mRNA_H-paniculata_contig18343.4492.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI) HSP 1 Score: 601 bits (1549), Expect = 8.470e-209 Identity = 327/435 (75.17%), Postives = 343/435 (78.85%), Query Frame = 3
Query: 567 MAQREGGDGLAERLGGISLESVGPGEAKPPIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEAGGWLGHPATGQGGGGYAYALPGAGISSHMMGGMPGAYLPYGGAQAGGAPSQGSYVYYPYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAA---SRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
MAQR D +A+R+ I+LE + GEAK IGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISG+HRGCAFLTYCAR SADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVF+PYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGT AAAGRLGG++GSPGRH +GPHPEAGGW+GHP G G GY Y +PG +S HMM GMP + YGG QA GAP+QGSYVYYPY PG Y P G G YHSGPPSP R XXXXXX +RPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG
Sbjct: 1 MAQRSADDEVADRMANINLEGLAGGEAKSSIGPAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYG-MAYGGGQAPGAPAQGSYVYYPYGAPG-YPPQPGGPGQ-------------------YHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 414
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A836CBS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA) HSP 1 Score: 310 bits (794), Expect = 4.960e-95 Identity = 211/403 (52.36%), Postives = 251/403 (62.28%), Query Frame = 3
Query: 669 GLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPH-PEAGGWLGHPATG----QGGGGYAYALPGAGISSHMMGGMPGAYLPYGGAQAGGAPSQGSYVYYPYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
GL+ KD DAIKLF+GQ+PK ME + L P+F EFGE+FDLA+IRDK +GMHRGCAFLTYC R +A+AA AALHG R+L QN LQVRPAEG E++NKLFVGM PK+ANE E+R VFS +G LRE+H+IRN DG+NKGCAFVK+ R+ A+ AI+ALHE+YT++G PRPLVVKFADN + L G + PG + P+ GG LG+ A QG Y+Y G G S G + YP VPP G S XXXXXXXXXXXXXXXXXXX G PS L V +RP EGP +NLFIYHLP DL+DADLATAFA FG+V+SAKVY+DR + ESKGFG
Sbjct: 19 GLLRKDPDAIKLFIGQVPKTMEADALLPLFSEFGEVFDLAIIRDKQTGMHRGCAFLTYCTRAAAEAATAALHGNRKLVGSQNALQVRPAEGHNERDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLEGAPRPLVVKFADNNKRNVVPR-MLTGPI--PGGTDSSPYWSPPGGALGNLALAGGSQQGAPMYSY---GGGYXXXXXXXXXXXXXXXXXXXXXXXGSSGQQMGYPPVPPAGP------SAXXXXXXXXXXXXXXXXXXXVPQGGGPSAL------------------------------VEELTPARPQEGPAKSNLFIYHLPHDLTDADLATAFASFGNVISAKVYVDRVTNESKGFG 379
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA) HSP 1 Score: 284 bits (726), Expect = 5.330e-84 Identity = 217/478 (45.40%), Postives = 259/478 (54.18%), Query Frame = 3
Query: 663 PAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAG--------RLGG----------------------MVGSPGRHSAGPHPE------------AGGWLGHPA---TGQG-GGGYAYALPGAGISSH------MMG--GMPGA----------------------YLPYGGAQAGGAPSQGSYVYYP-YVPPGGYQG-GPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
PAGL KD DAIKLFVGQIPK M E+ LRP F E+G IF+L VIRDK SGMHRGCAFLTYC + +A AA ALH + +L QN LQVRPA+ E+ENKLFVGM PK+ +E + +F+P+G ++EIH+IR+ +G KGCAF+K+ R SA+ AIEAL+E+ ++G RP+VV+FA++KR G R GG MV P HS HP AGG LG TG+G G PG G S + M+G G P A YLPYG +A Y+YYP Y PGG QG G GXXXXXXXXXXXXX Y G P +R H A G S+P EGP GANLFIYHLP DL+DADLATAF PFG V+SAKVY+D+ SGESKGFG
Sbjct: 25 PAGLT-KDGDAIKLFVGQIPKDMGEDALRPFFAEYGPIFELTVIRDKTSGMHRGCAFLTYCTKEAAQAASLALHNKLKLPDAQNALQVRPADLHTERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKRSGEGGQGAGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSL--HPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPYSGAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRAP------PYLYYPPYFGPGGPQGHGAAADGXXXXXXXXXXXXXGSPFV--YGGGVPGGMRVNTAVGAP---------HGAGHAGAFASRGGXXXGSKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFG 482
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A7S3UU89_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU89_HETAK) HSP 1 Score: 269 bits (687), Expect = 1.230e-82 Identity = 130/192 (67.71%), Postives = 156/192 (81.25%), Query Frame = 3
Query: 663 PAGLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGG 1238
P GL+ KD+DAIKLFVGQIP+ ++E LRPVFE +G +FDL VIRDK +G HR CAFLTYC R SA+ AIA LHGQ++L QNPLQVRPAEGQAE+ENKLFVGM P++A E ++RAVF+P+G LRE+HVIR DG NKGCAFVK+ R++AL AI ALHE++TM+GGPR LVVKFADNKRG G +GG
Sbjct: 29 PEGLLEKDADAIKLFVGQIPRELDEAALRPVFEAYGPVFDLMVIRDKQTGAHRRCAFLTYCHRESAEKAIAELHGQKKLPNAQNPLQVRPAEGQAERENKLFVGMVPRAAAEGDLRAVFAPFGALREVHVIRQPDGANKGCAFVKFAERRAALAAIAALHERHTMEGGPRALVVKFADNKRGGERGVGGVGG 220
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A836CK81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK81_9STRA) HSP 1 Score: 279 bits (713), Expect = 2.470e-82 Identity = 203/398 (51.01%), Postives = 242/398 (60.80%), Query Frame = 3
Query: 669 GLIHKDSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEAGGWLGHPATGQGGGGYAYALPGAGISSHMMGGMPGAYLPYGGAQAGGAPSQGSYVYYPYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
GL+ KD DAIKLFVGQIPKHME + L P+F EFG+IFDL +IRDK +G+HRGCAFLT+C R SA+AAI ALHG R+L N LQVR AE QAE+E KLFVGM +A+E+++R +FS YG +RE+H+IRN DG+NKGCAFVKY +R+ A AI+AL+EQ TM+G PRPL+V+FAD+ + G HP G P G A A P A ++ PYG +GGA Y P Y G XXXXXXXXXXXXXXXXXXX XXXXXXX HP SRP EGP +NLFIYH P DL+DADLATAFA FG+V+SAKVY+DR + ESKGFG
Sbjct: 9 GLLQKDPDAIKLFVGQIPKHMESDALLPLFSEFGDIFDLTIIRDKQTGVHRGCAFLTFCTRASAEAAIQALHGNRKLAGAVNALQVRAAEAQAEREVKLFVGMVASTADEEDVRGIFSVYGEIREVHIIRNADGSNKGCAFVKYASREHAAAAIDALNEQMTMEGAPRPLLVRFADSSK--------------------RGAHPLRGAGDSSPYWSPAAG--AIASPAASATN-----------PYG-EDSGGA--------YAAAAPADYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXRDHP------------------------SRPQEGPARSNLFIYHWPADLTDADLATAFASFGNVISAKVYMDRLTNESKGFG 339
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.140e-80 Identity = 174/408 (42.65%), Postives = 223/408 (54.66%), Query Frame = 3
Query: 684 DSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQ------AEQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGM-VGSPGRHSAGPHPEAGGWLGHPATGQGGGGYAYALPGAGISSHMMG------GMPGAYLPYGGAQAGGAPSQGSYVYYPYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPR--SPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
D + +KLFVGQ+PK + EEDL P F EFG I +L VIRDK +G HRGCAF+TY + SA+ LH Q G+ P+Q+RPA G EQENKLF+GM ++A+E+ IR VF+ +G +REI++IRN DG+NKGCAF+KY+ R SAL AI L+ + M G RPL+VKFAD K A + +GSPGR +G +P + Y +P + + G+P Y Y Q G + SQ +++Y P P GY P G PS HP SP +Y D G +RP EGPPGANLFIYHLP DL+DADLATAFAPFG+V+SAKVY+D+ +GESKGFG
Sbjct: 122 DDEPVKLFVGQVPKSLAEEDLFPTFSEFGPIKELTVIRDKHTGQHRGCAFVTYWSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPGRGQSGHNPSS----------------PYFIPPVPVYPNYQAQRAPPIGIPHQYSQYP-PQYGQSSSQ-NFMYVP-TGPYGYPSAPFNHNQMGNHSGGGSGAQQP-------GGAPSAFEPVPNPNHAVHPSRGSPRTSPAPGKVYQHRSD-GPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFG 502
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.750e-76 Identity = 174/409 (42.54%), Postives = 218/409 (53.30%), Query Frame = 3
Query: 690 DAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEA------GGWLGHPATGQGGGGYAYALPGAGISSHMMGGMP--GAYLPYGGAQAGGAPSQGS-------YVYYPYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
DA+KLFVGQ+P+ MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C R +A+AAI LH Q L NPLQVRPAEGQA QE+KLF+GM PK A+E IR VF+P+G + EI+++R+ G +KGCAF+K+ R SA AIEA + YTM G PLVVKFAD++R A R+ A A GG + P Q I M M GA G G +PS + Y Y + GY G P G PP PL + +A G AA++ EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFG
Sbjct: 90 DAVKLFVGQVPRTMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCTRAAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRRQRIQRA-----------RNQAATAAAAYWQLPPGGTIPFPQLQQ-------------IQQQYMQQMQAFGAQALAGQMSPGSSPSPAANPAAFMYYNQYAFAAASGYTGFPSGV------------------------APPFPLDAL-----------------ATAVPGAAAASGARAATQ-LEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFG 432
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A0P1AE29_PLAHL (Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE29_PLAHL) HSP 1 Score: 260 bits (664), Expect = 4.120e-76 Identity = 169/398 (42.46%), Postives = 221/398 (55.53%), Query Frame = 3
Query: 687 SDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEAGGWLGHPATGQGGGGYAYALPGAGISSHMMGGMPGAYLPYGGAQAGGAPSQGSYVYY-PYVPPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYD--SAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
S +KLFVGQ+P++MEE+DLRPV E +G++ DL +IRDKI+G HRGCAF +Y R +A+ A+ LH + L NPLQVRPAEGQA QE+KLF+GM PK+A+E IR VF YGT+ E++++R+ G +KGCAF+K+ R SAL AI+ ++ TM G PLVVKFAD++R A + ++ P P G L P Q Y + G+ + + G P GGA G A S++YY PY G+ GP G P S + + G V + E V A + EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKVY+D+ +GESKGFG
Sbjct: 29 SGPVKLFVGQVPRNMEEDDLRPVLEVYGQLEDLMIIRDKITGAHRGCAFASYFTRDAAEKAVIELHNKVTLPHSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEGAIREVFELYGTIEEVYILRHPSTGLSKGCAFLKFKDRTSALAAIDDVNGNITMDRGTSPLVVKFADSRRQRLQRARNMAAAA-----NAYWPLPPGAG-LAFPQLQQLQQQYMQQMQAFGVQVGLNPAVAGLESPVGGAGGGPASPTNSFLYYNPY----GFAAGPAG-----------------------------PYGFNGLPNVGAAISSYDMQSGGLVEMQGQAVEAVKAARTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFG 387
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: T0QG38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG38_SAPDV) HSP 1 Score: 258 bits (660), Expect = 4.680e-76 Identity = 174/403 (43.18%), Postives = 226/403 (56.08%), Query Frame = 3
Query: 690 DAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEA------GGWLGHPATGQGGGGYAYALPGAGISSHMMGGMPGAYLPYGGAQAGGAPSQGSYVYY-PYV--PPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGVAAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
DA+KLFVGQ+P++MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C+R +A+AAI LH Q L NPLQVRPAEGQA QE+KLF+GM PK A+E IR VF+ +G + EI+++R+ G +KGCAF+KY R +A AI+A + YTM+ G PLVVKFAD++R A R+ A A GG + P Q Y + G + + G P GA A + +++YY PY GY P G+ PP PL P S V +A G AA++ EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFG
Sbjct: 37 DAVKLFVGQVPRNMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCSRDAAEAAIETLHNQVTLPLSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADESSIREVFASHGPIEEIYILRHPATGQSKGCAFLKYKDRHAASAAIDAYNGTYTMERGTAPLVVKFADSRRQRIQRA-----------RNQAATAAAAYWQLPPGGTIPFPQLQQIQQQYMQQMQAFGAQA-----LAGQSSP--GASPSPAANPAAFMYYNPYAFAAATGYPSFPTGA------------------------APPFPLDALASAV----PSS--------VAAVAAASSGARAATQ-LEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFG 384
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA) HSP 1 Score: 258 bits (658), Expect = 7.360e-76 Identity = 176/411 (42.82%), Postives = 221/411 (53.77%), Query Frame = 3
Query: 690 DAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGMHRGCAFLTYCARPSADAAIAALHGQRRLDRGQNPLQVRPAEGQA--EQENKLFVGMAPKSANEDEIRAVFSPYGTLREIHVIRNQ-DGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTAAAAGRLGGMVGSPGRHSAGPHPEA------GGWLGHPATGQGGGGYAYALPGAGISSHMMGGMP--GAYLPYGGAQAGGAP----SQGSYVYY-PYV--PPGGYQGGPVGSGXXXXXXXXXXXXXXXXXXXHYHSGPPSPLRXXXXXXXXXHPRSPEHRHTGRVMYDSAEDVGV--AAASRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFG 1862
DA+KLFVGQ+P+ MEE DLRP+ E FG ++D+ +IRDK+SG HRGCAF+T+C R +ADAAI LH Q L NPLQVRPAEGQA QE+KLF+GM PK A+E IR VF+P+G + EI+++R+ G +KGCAF+KY R SA AIEA + YTM G PLVVKFAD++R A R+ A A GG + P Q I M M GA G GG+P + +++YY PY GY P G P+P P P + +G+ A A+ EGP GANLFIYHLP DL+DADLATAFAPFG V+SAKV++D+ +GESKGFG
Sbjct: 34 DAVKLFVGQVPRSMEEADLRPILEAFGPLYDIVIIRDKVSGAHRGCAFVTFCTRDAADAAIETLHNQVTLPMSSNPLQVRPAEGQAGASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRA-----------RNQAATAAAAYWQLPPGGTIPFPQIQQ-------------IQQQYMQQMQVFGAQALGGQTSPGGSPIPATNPATFMYYNPYAFAAASGYNSFPPAGG-------------------------PAPF-----------PLDP--------LATPMPGMGLSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFG 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18343.4492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18343.4492.1 >prot_H-paniculata_contig18343.4492.1 ID=prot_H-paniculata_contig18343.4492.1|Name=mRNA_H-paniculata_contig18343.4492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=432bp MAQREGGDGLAERLGGISLESVGPGEAKPPIGPAGLIHKDSDAIKLFVGQback to top mRNA from alignment at H-paniculata_contig18343:1441..5060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18343.4492.1 ID=mRNA_H-paniculata_contig18343.4492.1|Name=mRNA_H-paniculata_contig18343.4492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3620bp|location=Sequence derived from alignment at H-paniculata_contig18343:1441..5060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18343:1441..5060+ >mRNA_H-paniculata_contig18343.4492.1 ID=mRNA_H-paniculata_contig18343.4492.1|Name=mRNA_H-paniculata_contig18343.4492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2592bp|location=Sequence derived from alignment at H-paniculata_contig18343:1441..5060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |