prot_H-paniculata_contig1829.4472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1829.4472.1
Unique Nameprot_H-paniculata_contig1829.4472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
BLAST of mRNA_H-paniculata_contig1829.4472.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.260e-57
Identity = 97/170 (57.06%), Postives = 128/170 (75.29%), Query Frame = 0
Query:    6 GSSPHMPILHGISLAPLVVVVLVCVVVEVWAGVVNWRASRVTRQEASMLERRQTLKAGVVKTNYTSTFVENSKLKRLLLKIEKDIEQLQLEKAKREKSAGRVTRTLMWGVYGSLVVVMWGHPLIHLSPEYLFPSTRMHAFSGGGEAGCVGALSVIAMFRFGLASRFSVTA 175
            G+SPH+P +  +S+  L +VV++C +VEV AG V W+ SRVTR EA+++ +RQTL+ GV KTNYT+TFVENSKLKRLLLK EKD+E++Q  + +R KS  +  R +   VYGS+VV+MWG PLI  SP+YL+PS+  HA SGG  AG VGALS++AMF FGL  R S +A
Sbjct:    6 GASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA 175          
BLAST of mRNA_H-paniculata_contig1829.4472.1 vs. uniprot
Match: A0A835YKR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 9.840e-24
Identity = 65/168 (38.69%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    8 SPHMPILHGISLAPLVVVVLVCVVVEVWAGVVNWRASRVTRQEASMLERRQTLKAGVVKTNYTSTFVENSKLKRLLLKIEKDIEQLQLEKAKREKSAGRVTRTLMWGVYGSLVVVMWGHPLIHLSPEYLFPSTRMHAFSGGGEAGC----VGALSVIAMFRFGLASRF 171
            S  +P +  I+   L++ +LVCV+VE+ +G+ +  A R T+ E +  E    LK  +VKTNY   FVENSKL+R L+K+EK++E+L+ E+A R     R TR L    YG+LV   WG   I  +P Y+ P   + A +GG   G     V    V+ +F +GL  RF
Sbjct:    4 SAALPAVLAINPVGLILAILVCVIVELISGIAHAMAGRRTQAEVTYSEDVALLKVEIVKTNYPEKFVENSKLQRQLIKVEKELERLRGERAARRTKVQRWTRWLRLAAYGALVAAHWGQTAIRFTPAYVTP---LGAVAGGPLQGTPQGGVSIAGVVVLFWWGLGGRF 168          
BLAST of mRNA_H-paniculata_contig1829.4472.1 vs. uniprot
Match: W4FTR7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTR7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 6.150e-5
Identity = 42/126 (33.33%), Postives = 63/126 (50.00%), Query Frame = 0
Query:   22 LVVVVLVCVVVEVWAGVVNWRASRVTRQEASMLERRQTLKAGVVKTNYTSTFVENSKLKRLLLKIEKDIEQLQLEK---AKREKSAGRVTRTLMWGVYGSLVVVMWGHPLIHLSPEYLFPSTRMHA 144
            L+V+ L+CVVVEV   V+  R SR T+ E ++  +   L     K N    FVE+SKL R +  ++K  + L +E+   A   +  G +   L+      +VVV W  PL+   P  L P  R+ A
Sbjct:   10 LLVLTLLCVVVEVLLHVLQTRGSRPTQAELALQRQHAVLAVQAKKLNSVDMFVEHSKLVRQMNTVKKQEQTLAVERLAHAAVPRYFGYIQPVLL----AIVVVVFWSSPLVVFPPGRLMPVERLVA 131          
BLAST of mRNA_H-paniculata_contig1829.4472.1 vs. uniprot
Match: A0A6G0XM42_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM42_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 8.110e-5
Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 0
Query:   10 HMPILHGISLAPLVVVVLVCVVVEVWAGVVNWRASRVTRQEASMLERRQTLKAGVVKTNYTSTFVENSKLKRLLLKIEKDIEQLQLEKAKREKS---AGRVTRTLMWGVYGSLVVVMWGHPLIHLSPEYLFPSTRMHA 144
             M ++  I  + ++++ L+CV+VE     +  R SR + QE ++ +   TL A   K N    FVE+SKL R +  ++K  + L +E+  +       G V   L+  V    VV  W  PL+   P +L P  R+ A
Sbjct:   18 EMDVIQEIDASGILILTLLCVLVEFALHFLQLRGSRPSAQEIALQKEHATLAAKAKKLNSVDMFVEHSKLLRQMNTVKKQEQTLAVERIAKSSVPGFVGYVQPLLLIAV----VVYFWSSPLVVFPPGHLMPVERLVA 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1829.4472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G9E7_ECTSI3.260e-5757.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKR9_9STRA9.840e-2438.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W4FTR7_9STRA6.150e-533.33Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A6G0XM42_9STRA8.110e-529.71Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..38
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
NoneNo IPR availableTMHMMTMhelixcoord: 107..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1829contigH-paniculata_contig1829:7515..10224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1829.4472.1mRNA_H-paniculata_contig1829.4472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1829 6989..11008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1829.4472.1 ID=prot_H-paniculata_contig1829.4472.1|Name=mRNA_H-paniculata_contig1829.4472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MSIVGGSSPHMPILHGISLAPLVVVVLVCVVVEVWAGVVNWRASRVTRQE
ASMLERRQTLKAGVVKTNYTSTFVENSKLKRLLLKIEKDIEQLQLEKAKR
EKSAGRVTRTLMWGVYGSLVVVMWGHPLIHLSPEYLFPSTRMHAFSGGGE
AGCVGALSVIAMFRFGLASRFSVTA*
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