prot_H-paniculata_contig1849.4554.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1849.4554.1
Unique Nameprot_H-paniculata_contig1849.4554.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig1849.4554.1 vs. uniprot
Match: D8LS14_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS14_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 2.670e-49
Identity = 84/137 (61.31%), Postives = 99/137 (72.26%), Query Frame = 0
Query:   46 PVWMPALREERSSSASGISIAAVAGDDDREAEELWTDGKG-KAWVDDGRDSLPFEVYDVVPPKRKIGTAKLPPMTSTGDTMWHGSKHYRVLRVSSHYKYEGGRFVMRKKVIDAKELARVAREQVVARLVYGDDVKPP 181
            P W  ++R+   SS     ++A +GDD          G G K WVDDGRDSLPF VYD  PP RK+G A LPP+T TGDT+WHGSKHY+VLRVSSHYKYEGGRFV+R+K I AKEL RVA+E+VV+RLVYGD  K P
Sbjct:   35 PAWASSVRQG-DSSGDRAWMSASSGDDSSSGSGSGLSGSGGKEWVDDGRDSLPFVVYDAAPPPRKVGVANLPPLTGTGDTLWHGSKHYKVLRVSSHYKYEGGRFVVRRKSIQAKELKRVAKERVVSRLVYGDSGKAP 170          
BLAST of mRNA_H-paniculata_contig1849.4554.1 vs. uniprot
Match: A0A7R9UDE4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDE4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.790e-10
Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 0
Query:   47 VWMPALREERSSSASGISIAAVAGDD-DREAEELWTDG------KGKAW-----VDDGRDSLPFEVYDVVPPKRKIGTAKLPPMTSTGDTMWHGSKHYRVLRVSSHYKYEGGRFVMRKKVIDAKELARVAREQVVARL 172
            +  P +R  R      + + A+AG+  D E E+  +D       KG+ W       D RD LPF+V+D+ PP + +G+ +L P T+ GD + +  + + V RV+ +YKY  G   M KK     EL R  +E+ + RL
Sbjct:   26 IVSPVVRVTR----PALGLRAMAGEGWDGENEDDLSDEMEVQKKKGRGWKAPKKAKDRRDQLPFDVFDITPPTKMLGSFRLHPHTNCGDLLTYNDESFLVRRVACNYKYSRGALRMFKKTAHVVELNRAFQERSLERL 159          
BLAST of mRNA_H-paniculata_contig1849.4554.1 vs. uniprot
Match: R1DMF1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMF1_EMIHU)

HSP 1 Score: 53.1 bits (126), Expect = 1.830e-5
Identity = 30/68 (44.12%), Postives = 39/68 (57.35%), Query Frame = 0
Query:   83 GKGKAWVDDGRDSLPFEVYDVVPPKRKIGTAKLPPMTSTGDTMWHGSKHYRVLRVSSHYKYEGGRFVM 150
            G  K  VDD RD LP+E+ DV PP+R++GT +L P    GD +      + V RVS  Y Y  GR+ M
Sbjct:   63 GYVKRPVDD-RDRLPYELTDVTPPERRLGTYRLAPNLGCGDMVETSEDAFVVKRVSYRYAYRAGRYRM 129          
BLAST of mRNA_H-paniculata_contig1849.4554.1 vs. uniprot
Match: A0A7S0DYI3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYI3_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 2.740e-5
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   91 DGRDSLPFEVYDVVPPKRKIGTAKLPPMTSTGDTMWHGSKHYRVLRVSSHYKYEGGRFVM 150
            D RD LP+E+ D+ PP+RK+GT +L P    GD +      + V R+S  Y Y  GR+ M
Sbjct:  100 DNRDRLPYELTDITPPERKVGTFQLAPNLGCGDMVDTPEDTFVVKRISYRYTYSAGRYRM 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1849.4554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LS14_ECTSI2.670e-4961.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9UDE4_9STRA1.790e-1032.61Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
R1DMF1_EMIHU1.830e-544.12Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0DYI3_9EUKA2.740e-541.67Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.781

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1849contigH-paniculata_contig1849:6467..11182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1849.4554.1mRNA_H-paniculata_contig1849.4554.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1849 6438..12133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1849.4554.1 ID=prot_H-paniculata_contig1849.4554.1|Name=mRNA_H-paniculata_contig1849.4554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MAPHPCLLLLLAFPPCLVGAWSAGTSATRSELLRNCQKRGKRHSNPVWMP
ALREERSSSASGISIAAVAGDDDREAEELWTDGKGKAWVDDGRDSLPFEV
YDVVPPKRKIGTAKLPPMTSTGDTMWHGSKHYRVLRVSSHYKYEGGRFVM
RKKVIDAKELARVAREQVVARLVYGDDVKPPRENPPR*
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