prot_H-paniculata_contig18460.4545.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18460.4545.1
Unique Nameprot_H-paniculata_contig18460.4545.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
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BLAST of mRNA_H-paniculata_contig18460.4545.1 vs. uniprot
Match: A0A6H5KCR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR7_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.930e-6
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    5 KEEHPGRADAKTVRELSMWLSLFFEGRKDTKEACQETCVSVLSELAAVAREHADDCVKAEL 65
            ++E    A  + V+E+ MWLSLFF  R+ TK ACQ +C  VLS+L   A +  D  ++A+L
Sbjct:  400 RDERAVHAAIRIVKEVCMWLSLFFAAREGTKAACQASCYGVLSDLKRAAEDQKDQQLRAQL 460
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18460.4545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KCR7_9PHAE1.930e-642.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18460contigH-paniculata_contig18460:1738..3140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18460.4545.1mRNA_H-paniculata_contig18460.4545.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18460 1345..4061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18460.4545.1 ID=prot_H-paniculata_contig18460.4545.1|Name=mRNA_H-paniculata_contig18460.4545.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MMTSKEEHPGRADAKTVRELSMWLSLFFEGRKDTKEACQETCVSVLSELA
AVAREHADDCVKAELGQCLAWVIPEANNERADVLEGDGQGEGARGAGASK
KDL*
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