+GGNTKAAI+R GL EM+ F R FD F ESCG+ DL+TTC+G RNRKCAELF ++ G +W+++E L G KLQG TA EV+ I+R H FPL T I+R
Sbjct: 209 PHGVELCGALKNVVALGAGFCDGLGYGGNTKAAIIRLGLIEMKKFCYRF-----FDGIKED-TFFESCGVADLITTCFGG-RNRKCAELFVKDKGV-TWEEMEATVLNGQKLQGTGTAKEVYHIIERTNALHEFPLFTAIYR 342
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A485K707_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K707_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.840e-41 Identity = 82/142 (57.75%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 16 PATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
P VELCGALKNVVA+GA FCDGLG+GGNTKAAI+R GL EM+ F R FD F ESCG+ DL+TTC+G RNRKCAELF ++ G +W+ LE L G KLQG TA EV+ IK H FPL TTI+R
Sbjct: 204 PHGVELCGALKNVVAIGAGFCDGLGYGGNTKAAIIRLGLIEMKKFCYRF-----FDGIKED-TFFESCGVADLITTCFGG-RNRKCAELFVKDKGV-TWETLEQTVLNGQKLQGTLTAKEVYHIIKDTNALHEFPLFTTIYR 337
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: W7U0Y7_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Y7_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.480e-41 Identity = 79/142 (55.63%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 16 PATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
P VELCGALKNVVAL A FCDGL +GGNTKAAI+R GL EMRLF ++ + S D T F ESCG+ DL+TTCYG RNRKCAE FAR G +W ++E EELGG LQGP T ++ ++++K RFPL ++++
Sbjct: 253 PIGVELCGALKNVVALAAGFCDGLDWGGNTKAAIIRRGLEEMRLFC-KLLHPSVRDMT-----FFESCGVADLITTCYGG-RNRKCAETFARAGGTMAWDEIEKEELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQ 387
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A8J5XD68_DIALT (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XD68_DIALT) HSP 1 Score: 147 bits (371), Expect = 4.390e-40 Identity = 81/139 (58.27%), Postives = 96/139 (69.06%), Query Frame = 1
Query: 19 ATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTI 435
A VELCGALKNVVALGA FCDGLG GGNTKAAI+R GL E F +M Y D T FLESCG+ DL+TTC+G RNRKCAE FA+ GK W ++E E L G KLQG TA +V ++++ AH+FPLL+ I
Sbjct: 235 AGVELCGALKNVVALGAGFCDGLGLGGNTKAAIIRVGLGETIQFC-KMFYGGIKDQT-----FLESCGVADLVTTCFGG-RNRKCAEAFAKAGGKSGWDKIEKEMLNGQKLQGTITAQDVAKVLRKKGVAHKFPLLSKI 366
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A6G0WBF1_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBF1_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.090e-40 Identity = 82/142 (57.75%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 16 PATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
P VELCGALKNVVALGA FCDGLG+GGNTKAAI+R GL EM+ F R FD F ESCG+ DL+TTC+G RNRKCAELF ++ G SW+ LE L G KLQG TA EVF I+ FPL T I+R
Sbjct: 199 PHGVELCGALKNVVALGAGFCDGLGYGGNTKAAIIRLGLIEMKKFCYRF-----FDGIKED-TFFESCGVADLITTCFGG-RNRKCAELFVKDKGV-SWETLEATVLNGQKLQGTLTAKEVFHIIQNTNAVQEFPLFTAIYR 332
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Match: A0A812V3M5_9DINO (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V3M5_9DINO) HSP 1 Score: 145 bits (367), Expect = 1.210e-39 Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 25 VELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFAERMRYDSSFDATASSRAFLESCGIGDLMTTCYGNSRNRKCAELFAREAGKRSWQQLEDEELGGMKLQGPSTALEVFDGIKRRKCAHRFPLLTTIFR 441
VELCGALKNVVALGA FCDGL +GGNTKAA++R GL EM+ F R Y D+T FLESCG+ DL+TTC+G RNRKCAE F + G +SW +E E LGG KLQG TA E++ +++ + P+LTTI++
Sbjct: 201 VELCGALKNVVALGAGFCDGLEYGGNTKAALIRIGLQEMKTFI-RYFYPEVKDST-----FLESCGVADLITTCFGG-RNRKCAEAFVKAKGTKSWDMIEKELLGGQKLQGTLTAQEIWPVMQKHNLCDKLPMLTTIYQ 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18587.4590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18587.4590.1 >prot_H-paniculata_contig18587.4590.1 ID=prot_H-paniculata_contig18587.4590.1|Name=mRNA_H-paniculata_contig18587.4590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp VVRNAPATVELCGALKNVVALGAAFCDGLGFGGNTKAAIVRTGLAEMRLFback to top mRNA from alignment at H-paniculata_contig18587:316..4409- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18587.4590.1 ID=mRNA_H-paniculata_contig18587.4590.1|Name=mRNA_H-paniculata_contig18587.4590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4094bp|location=Sequence derived from alignment at H-paniculata_contig18587:316..4409- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18587:316..4409- >mRNA_H-paniculata_contig18587.4590.1 ID=mRNA_H-paniculata_contig18587.4590.1|Name=mRNA_H-paniculata_contig18587.4590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig18587:316..4409- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |