mRNA_H-paniculata_contig1840.4512.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: D7FR60_ECTSI (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR60_ECTSI) HSP 1 Score: 332 bits (850), Expect = 6.310e-102 Identity = 183/295 (62.03%), Postives = 209/295 (70.85%), Query Frame = 2
Query: 1895 GGRYLA*ESATSVVGRKDSRFFTGAGSPKKIL-----QVEWFFRDGDRIDTNTGD-GKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKIAAK 2761
GG + + T+++ K G ++ +V+W DG +I+T++ D GKVVVAKV+GSCR+ILQGERTALNVISRCSGVA++T AV QA+ GWKG+VAGTRKTTPG FRLVEKY LVVGGGATHRYDLSQMVMLKDNHI SAGGI AV A+R AGFSMKIEVE SNY QA EAA AGAD++MLDNFEP ELKSVSRRLK E+PH +LEASGGITA+TFHLFL DSVDVISQGALTHGY CLDFSLKI A+
Sbjct: 31 GGYVVGSKEETAILYGKTDGVLAGRPFFDRVFTLLGCKVDWLMSDGAQINTSSSDTGKVVVAKVTGSCRHILQGERTALNVISRCSGVATATFEAVQQAKAKGWKGYVAGTRKTTPG---------------------------------FRLVEKYALVVGGGATHRYDLSQMVMLKDNHIASAGGITRAVEVARRAAGFSMKIEVETSNYGQAAEAARAGADIIMLDNFEPEELKSVSRRLKGEFPHVILEASGGITAETFHLFLEDSVDVISQGALTHGYNCLDFSLKIVAQ 292
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: A0A836CJK9_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJK9_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.360e-82 Identity = 159/291 (54.64%), Postives = 189/291 (64.95%), Query Frame = 2
Query: 1895 GGRYLA*ESATSVVGRKDSRFFTGAGSPKKIL-----QVEWFFRDGDRIDTNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
GG + + T+ + K S GA +++ +VEW +DGDRID ++G KVV+A+V GSCR++L GERTALN++SRCSGVA++ A + RE GW G VAGTRKTTPG FRLVEKYGLVVGG ATHR DLSQMVMLKDNHI SAG I AV AKR AGFS+K+EVEA YE A EAA AGADVVMLDNFEP LK + RLK E+P+ L+EASGGITA T F+ VDVIS+G+LT GY CLDFSLK+
Sbjct: 40 GGFVVGDKMETAALYGKSSGVLAGAPFFTEVMRLVGCEVEWAAKDGDRIDASSG--KVVIARVKGSCRHLLIGERTALNILSRCSGVATAADDAARRGREVGWHGMVAGTRKTTPG---------------------------------FRLVEKYGLVVGGAATHRNDLSQMVMLKDNHIMSAGSITKAVALAKRAAGFSIKVEVEAGTYEAAHEAATAGADVVMLDNFEPAALKKAAARLKKEFPNVLIEASGGITADTMTQFMSPDVDVISRGSLTQGYACLDFSLKV 295
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: A0A2D4BMS8_PYTIN (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS8_PYTIN) HSP 1 Score: 268 bits (684), Expect = 3.290e-78 Identity = 149/287 (51.92%), Postives = 179/287 (62.37%), Query Frame = 2
Query: 1895 GGRYLA*ESATSVVGRKDSRFFTGAGSPKKILQVEWFFRDGDRID-TNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
GG + T+ + K FT +VEW ++GD +D + T +GKVVVAKV+G CRNIL GERTALN+++R SG+A+ +VD AR GW GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNH+ +AG I NAV AKR GFSMKIEVE E+ EAA AGAD+VMLDNF P ELK + LK ++PH L+EASGGIT T ++ VDV+SQG LT GYPCLDFSLKI
Sbjct: 33 GGFVVGETQETAFLLGKSKEVFTAVD-----CKVEWLLKEGDVVDPSTTAEGKVVVAKVTGKCRNILLGERTALNILTRASGIATLAKHSVDIARGLGWHGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITNAVHKAKRATGFSMKIEVECRKLEEGIEAAKAGADIVMLDNFTPEELKKTAATLKSQFPHLLIEASGGITPDTLAQYVSPHVDVVSQGKLTQGYPCLDFSLKI 281
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: A0A662Y2C2_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2C2_9STRA) HSP 1 Score: 268 bits (684), Expect = 4.120e-78 Identity = 144/254 (56.69%), Postives = 175/254 (68.90%), Query Frame = 2
Query: 1994 VEWFFRDGDRID-TNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
V+W R+GD + + GKVVVA+V+G CRNIL GERTALN+++R SGVA+ +AV AR GW GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNHI +AG I +AV+ AKR AGFSMKIEVE E+A EAA AGAD+VMLDNFEP +LK+ + +LK ++PH L+EASGGIT++T L+L VD++SQG LT GYPCLDFSLKI
Sbjct: 68 VDWRLREGDAVSPASAPGGKVVVAQVTGKCRNILLGERTALNILTRASGVATQAQQAVALARGLGWSGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHIWAAGSITSAVQTAKRAAGFSMKIEVECRRLEEAVEAAQAGADIVMLDNFEPEQLKATAAKLKTQFPHLLIEASGGITSETMGLYLSPHVDIVSQGKLTQGYPCLDFSLKI 288
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: H3G8T1_PHYRM (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Phytophthora TaxID=4783 RepID=H3G8T1_PHYRM) HSP 1 Score: 266 bits (679), Expect = 2.220e-77 Identity = 139/254 (54.72%), Postives = 173/254 (68.11%), Query Frame = 2
Query: 1994 VEWFFRDGDRI-DTNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
VEW ++G+ + + GKV VA+V+G CR +L GERTALN+++R SGVA+ R+V+QAR GW+GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNH+ +AG I NAV AK+ AGFSMKIEVE E+A+EAA AGAD+VMLDNFEP +LK+ + LK ++PH L+EASGGIT +T ++ VDV+SQG LT GYPCLDFSLKI
Sbjct: 70 VEWLLKEGEEVAPSRVSGGKVPVARVTGKCRQLLLGERTALNILTRASGVATQARRSVEQARALGWRGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITNAVHKAKQAAGFSMKIEVECRRIEEAQEAATAGADIVMLDNFEPEQLKATAAELKKQFPHVLIEASGGITPETLGQYVSPDVDVVSQGKLTQGYPCLDFSLKI 290
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: A0A3R7JF79_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JF79_9STRA) HSP 1 Score: 262 bits (670), Expect = 2.080e-76 Identity = 144/292 (49.32%), Postives = 184/292 (63.01%), Query Frame = 2
Query: 1895 GGRYLA*ESATSVVGRKDSRFFTGAGSPKKILQ-----VEWFFRDGDRIDTNTG-DGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
GG + T+++ K + G ++ + VEW ++GD + + +GKV VA+V+G CR +L GERTALNV++R SG+A+ R+VD+AR GW GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNH+ +AG I AV AK+ AGFSMKIEVE E+A+EAA AGAD+VMLDNFEP LKS + LK ++PH L+EASGGIT +T ++ VD++SQG LT GYPCLDFSLKI
Sbjct: 11 GGFVVGESPETALLLGKSAGILAGVPFFTQVFESLGCNVEWLMQEGDEVKIDEAPNGKVPVARVTGKCRQLLLGERTALNVLTRASGIATQARRSVDEARALGWNGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITKAVHKAKQAAGFSMKIEVECRRLEEAQEAATAGADIVMLDNFEPELLKSTAAELKAQFPHLLIEASGGITPETLGQYVSPHVDIVSQGKLTQGYPCLDFSLKI 269
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: D0P1T9_PHYIT (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=19 Tax=Peronosporaceae TaxID=4777 RepID=D0P1T9_PHYIT) HSP 1 Score: 261 bits (668), Expect = 8.350e-76 Identity = 144/292 (49.32%), Postives = 181/292 (61.99%), Query Frame = 2
Query: 1895 GGRYLA*ESATSVVGRKDSRFFTGAGSPKKILQ-----VEWFFRDGDRID-TNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
GG + + T+++ K G ++ + VEW +GD + + GKV VAKV+G CR +L GERTALN+++R SGV + R+V+QAR GW GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNH+ +AG I AV AK AGFSMKIEVE E+A+EAA AGAD+VMLDNFEP +LK+ + LK ++PH L+EASGGIT +T ++ VDV+SQG LT GYPCLDFSLKI
Sbjct: 34 GGFVVGEDEETALLLGKSEGVLAGVPFFTEVFRSLNCHVEWLLNEGDEVKPSGVPGGKVPVAKVTGKCRQLLLGERTALNILTRASGVTTQARRSVEQARSLGWNGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITKAVHKAKLAAGFSMKIEVECRRIEEAQEAAKAGADIVMLDNFEPEQLKATAAELKKQFPHLLIEASGGITPETLGQYVSPDVDVVSQGKLTQGYPCLDFSLKI 292
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: A0A1W0A7Q2_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7Q2_9STRA) HSP 1 Score: 259 bits (661), Expect = 6.830e-75 Identity = 140/255 (54.90%), Postives = 172/255 (67.45%), Query Frame = 2
Query: 1991 QVEWFFRDGDRID-TNTGDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
+VEW +G I+ + GKVVVAKV+G RNIL GERTALN+++R SG+A+ AV AR+ GW+GHVAGTRKTTPG FR+VEKY L+V G +THR+DLSQMVMLKDNH+ ++G I NAV+ AK AGFSMKIEVE E+A EAANAGAD+VMLDNFEP +LK + +LK+++PH ++EASGGIT+ T +L VDVISQG LT GY CLDFSLKI
Sbjct: 66 KVEWNLAEGSLIEPSKVASGKVVVAKVTGKVRNILLGERTALNILTRASGIATQAHAAVKAARDLGWQGHVAGTRKTTPG---------------------------------FRVVEKYALLVAGASTHRHDLSQMVMLKDNHVWASGSITNAVKKAKVAAGFSMKIEVECRKLEEAIEAANAGADIVMLDNFEPAQLKETAAKLKNQFPHLIIEASGGITSATMGQYLSPDVDVISQGKLTQGYSCLDFSLKI 287
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: M4BU94_HYAAE (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BU94_HYAAE) HSP 1 Score: 257 bits (656), Expect = 2.190e-74 Identity = 139/254 (54.72%), Postives = 169/254 (66.54%), Query Frame = 2
Query: 1994 VEWFFRDGDRIDTNTG-DGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
VEW ++GD + ++ GKVVVAKV+G CR +L GERTALN+++R SGVA++ R+VD R GW GHVAGTRKTTPG FRLVEKY L+V G +THR+DLSQMVMLKDNH+ +AG I AV AK AGFSMKIEVE E+A+EAA AGAD+VMLDNFEP +LK+ + LK ++PH L+EASGGIT T ++ VDV+SQG LT GY CLDFSLKI
Sbjct: 53 VEWLLQEGDEVQPSSVLSGKVVVAKVTGKCRQLLLGERTALNILTRASGVATAARRSVDLVRALGWNGHVAGTRKTTPG---------------------------------FRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITKAVHKAKLAAGFSMKIEVECRRLEEAQEAATAGADIVMLDNFEPEKLKATAAALKMQFPHLLIEASGGITPATLGQYVSQDVDVVSQGNLTQGYLCLDFSLKI 273
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Match: K3X4L5_GLOUD (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X4L5_GLOUD) HSP 1 Score: 257 bits (657), Expect = 2.910e-74 Identity = 138/255 (54.12%), Postives = 173/255 (67.84%), Query Frame = 2
Query: 1991 QVEWFFRDGDRIDTNT-GDGKVVVAKVSGSCRNILQGERTALNVISRCSGVASSTARAVDQAREHGWKGHVAGTRKTTPGNCTDHQYPHQISSFHQWRGSNMTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIANAVRAAKRVAGFSMKIEVEASNYEQAEEAANAGADVVMLDNFEPVELKSVSRRLKDEYPHTLLEASGGITAKTFHLFLIDSVDVISQGALTHGYPCLDFSLKI 2752
+VEW ++G +D +T GKVVVAKV+G CRNIL GERTALN+++R SG+A+ +VD AR GW+GHVAGTRKTTPG FR+VEKY L+V G +THR+DLSQMVMLKDNH+ +AG I AV+ A+R AGFSMKIEVE + ++A EAA AGAD+VMLDNFEP LK+ + LK ++PH L+EASGGIT +T L++ VD++SQG LT GY LDFSLKI
Sbjct: 70 KVEWLLKEGSVVDPSTVASGKVVVAKVTGKCRNILMGERTALNILTRASGIATQAKASVDIARGLGWRGHVAGTRKTTPG---------------------------------FRVVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITGAVQKAQRAAGFSMKIEVECRSLDEAVEAATAGADIVMLDNFEPEGLKATAATLKAQFPHLLIEASGGITPETLGLYVSPHVDIVSQGKLTQGYGFLDFSLKI 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1840.4512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1840.4512.1 >prot_H-paniculata_contig1840.4512.1 ID=prot_H-paniculata_contig1840.4512.1|Name=mRNA_H-paniculata_contig1840.4512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp MTCFASSKSLSGFRLVEKYGLVVGGGATHRYDLSQMVMLKDNHITSAGGIback to top mRNA from alignment at H-paniculata_contig1840:17865..24207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1840.4512.1 ID=mRNA_H-paniculata_contig1840.4512.1|Name=mRNA_H-paniculata_contig1840.4512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6343bp|location=Sequence derived from alignment at H-paniculata_contig1840:17865..24207- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1840:17865..24207- >mRNA_H-paniculata_contig1840.4512.1 ID=mRNA_H-paniculata_contig1840.4512.1|Name=mRNA_H-paniculata_contig1840.4512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig1840:17865..24207- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |